RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 DEFB119Q8N690 84 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 HEXDCQ8WVB3 486 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 SNX19Q92543 992 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 FUBP1Q96AE4 644 aaKnown RBP16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 CCDC97Q96F63 343 aaPredicted RBP16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 SERAC1Q96JX3 654 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 RBBP8Q99708 897 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 APOOQ9BUR5 198 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 BOCQ9BWV1 1114 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 RHOJQ9H4E5 214 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 ZNF446Q9NWS9 450 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 EURLQ9NYK6 297 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 TXNDC16Q9P2K2 825 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 CA5BQ9Y2D0 317 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 PCDHGA2Q9Y5H1 932 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 MEI4A8MW99 385 aa16.42■□□□□ 0.22
CCDC90B-202ENST00000455220 H0Y8X5 98 aa16.42■□□□□ 0.22
CCDC90B-202ENST00000455220 OR1I1O60431 355 aa16.42■□□□□ 0.22
CCDC90B-202ENST00000455220 LILRB5O75023 590 aa16.42■□□□□ 0.22
CCDC90B-202ENST00000455220 FAM155BO75949 473 aa16.42■□□□□ 0.22
CCDC90B-202ENST00000455220 INHBAP08476 426 aa16.42■□□□□ 0.22
CCDC90B-202ENST00000455220 MYCLP1P12525 358 aaPredicted RBP16.42■□□□□ 0.22
CCDC90B-202ENST00000455220 ZNF7P17097 686 aaPredicted RBP16.42■□□□□ 0.22
CCDC90B-202ENST00000455220 RPS3P23396 243 aaKnown RBP eCLIP16.42■□□□□ 0.22
CCDC90B-202ENST00000455220 NSG1P42857 185 aa16.42■□□□□ 0.22
CCDC90B-202ENST00000455220 LIMK2P53671 638 aa16.42■□□□□ 0.22
CCDC90B-202ENST00000455220 CLDN2P57739 230 aa16.42■□□□□ 0.22
CCDC90B-202ENST00000455220 KIAA1024LP59773 190 aa16.42■□□□□ 0.22
CCDC90B-202ENST00000455220 YPEL5P62699 121 aa16.42■□□□□ 0.22
CCDC90B-202ENST00000455220 PLK5Q496M5 336 aa16.42■□□□□ 0.22
CCDC90B-202ENST00000455220 CNSTQ6PJW8 725 aa16.42■□□□□ 0.22
CCDC90B-202ENST00000455220 C1orf216Q8TAB5 229 aa16.42■□□□□ 0.22
CCDC90B-202ENST00000455220 FAM174AQ8TBP5 190 aa16.42■□□□□ 0.22
CCDC90B-202ENST00000455220 EPS8L3Q8TE67 593 aaKnown RBP16.42■□□□□ 0.22
CCDC90B-202ENST00000455220 LGR4Q9BXB1 951 aa16.42■□□□□ 0.22
CCDC90B-202ENST00000455220 P2RY12Q9H244 342 aa16.42■□□□□ 0.22
CCDC90B-202ENST00000455220 PHPT1Q9NRX4 125 aaPredicted RBP16.42■□□□□ 0.22
CCDC90B-202ENST00000455220 PSMC3IPQ9P2W1 217 aaPredicted RBP16.42■□□□□ 0.22
CCDC90B-202ENST00000455220 CORO1CQ9ULV4 474 aaPredicted RBP16.42■□□□□ 0.22
CCDC90B-202ENST00000455220 OR1A2Q9Y585 309 aa16.42■□□□□ 0.22
CCDC90B-202ENST00000455220 OAS3Q9Y6K5 1087 aaKnown RBP16.42■□□□□ 0.22
CCDC90B-202ENST00000455220 IKBKGQ9Y6K9 419 aa16.42■□□□□ 0.22
CCDC90B-202ENST00000455220 SLCO1B1Q9Y6L6 691 aa16.42■□□□□ 0.22
CCDC90B-202ENST00000455220 FANCMQ8IYD8 2048 aa16.41■□□□□ 0.22
CCDC90B-202ENST00000455220 PRMT5O14744 637 aaPredicted RBP16.41■□□□□ 0.22
CCDC90B-202ENST00000455220 CDH16O75309 829 aa16.41■□□□□ 0.22
CCDC90B-202ENST00000455220 SERPINB9P50453 376 aa16.41■□□□□ 0.22
CCDC90B-202ENST00000455220 TRIM74Q86UV6 250 aa16.41■□□□□ 0.22
CCDC90B-202ENST00000455220 CNPY4Q8N129 248 aa16.41■□□□□ 0.22
CCDC90B-202ENST00000455220 GDAP1Q8TB36 358 aa16.41■□□□□ 0.22
CCDC90B-202ENST00000455220 MRRFQ96E11 262 aaKnown RBP16.41■□□□□ 0.22
CCDC90B-202ENST00000455220 ZC3H10Q96K80 434 aaKnown RBP16.41■□□□□ 0.22
CCDC90B-202ENST00000455220 BIRC8Q96P09 236 aa16.41■□□□□ 0.22
CCDC90B-202ENST00000455220 TRIM39Q9HCM9 518 aa16.41■□□□□ 0.22
CCDC90B-202ENST00000455220 GPR27Q9NS67 375 aa16.41■□□□□ 0.22
CCDC90B-202ENST00000455220 EIF2B4Q9UI10 523 aaKnown RBP16.41■□□□□ 0.22
CCDC90B-202ENST00000455220 TNRC6BQ9UPQ9 1833 aaKnown RBP16.41■□□□□ 0.22
CCDC90B-202ENST00000455220 PIKFYVEQ9Y2I7 2098 aa16.4■□□□□ 0.22
CCDC90B-202ENST00000455220 CACNA1HO95180 2353 aa16.4■□□□□ 0.22
CCDC90B-202ENST00000455220 A6NNZ2 444 aa16.4■□□□□ 0.22
CCDC90B-202ENST00000455220 CFAP99D6REC4 459 aa16.4■□□□□ 0.22
CCDC90B-202ENST00000455220 RASGRF2O14827 1237 aa16.4■□□□□ 0.22
CCDC90B-202ENST00000455220 VEGFDO43915 354 aa16.4■□□□□ 0.22
CCDC90B-202ENST00000455220 MTX2O75431 263 aa16.4■□□□□ 0.22
CCDC90B-202ENST00000455220 SASH3O75995 380 aa16.4■□□□□ 0.22
CCDC90B-202ENST00000455220 ESR1P03372 595 aa16.4■□□□□ 0.22
CCDC90B-202ENST00000455220 RALBP11234 206 aa16.4■□□□□ 0.22
CCDC90B-202ENST00000455220 SPRP35270 261 aaPredicted RBP16.4■□□□□ 0.22
CCDC90B-202ENST00000455220 RABIFP47224 123 aa16.4■□□□□ 0.22
CCDC90B-202ENST00000455220 RACK1P63244 317 aaKnown RBP16.4■□□□□ 0.22
CCDC90B-202ENST00000455220 TMEM115Q12893 351 aaPredicted RBP16.4■□□□□ 0.22
CCDC90B-202ENST00000455220 WDR45BQ5MNZ6 344 aa16.4■□□□□ 0.22
CCDC90B-202ENST00000455220 ADGRG6Q86SQ4 1221 aa16.4■□□□□ 0.22
CCDC90B-202ENST00000455220 RIBC1Q8N443 379 aaPredicted RBP16.4■□□□□ 0.22
CCDC90B-202ENST00000455220 VPS39Q96JC1 886 aa16.4■□□□□ 0.22
CCDC90B-202ENST00000455220 SLC6A18Q96N87 628 aa16.4■□□□□ 0.22
CCDC90B-202ENST00000455220 ZCCHC2Q9C0B9 1178 aaKnown RBP16.4■□□□□ 0.22
CCDC90B-202ENST00000455220 CRYL1Q9Y2S2 319 aa16.4■□□□□ 0.22
CCDC90B-202ENST00000455220 PCDHB1Q9Y5F3 818 aa16.4■□□□□ 0.22
CCDC90B-202ENST00000455220 PRSS21Q9Y6M0 314 aa16.4■□□□□ 0.22
CCDC90B-202ENST00000455220 WDFY4Q6ZS81 3184 aa16.4■□□□□ 0.22
CCDC90B-202ENST00000455220 A0A1W2PR77 199 aa16.39■□□□□ 0.21
CCDC90B-202ENST00000455220 UBA6A0AVT1 1052 aaPredicted RBP16.39■□□□□ 0.21
CCDC90B-202ENST00000455220 HMX2A2RU54 273 aa16.39■□□□□ 0.21
CCDC90B-202ENST00000455220 GPR89AB7ZAQ6 455 aa16.39■□□□□ 0.21
CCDC90B-202ENST00000455220 CACNB4O00305 520 aaPredicted RBP16.39■□□□□ 0.21
CCDC90B-202ENST00000455220 SGTAO43765 313 aa16.39■□□□□ 0.21
CCDC90B-202ENST00000455220 AP2A2O94973 939 aa16.39■□□□□ 0.21
CCDC90B-202ENST00000455220 ITGA2BP08514 1039 aa16.39■□□□□ 0.21
CCDC90B-202ENST00000455220 GPR89BP0CG08 455 aa16.39■□□□□ 0.21
CCDC90B-202ENST00000455220 ATP1B2P14415 290 aaPredicted RBP16.39■□□□□ 0.21
CCDC90B-202ENST00000455220 MSH3P20585 1137 aa16.39■□□□□ 0.21
CCDC90B-202ENST00000455220 CNTFP26441 200 aa16.39■□□□□ 0.21
CCDC90B-202ENST00000455220 AKT1P31749 480 aa16.39■□□□□ 0.21
CCDC90B-202ENST00000455220 ABCG1P45844 678 aa16.39■□□□□ 0.21
CCDC90B-202ENST00000455220 SLCO1A2P46721 670 aa16.39■□□□□ 0.21
CCDC90B-202ENST00000455220 NFATC4Q14934 902 aa16.39■□□□□ 0.21
CCDC90B-202ENST00000455220 CTSL3PQ5NE16 218 aa16.39■□□□□ 0.21
CCDC90B-202ENST00000455220 ZNF648Q5T619 568 aaPredicted RBP16.39■□□□□ 0.21
CCDC90B-202ENST00000455220 ZNF549Q6P9A3 640 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms