RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 C2orf54Q08AI8 447 aa27.67■■■□□ 2.02
SMARCC1-203ENST00000454240 ZCCHC8Q6NZY4 707 aaKnown RBP27.67■■■□□ 2.02
SMARCC1-203ENST00000454240 PCGF5Q86SE9 256 aa27.67■■■□□ 2.02
SMARCC1-203ENST00000454240 GDAP1Q8TB36 358 aa27.67■■■□□ 2.02
SMARCC1-203ENST00000454240 BOCQ9BWV1 1114 aa27.67■■■□□ 2.02
SMARCC1-203ENST00000454240 XAB2Q9HCS7 855 aaKnown RBP27.67■■■□□ 2.02
SMARCC1-203ENST00000454240 SLC2A6Q9UGQ3 507 aa27.67■■■□□ 2.02
SMARCC1-203ENST00000454240 ZNHIT2Q9UHR6 403 aa27.67■■■□□ 2.02
SMARCC1-203ENST00000454240 DOLKQ9UPQ8 538 aa27.67■■■□□ 2.02
SMARCC1-203ENST00000454240 SLC30A1Q9Y6M5 507 aa27.67■■■□□ 2.02
SMARCC1-203ENST00000454240 SPAARA0A1B0GVQ0 90 aa27.66■■■□□ 2.02
SMARCC1-203ENST00000454240 GRID2O43424 1007 aa27.66■■■□□ 2.02
SMARCC1-203ENST00000454240 CDK14O94921 469 aa27.66■■■□□ 2.02
SMARCC1-203ENST00000454240 ITGALP20701 1170 aa27.66■■■□□ 2.02
SMARCC1-203ENST00000454240 CTBSQ01459 385 aa27.66■■■□□ 2.02
SMARCC1-203ENST00000454240 GPR33Q49SQ1 333 aa27.66■■■□□ 2.02
SMARCC1-203ENST00000454240 C6orf132Q5T0Z8 1188 aa27.66■■■□□ 2.02
SMARCC1-203ENST00000454240 ARMC3Q5W041 872 aa27.66■■■□□ 2.02
SMARCC1-203ENST00000454240 MICALCLQ6ZW33 695 aa27.66■■■□□ 2.02
SMARCC1-203ENST00000454240 TAF8Q7Z7C8 310 aa27.66■■■□□ 2.02
SMARCC1-203ENST00000454240 SCG3Q8WXD2 468 aaKnown RBP27.66■■■□□ 2.02
SMARCC1-203ENST00000454240 APOLD1Q96LR9 279 aa27.66■■■□□ 2.02
SMARCC1-203ENST00000454240 SERPINB12Q96P63 405 aa27.66■■■□□ 2.02
SMARCC1-203ENST00000454240 TRIM51Q9BSJ1 452 aa27.66■■■□□ 2.02
SMARCC1-203ENST00000454240 KIFC1Q9BW19 673 aa27.66■■■□□ 2.02
SMARCC1-203ENST00000454240 GSDMCQ9BYG8 508 aa27.66■■■□□ 2.02
SMARCC1-203ENST00000454240 SYBUQ9NX95 663 aa27.66■■■□□ 2.02
SMARCC1-203ENST00000454240 PRKAB1Q9Y478 270 aa27.66■■■□□ 2.02
SMARCC1-203ENST00000454240 PLEKHM1Q9Y4G2 1056 aa27.66■■■□□ 2.02
SMARCC1-203ENST00000454240 GOLGA4Q13439 2230 aaKnown RBP27.65■■■□□ 2.02
SMARCC1-203ENST00000454240 TRBV5-4A0A0C4DH59 114 aa27.65■■■□□ 2.02
SMARCC1-203ENST00000454240 GOLGA8MH3BSY2 632 aa27.65■■■□□ 2.02
SMARCC1-203ENST00000454240 MAGEA3P43357 314 aa27.65■■■□□ 2.02
SMARCC1-203ENST00000454240 SIM1P81133 766 aaPredicted RBP27.65■■■□□ 2.02
SMARCC1-203ENST00000454240 CKAP4Q07065 602 aaKnown RBP27.65■■■□□ 2.02
SMARCC1-203ENST00000454240 ILF3Q12906 894 aaKnown RBP eCLIP27.65■■■□□ 2.021e-7■■■■□ 24.7
SMARCC1-203ENST00000454240 IZUMO3Q5VZ72 239 aa27.65■■■□□ 2.02
SMARCC1-203ENST00000454240 HOOK3Q86VS8 718 aa27.65■■■□□ 2.02
SMARCC1-203ENST00000454240 HDAC10Q969S8 669 aa27.65■■■□□ 2.02
SMARCC1-203ENST00000454240 ULK4Q96C45 1275 aa27.65■■■□□ 2.02
SMARCC1-203ENST00000454240 FAM96AQ9H5X1 160 aa27.65■■■□□ 2.02
SMARCC1-203ENST00000454240 MRM3Q9HC36 420 aaKnown RBP27.65■■■□□ 2.02
SMARCC1-203ENST00000454240 TOR4AQ9NXH8 423 aa27.65■■■□□ 2.02
SMARCC1-203ENST00000454240 CRLS1Q9UJA2 301 aa27.65■■■□□ 2.02
SMARCC1-203ENST00000454240 LY6G6EA0A0G2JKS1 128 aa27.64■■■□□ 2.02
SMARCC1-203ENST00000454240 CCDC162PA2VCL2 907 aa27.64■■■□□ 2.02
SMARCC1-203ENST00000454240 CKMT2P17540 419 aa27.64■■■□□ 2.02
SMARCC1-203ENST00000454240 AK4P27144 223 aaPredicted RBP27.64■■■□□ 2.02
SMARCC1-203ENST00000454240 CACNG1Q06432 222 aa27.64■■■□□ 2.02
SMARCC1-203ENST00000454240 LRP8Q14114 963 aa27.64■■■□□ 2.02
SMARCC1-203ENST00000454240 WHAMMP3Q1A5X7 153 aa27.64■■■□□ 2.02
SMARCC1-203ENST00000454240 ZRANB3Q5FWF4 1079 aa27.64■■■□□ 2.02
SMARCC1-203ENST00000454240 MAATS1Q7Z4T9 603 aa27.64■■■□□ 2.02
SMARCC1-203ENST00000454240 NXPE1Q8N323 547 aa27.64■■■□□ 2.02
SMARCC1-203ENST00000454240 ZCCHC2Q9C0B9 1178 aaKnown RBP27.64■■■□□ 2.02
SMARCC1-203ENST00000454240 TREX1Q9NSU2 369 aa27.64■■■□□ 2.02
SMARCC1-203ENST00000454240 SOX13Q9UN79 622 aa27.64■■■□□ 2.02
SMARCC1-203ENST00000454240 U3KQA8 63 aa27.64■■■□□ 2.02
SMARCC1-203ENST00000454240 FAM187AA6NFU0 413 aa27.63■■■□□ 2.01
SMARCC1-203ENST00000454240 CDKN1CP49918 316 aaPredicted RBP27.63■■■□□ 2.01
SMARCC1-203ENST00000454240 TUBB2AQ13885 445 aa27.63■■■□□ 2.01
SMARCC1-203ENST00000454240 CHST15Q7LFX5 561 aaPredicted RBP27.63■■■□□ 2.01
SMARCC1-203ENST00000454240 ZNF547Q8IVP9 402 aa27.63■■■□□ 2.01
SMARCC1-203ENST00000454240 MPP5Q8N3R9 675 aa27.63■■■□□ 2.01
SMARCC1-203ENST00000454240 RASGEF1AQ8N9B8 481 aa27.63■■■□□ 2.01
SMARCC1-203ENST00000454240 FAM46DQ8NEK8 389 aa27.63■■■□□ 2.01
SMARCC1-203ENST00000454240 KIF18AQ8NI77 898 aa27.63■■■□□ 2.01
SMARCC1-203ENST00000454240 SGSM3Q96HU1 749 aa27.63■■■□□ 2.01
SMARCC1-203ENST00000454240 TTC25Q96NG3 672 aa27.63■■■□□ 2.01
SMARCC1-203ENST00000454240 TUBB2BQ9BVA1 445 aa27.63■■■□□ 2.01
SMARCC1-203ENST00000454240 OR51F1A6NGY5 319 aa27.62■■■□□ 2.01
SMARCC1-203ENST00000454240 SDR42E2A6NKP2 422 aa27.62■■■□□ 2.01
SMARCC1-203ENST00000454240 PRSS56P0CW18 603 aa27.62■■■□□ 2.01
SMARCC1-203ENST00000454240 CKMT1AP12532 417 aa27.62■■■□□ 2.01
SMARCC1-203ENST00000454240 KCNA4P22459 653 aa27.62■■■□□ 2.01
SMARCC1-203ENST00000454240 NMBRP28336 390 aa27.62■■■□□ 2.01
SMARCC1-203ENST00000454240 FOXN2P32314 431 aa27.62■■■□□ 2.01
SMARCC1-203ENST00000454240 DNAJC3Q13217 504 aa27.62■■■□□ 2.01
SMARCC1-203ENST00000454240 GTF2H3Q13889 308 aa27.62■■■□□ 2.01
SMARCC1-203ENST00000454240 OGFOD3Q6PK18 319 aa27.62■■■□□ 2.01
SMARCC1-203ENST00000454240 LRRTM4Q86VH4 590 aa27.62■■■□□ 2.01
SMARCC1-203ENST00000454240 PIANPQ8IYJ0 282 aa27.62■■■□□ 2.01
SMARCC1-203ENST00000454240 SPATS2LQ9NUQ6 558 aaKnown RBP27.62■■■□□ 2.01
SMARCC1-203ENST00000454240 NCKIPSDQ9NZQ3 722 aa27.62■■■□□ 2.01
SMARCC1-203ENST00000454240 TAAR2Q9P1P5 351 aa27.62■■■□□ 2.01
SMARCC1-203ENST00000454240 GPR34Q9UPC5 381 aa27.62■■■□□ 2.01
SMARCC1-203ENST00000454240 MRFAP1Q9Y605 127 aa27.62■■■□□ 2.01
SMARCC1-203ENST00000454240 EFCAB8A8MWE9 144 aa27.61■■■□□ 2.01
SMARCC1-203ENST00000454240 KMOO15229 486 aa27.61■■■□□ 2.01
SMARCC1-203ENST00000454240 RAD51CO43502 376 aa27.61■■■□□ 2.01
SMARCC1-203ENST00000454240 DKK1O94907 266 aa27.61■■■□□ 2.01
SMARCC1-203ENST00000454240 GOT2P00505 430 aaKnown RBP27.61■■■□□ 2.01
SMARCC1-203ENST00000454240 MSH3P20585 1137 aa27.61■■■□□ 2.01
SMARCC1-203ENST00000454240 ACP1P24666 158 aa27.61■■■□□ 2.01
SMARCC1-203ENST00000454240 ACRV1P26436 265 aa27.61■■■□□ 2.01
SMARCC1-203ENST00000454240 MRPS25P82663 173 aaKnown RBP27.61■■■□□ 2.01
SMARCC1-203ENST00000454240 MORF4L2Q15014 288 aa27.61■■■□□ 2.01
SMARCC1-203ENST00000454240 HIBCHQ6NVY1 386 aaPredicted RBP27.61■■■□□ 2.01
SMARCC1-203ENST00000454240 SLC30A9Q6PML9 568 aa27.61■■■□□ 2.01
SMARCC1-203ENST00000454240 AFTPHQ6ULP2 937 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms