RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 XPO4Q9C0E2 1151 aaKnown RBP14.09□□□□□ -0.15
LYSMD3-202ENST00000453259 MLXIPLQ9NP71 852 aa14.09□□□□□ -0.15
LYSMD3-202ENST00000453259 LHX9Q9NQ69 397 aa14.09□□□□□ -0.15
LYSMD3-202ENST00000453259 WASH6PQ9NQA3 447 aa14.09□□□□□ -0.15
LYSMD3-202ENST00000453259 ETNK2Q9NVF9 386 aa14.09□□□□□ -0.15
LYSMD3-202ENST00000453259 OGFRQ9NZT2 677 aa14.09□□□□□ -0.15
LYSMD3-202ENST00000453259 SEMA5BQ9P283 1151 aa14.09□□□□□ -0.15
LYSMD3-202ENST00000453259 LNPEPQ9UIQ6 1025 aa14.09□□□□□ -0.15
LYSMD3-202ENST00000453259 ICE1Q9Y2F5 2266 aa14.08□□□□□ -0.15
LYSMD3-202ENST00000453259 CDC14CA4D256 554 aa14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 CHUKO15111 745 aa14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 MATN3O15232 486 aa14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 VEGFDO43915 354 aa14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 KATNA1O75449 491 aa14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 SPAG6O75602 509 aa14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 RASSF9O75901 435 aa14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 CLDN7O95471 211 aa14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 FTLP02792 175 aaPredicted RBP14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 ZNF28P17035 718 aa14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 NELFEP18615 380 aaKnown RBP14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 CCNCP24863 283 aa14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 GFERP55789 205 aa14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 MYL5Q02045 173 aa14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 ITKQ08881 620 aa14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 GALNT2Q10471 571 aa14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 PTPRRQ15256 657 aa14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 ZNF569Q5MCW4 686 aa14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 AGAP9Q5VTM2 703 aa14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 KLHL35Q6PF15 583 aa14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 SYVN1Q86TM6 617 aa14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 KMT5CQ86Y97 462 aa14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 UBXN4Q92575 508 aa14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 ZNF653Q96CK0 615 aa14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 TGM7Q96PF1 710 aa14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 TSGA13Q96PP4 275 aa14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 WDR24Q96S15 920 aa14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 SLC29A3Q9BZD2 475 aa14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 PCDH9Q9HC56 1237 aa14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 TRIM39Q9HCM9 518 aa14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 G3BP2Q9UN86 482 aaKnown RBP14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 PRKAB1Q9Y478 270 aa14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 PCYT1BQ9Y5K3 369 aaPredicted RBP14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 RP1L1Q8IWN7 2480 aaPredicted RBP14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 UTP20O75691 2785 aaKnown RBP14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 ZNF106Q9H2Y7 1883 aaKnown RBP14.08□□□□□ -0.16
LYSMD3-202ENST00000453259 SPENQ96T58 3664 aaKnown RBP14.07□□□□□ -0.16
LYSMD3-202ENST00000453259 FADS2P1A8MWK0 482 aa14.07□□□□□ -0.16
LYSMD3-202ENST00000453259 TMCO5BA8MYB1 307 aa14.07□□□□□ -0.16
LYSMD3-202ENST00000453259 K7EM74 188 aa14.07□□□□□ -0.16
LYSMD3-202ENST00000453259 KMOO15229 486 aa14.07□□□□□ -0.16
LYSMD3-202ENST00000453259 KCNJ13O60928 360 aa14.07□□□□□ -0.16
LYSMD3-202ENST00000453259 SORBS2O94875 1100 aaKnown RBP14.07□□□□□ -0.16
LYSMD3-202ENST00000453259 PRLP01236 227 aa14.07□□□□□ -0.16
LYSMD3-202ENST00000453259 FURINP09958 794 aa14.07□□□□□ -0.16
LYSMD3-202ENST00000453259 RARAP10276 462 aa14.07□□□□□ -0.16
LYSMD3-202ENST00000453259 VCLP18206 1134 aa14.07□□□□□ -0.16
LYSMD3-202ENST00000453259 NR1D1P20393 614 aa14.07□□□□□ -0.16
LYSMD3-202ENST00000453259 IL1R2P27930 398 aa14.07□□□□□ -0.16
LYSMD3-202ENST00000453259 PRKCIP41743 596 aa14.07□□□□□ -0.16
LYSMD3-202ENST00000453259 IFI16Q16666 785 aaKnown RBP14.07□□□□□ -0.16
LYSMD3-202ENST00000453259 SMTNL2Q2TAL5 461 aa14.07□□□□□ -0.16
LYSMD3-202ENST00000453259 ABRAXAS1Q6UWZ7 409 aa14.07□□□□□ -0.16
LYSMD3-202ENST00000453259 FAM71BQ8TC56 605 aa14.07□□□□□ -0.16
LYSMD3-202ENST00000453259 HSPH1Q92598 858 aa14.07□□□□□ -0.16
LYSMD3-202ENST00000453259 MLPHQ9BV36 600 aaPredicted RBP14.07□□□□□ -0.16
LYSMD3-202ENST00000453259 TRIM7Q9C029 511 aa14.07□□□□□ -0.16
LYSMD3-202ENST00000453259 OSGEPL1Q9H4B0 414 aa14.07□□□□□ -0.16
LYSMD3-202ENST00000453259 ACTL8Q9H568 366 aa14.07□□□□□ -0.16
LYSMD3-202ENST00000453259 PCDH18Q9HCL0 1135 aa14.07□□□□□ -0.16
LYSMD3-202ENST00000453259 SLC40A1Q9NP59 571 aa14.07□□□□□ -0.16
LYSMD3-202ENST00000453259 KLC4Q9NSK0 619 aa14.07□□□□□ -0.16
LYSMD3-202ENST00000453259 ATXN10Q9UBB4 475 aa14.07□□□□□ -0.16
LYSMD3-202ENST00000453259 CHKBQ9Y259 395 aa14.07□□□□□ -0.16
LYSMD3-202ENST00000453259 MAP4K5Q9Y4K4 846 aa14.07□□□□□ -0.16
LYSMD3-202ENST00000453259 ANKRD66B4E2M5 251 aa14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 SLC25A14O95258 325 aaPredicted RBP14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 MX2P20592 715 aa14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 CDK11BP21127 795 aaKnown RBP14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 GNLYP22749 145 aa14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 PTPN4P29074 926 aa14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 UQCRFS1P47985 274 aa14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 RPS15P62841 145 aaKnown RBP14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 SH3BP2P78314 561 aa14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 PDE1BQ01064 536 aa14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 ACY1Q03154 408 aa14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 PAFAH1B3Q15102 231 aaKnown RBP14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 INSCQ1MX18 579 aa14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 CCDC122Q5T0U0 273 aa14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 CACHD1Q5VU97 1274 aa14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 RBM43Q6ZSC3 357 aaKnown RBP14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 LRRTM4Q86VH4 590 aa14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 CARFQ8N187 725 aa14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 TRAM1L1Q8N609 369 aa14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 LPCAT1Q8NF37 534 aa14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 OR8K5Q8NH50 307 aa14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 ARRDC2Q8TBH0 407 aa14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 CT55Q8WUE5 264 aa14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 SLC41A2Q96JW4 573 aa14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 SRPK1Q96SB4 655 aaKnown RBP14.06□□□□□ -0.16
LYSMD3-202ENST00000453259 CD180Q99467 661 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms