RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 PTGER3P43115 390 aa11.68□□□□□ -0.54
VTA1-203ENST00000452973 CREMQ03060 361 aa11.68□□□□□ -0.54
VTA1-203ENST00000452973 ANKS6Q68DC2 871 aa11.68□□□□□ -0.54
VTA1-203ENST00000452973 TLDC1Q6P9B6 456 aa11.68□□□□□ -0.54
VTA1-203ENST00000452973 PGM2L1Q6PCE3 622 aa11.68□□□□□ -0.54
VTA1-203ENST00000452973 PAOXQ6QHF9 649 aa11.68□□□□□ -0.54
VTA1-203ENST00000452973 C16orf89Q6UX73 402 aa11.68□□□□□ -0.54
VTA1-203ENST00000452973 BNC2Q6ZN30 1099 aaPredicted RBP11.68□□□□□ -0.54
VTA1-203ENST00000452973 FRA10AC1Q70Z53 315 aa11.68□□□□□ -0.54
VTA1-203ENST00000452973 OR2AP1Q8NGE2 309 aa11.68□□□□□ -0.54
VTA1-203ENST00000452973 POF1BQ8WVV4 589 aa11.68□□□□□ -0.54
VTA1-203ENST00000452973 CDK15Q96Q40 435 aa11.68□□□□□ -0.54
VTA1-203ENST00000452973 EMILIN2Q9BXX0 1053 aa11.68□□□□□ -0.54
VTA1-203ENST00000452973 MRPL1Q9BYD6 325 aaKnown RBP11.68□□□□□ -0.54
VTA1-203ENST00000452973 WBP1LQ9NX94 342 aa11.68□□□□□ -0.54
VTA1-203ENST00000452973 CRLS1Q9UJA2 301 aa11.68□□□□□ -0.54
VTA1-203ENST00000452973 ANGPTL2Q9UKU9 493 aa11.68□□□□□ -0.54
VTA1-203ENST00000452973 NPIPB15A6NHN6 443 aaPredicted RBP11.67□□□□□ -0.54
VTA1-203ENST00000452973 PER2O15055 1255 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 ZNF821O75541 412 aaPredicted RBP11.67□□□□□ -0.54
VTA1-203ENST00000452973 UGT2B4P06133 528 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 LINC00271P0C7V0 271 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 SERPINA4P29622 427 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 DPP6P42658 865 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 MTTPP55157 894 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 ATP6V0D1P61421 351 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 ASTLQ6HA08 431 aaPredicted RBP11.67□□□□□ -0.54
VTA1-203ENST00000452973 RBM23Q86U06 439 aaKnown RBP11.67□□□□□ -0.54
VTA1-203ENST00000452973 PELI3Q8N2H9 469 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 HBEGFQ99075 208 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 APOL5Q9BWW9 433 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 IL1RL2Q9HB29 575 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 PRKAG2Q9UGJ0 569 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 EIF2B4Q9UI10 523 aaKnown RBP11.67□□□□□ -0.54
VTA1-203ENST00000452973 PLXNA4Q9HCM2 1894 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 SYCE1LA8MT33 242 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 BAIAP3O94812 1187 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 TSPAN12O95859 305 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 BPIP17213 487 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 HK3P52790 923 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 NFKB2Q00653 900 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 GRB7Q14451 532 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 CHRNA6Q15825 494 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 SLC5A9Q2M3M2 681 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 POM121L1PQ3SYA9 428 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 FUT11Q495W5 492 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 RFLNAQ6ZTI6 216 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 Q6ZVU0 165 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 FAM217AQ8IXS0 508 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 HMGCLL1Q8TB92 370 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 SORCS1Q8WY21 1168 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 ACOX2Q99424 681 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 HGH1Q9BTY7 390 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 PRSS21Q9Y6M0 314 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.67□□□□□ -0.54
VTA1-203ENST00000452973 GIPC1O14908 333 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 MAP3K7O43318 606 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 SNUPNO95149 360 aaKnown RBP11.67□□□□□ -0.54
VTA1-203ENST00000452973 ESR1P03372 595 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 SYN1P17600 705 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 XRCC1P18887 633 aaPredicted RBP11.67□□□□□ -0.54
VTA1-203ENST00000452973 CCNG1P51959 295 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 UGT3A2Q3SY77 523 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 FBXO46Q6PJ61 603 aaPredicted RBP11.67□□□□□ -0.54
VTA1-203ENST00000452973 DPY19L3Q6ZPD9 716 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 KCNJ9Q92806 393 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 SLC39A3Q9BRY0 314 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 S100A14Q9HCY8 104 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 CD84Q9UIB8 345 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 ZNF510Q9Y2H8 683 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 LRRC42Q9Y546 428 aa11.67□□□□□ -0.54
VTA1-203ENST00000452973 GLYATL1P3A0A0U1RQE8 302 aa11.66□□□□□ -0.54
VTA1-203ENST00000452973 SLC25A14O95258 325 aaPredicted RBP11.66□□□□□ -0.54
VTA1-203ENST00000452973 RHOP08100 348 aa11.66□□□□□ -0.54
VTA1-203ENST00000452973 ALDOCP09972 364 aaKnown RBP11.66□□□□□ -0.54
VTA1-203ENST00000452973 ZNF7P17097 686 aaPredicted RBP11.66□□□□□ -0.54
VTA1-203ENST00000452973 IRS1P35568 1242 aa11.66□□□□□ -0.54
VTA1-203ENST00000452973 STX1BP61266 288 aa11.66□□□□□ -0.54
VTA1-203ENST00000452973 SNRPD1P62314 119 aaKnown RBP11.66□□□□□ -0.54
VTA1-203ENST00000452973 SATB1Q01826 763 aa11.66□□□□□ -0.54
VTA1-203ENST00000452973 GALNT1Q10472 559 aaPredicted RBP11.66□□□□□ -0.54
VTA1-203ENST00000452973 LCP2Q13094 533 aa11.66□□□□□ -0.54
VTA1-203ENST00000452973 NFATC2Q13469 925 aa11.66□□□□□ -0.54
VTA1-203ENST00000452973 CEACAM7Q14002 265 aa11.66□□□□□ -0.54
VTA1-203ENST00000452973 RPS6KA2Q15349 733 aa11.66□□□□□ -0.54
VTA1-203ENST00000452973 HABP4Q5JVS0 413 aaKnown RBP11.66□□□□□ -0.54
VTA1-203ENST00000452973 LARP4Q71RC2 724 aaKnown RBP eCLIP11.66□□□□□ -0.54
VTA1-203ENST00000452973 CPXM2Q8N436 756 aa11.66□□□□□ -0.54
VTA1-203ENST00000452973 MRPL43Q8N983 215 aaKnown RBP11.66□□□□□ -0.54
VTA1-203ENST00000452973 LKAAEAR1Q8TD35 194 aa11.66□□□□□ -0.54
VTA1-203ENST00000452973 SERPINI1Q99574 410 aa11.66□□□□□ -0.54
VTA1-203ENST00000452973 TUBB1Q9H4B7 451 aa11.66□□□□□ -0.54
VTA1-203ENST00000452973 WNT6Q9Y6F9 365 aa11.66□□□□□ -0.54
VTA1-203ENST00000452973 H7C0S8 307 aa11.66□□□□□ -0.54
VTA1-203ENST00000452973 KATNA1O75449 491 aa11.66□□□□□ -0.54
VTA1-203ENST00000452973 CHRM1P11229 460 aaPredicted RBP11.66□□□□□ -0.54
VTA1-203ENST00000452973 HGFP14210 728 aa11.66□□□□□ -0.54
VTA1-203ENST00000452973 EPCAMP16422 314 aa11.66□□□□□ -0.54
VTA1-203ENST00000452973 ITGALP20701 1170 aa11.66□□□□□ -0.54
VTA1-203ENST00000452973 CLCN7P51798 805 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms