RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 FKBPLQ9UIM3 349 aa24.57■■□□□ 1.52
MSH2-203ENST00000454849 APPL1Q9UKG1 709 aa24.57■■□□□ 1.52
MSH2-203ENST00000454849 DNAJC16Q9Y2G8 782 aa24.57■■□□□ 1.52
MSH2-203ENST00000454849 ZZEF1O43149 2961 aa24.57■■□□□ 1.52
MSH2-203ENST00000454849 ACACAQ13085 2346 aa24.56■■□□□ 1.52
MSH2-203ENST00000454849 C2orf81A6NN90 581 aa24.56■■□□□ 1.52
MSH2-203ENST00000454849 PPM1DO15297 605 aa24.56■■□□□ 1.52
MSH2-203ENST00000454849 CDK14O94921 469 aa24.56■■□□□ 1.52
MSH2-203ENST00000454849 FGGP02679 453 aa24.56■■□□□ 1.52
MSH2-203ENST00000454849 ZSCAN5DPP0CG00 497 aa24.56■■□□□ 1.52
MSH2-203ENST00000454849 PDX1P52945 283 aa24.56■■□□□ 1.52
MSH2-203ENST00000454849 LRP8Q14114 963 aa24.56■■□□□ 1.52
MSH2-203ENST00000454849 C3orf38Q5JPI3 329 aa24.56■■□□□ 1.52
MSH2-203ENST00000454849 PDPK2PQ6A1A2 396 aa24.56■■□□□ 1.52
MSH2-203ENST00000454849 USP53Q70EK8 1073 aa24.56■■□□□ 1.52
MSH2-203ENST00000454849 GLIS1Q8NBF1 620 aa24.56■■□□□ 1.52
MSH2-203ENST00000454849 FAM96AQ9H5X1 160 aa24.56■■□□□ 1.52
MSH2-203ENST00000454849 RMI1Q9H9A7 625 aa24.56■■□□□ 1.52
MSH2-203ENST00000454849 PRDM8Q9NQV8 689 aa24.56■■□□□ 1.52
MSH2-203ENST00000454849 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.56■■□□□ 1.52
MSH2-203ENST00000454849 SATB2Q9UPW6 733 aa24.56■■□□□ 1.52
MSH2-203ENST00000454849 CCDC78A2IDD5 438 aa24.55■■□□□ 1.52
MSH2-203ENST00000454849 NUDT21O43809 227 aaKnown RBP24.55■■□□□ 1.52
MSH2-203ENST00000454849 GABREP78334 506 aa24.55■■□□□ 1.52
MSH2-203ENST00000454849 B4GALNT1Q00973 533 aa24.55■■□□□ 1.52
MSH2-203ENST00000454849 TMEM115Q12893 351 aaPredicted RBP24.55■■□□□ 1.52
MSH2-203ENST00000454849 SEPT6Q14141 434 aa24.55■■□□□ 1.52
MSH2-203ENST00000454849 RTP5Q14D33 572 aa24.55■■□□□ 1.52
MSH2-203ENST00000454849 NKAIN2Q5VXU1 208 aa24.55■■□□□ 1.52
MSH2-203ENST00000454849 TMPRSS9Q7Z410 1059 aa24.55■■□□□ 1.52
MSH2-203ENST00000454849 ZNF547Q8IVP9 402 aa24.55■■□□□ 1.52
MSH2-203ENST00000454849 BRSK1Q8TDC3 778 aa24.55■■□□□ 1.52
MSH2-203ENST00000454849 SLC37A2Q8TED4 501 aa24.55■■□□□ 1.52
MSH2-203ENST00000454849 RDH14Q9HBH5 336 aa24.55■■□□□ 1.52
MSH2-203ENST00000454849 ETNK1Q9HBU6 452 aa24.55■■□□□ 1.52
MSH2-203ENST00000454849 EPB41L5Q9HCM4 733 aa24.55■■□□□ 1.52
MSH2-203ENST00000454849 TRMT1Q9NXH9 659 aaKnown RBP24.55■■□□□ 1.52
MSH2-203ENST00000454849 UNC13CQ8NB66 2214 aa24.55■■□□□ 1.52
MSH2-203ENST00000454849 COL27A1Q8IZC6 1860 aaPredicted RBP24.55■■□□□ 1.52
MSH2-203ENST00000454849 KIF26BQ2KJY2 2108 aa24.55■■□□□ 1.52
MSH2-203ENST00000454849 ANKRD11Q6UB99 2663 aaPredicted RBP24.54■■□□□ 1.52
MSH2-203ENST00000454849 D6RAR5 112 aa24.54■■□□□ 1.52
MSH2-203ENST00000454849 TCEA3O75764 348 aa24.54■■□□□ 1.52
MSH2-203ENST00000454849 SEPT7Q16181 437 aaKnown RBP24.54■■□□□ 1.52
MSH2-203ENST00000454849 INSCQ1MX18 579 aa24.54■■□□□ 1.52
MSH2-203ENST00000454849 TRAPPC5Q8IUR0 188 aa24.54■■□□□ 1.52
MSH2-203ENST00000454849 KLHDC8BQ8IXV7 354 aa24.54■■□□□ 1.52
MSH2-203ENST00000454849 ZNF398Q8TD17 642 aa24.54■■□□□ 1.52
MSH2-203ENST00000454849 DCBLD2Q96PD2 775 aa24.54■■□□□ 1.52
MSH2-203ENST00000454849 PPP1R2P1Q96PQ5 205 aa24.54■■□□□ 1.52
MSH2-203ENST00000454849 VPS35Q96QK1 796 aa24.54■■□□□ 1.52
MSH2-203ENST00000454849 LRRC40Q9H9A6 602 aa24.54■■□□□ 1.52
MSH2-203ENST00000454849 URB1O60287 2271 aaKnown RBP24.53■■□□□ 1.52
MSH2-203ENST00000454849 CHUKO15111 745 aa24.53■■□□□ 1.52
MSH2-203ENST00000454849 TLX3O43711 291 aaPredicted RBP24.53■■□□□ 1.52
MSH2-203ENST00000454849 ZNF189O75820 626 aaPredicted RBP24.53■■□□□ 1.52
MSH2-203ENST00000454849 PRAMEF1O95521 474 aa24.53■■□□□ 1.52
MSH2-203ENST00000454849 ZNF7P17097 686 aaPredicted RBP24.53■■□□□ 1.52
MSH2-203ENST00000454849 STIP1P31948 543 aaKnown RBP24.53■■□□□ 1.52
MSH2-203ENST00000454849 KCNJ1P48048 391 aa24.53■■□□□ 1.52
MSH2-203ENST00000454849 NFATC2Q13469 925 aa24.53■■□□□ 1.52
MSH2-203ENST00000454849 POU6F1Q14863 301 aa24.53■■□□□ 1.52
MSH2-203ENST00000454849 LONRF2Q1L5Z9 754 aa24.53■■□□□ 1.52
MSH2-203ENST00000454849 P3H1Q32P28 736 aa24.53■■□□□ 1.52
MSH2-203ENST00000454849 GPRC6AQ5T6X5 926 aa24.53■■□□□ 1.52
MSH2-203ENST00000454849 ZDHHC20Q5W0Z9 365 aa24.53■■□□□ 1.52
MSH2-203ENST00000454849 C19orf48Q6RUI8 117 aa24.53■■□□□ 1.52
MSH2-203ENST00000454849 DET1Q7L5Y6 550 aa24.53■■□□□ 1.52
MSH2-203ENST00000454849 LRRTM4Q86VH4 590 aa24.53■■□□□ 1.52
MSH2-203ENST00000454849 REXO1L1PQ8IX06 675 aa24.53■■□□□ 1.52
MSH2-203ENST00000454849 RASGEF1AQ8N9B8 481 aa24.53■■□□□ 1.52
MSH2-203ENST00000454849 RTP4Q96DX8 246 aa24.53■■□□□ 1.52
MSH2-203ENST00000454849 TTC25Q96NG3 672 aa24.53■■□□□ 1.52
MSH2-203ENST00000454849 ARNT2Q9HBZ2 717 aa24.53■■□□□ 1.52
MSH2-203ENST00000454849 KMOO15229 486 aa24.52■■□□□ 1.52
MSH2-203ENST00000454849 VEGFDO43915 354 aa24.52■■□□□ 1.52
MSH2-203ENST00000454849 CRTAMO95727 393 aa24.52■■□□□ 1.52
MSH2-203ENST00000454849 AP2A1O95782 977 aa24.52■■□□□ 1.52
MSH2-203ENST00000454849 PNLIPP16233 465 aa24.52■■□□□ 1.52
MSH2-203ENST00000454849 PPM1FP49593 454 aaPredicted RBP24.52■■□□□ 1.52
MSH2-203ENST00000454849 ZNF140P52738 457 aaPredicted RBP24.52■■□□□ 1.52
MSH2-203ENST00000454849 PEX6Q13608 980 aa24.52■■□□□ 1.52
MSH2-203ENST00000454849 GTF2H3Q13889 308 aa24.52■■□□□ 1.52
MSH2-203ENST00000454849 IYDQ6PHW0 289 aa24.52■■□□□ 1.52
MSH2-203ENST00000454849 OR52K1Q8NGK4 314 aa24.52■■□□□ 1.52
MSH2-203ENST00000454849 WDR48Q8TAF3 677 aa24.52■■□□□ 1.52
MSH2-203ENST00000454849 LRRC45Q96CN5 670 aa24.52■■□□□ 1.52
MSH2-203ENST00000454849 CCDC97Q96F63 343 aaPredicted RBP24.52■■□□□ 1.52
MSH2-203ENST00000454849 DNAJC1Q96KC8 554 aaKnown RBP24.52■■□□□ 1.52
MSH2-203ENST00000454849 FRMD8P1Q9BZ68 369 aaPredicted RBP24.52■■□□□ 1.52
MSH2-203ENST00000454849 ASB8Q9H765 288 aa24.52■■□□□ 1.52
MSH2-203ENST00000454849 SCHIP1Q9P0W5 487 aaPredicted RBP24.52■■□□□ 1.52
MSH2-203ENST00000454849 DKK4Q9UBT3 224 aa24.52■■□□□ 1.52
MSH2-203ENST00000454849 ZFC3H1O60293 1989 aaKnown RBP24.52■■□□□ 1.52
MSH2-203ENST00000454849 OR2AG2A6NM03 316 aa24.51■■□□□ 1.51
MSH2-203ENST00000454849 LDB2O43679 373 aa24.51■■□□□ 1.51
MSH2-203ENST00000454849 PPFIA2O75334 1257 aa24.51■■□□□ 1.51
MSH2-203ENST00000454849 SRP72O76094 671 aaKnown RBP24.51■■□□□ 1.51
MSH2-203ENST00000454849 MPSTP25325 297 aa24.51■■□□□ 1.51
MSH2-203ENST00000454849 RPL10P27635 214 aaKnown RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms