RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 IRX3P78415 501 aaPredicted RBP4.44□□□□□ -1.7
LINC00393-202ENST00000452852 RHAGQ02094 409 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 SPP2Q13103 211 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 KCNB1Q14721 858 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 LARS2Q15031 903 aaKnown RBP4.44□□□□□ -1.7
LINC00393-202ENST00000452852 DAZAP2Q15038 168 aaPredicted RBP4.44□□□□□ -1.7
LINC00393-202ENST00000452852 RNPS1Q15287 305 aaKnown RBP4.44□□□□□ -1.7
LINC00393-202ENST00000452852 RPE65Q16518 533 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 ME3Q16798 604 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 ZSCAN23Q3MJ62 389 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 ERMARDQ5T6L9 678 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 TXNDC8Q6A555 127 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 SHQ1Q6PI26 577 aaKnown RBP4.44□□□□□ -1.7
LINC00393-202ENST00000452852 MFSD6Q6ZSS7 791 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 C1QL2Q7Z5L3 287 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 TFAP2DQ7Z6R9 452 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 SLFN11Q7Z7L1 901 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 KBTBD6Q86V97 674 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 DNAAF5Q86Y56 855 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 KLBQ86Z14 1044 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 RFX6Q8HWS3 928 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 TICAM1Q8IUC6 712 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 ERC1Q8IUD2 1116 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 CNGA4Q8IV77 575 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 DHX40Q8IX18 779 aaKnown RBP4.44□□□□□ -1.7
LINC00393-202ENST00000452852 POGLUT1Q8NBL1 392 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 APPL2Q8NEU8 664 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 U2AF1L4Q8WU68 220 aaKnown RBP4.44□□□□□ -1.7
LINC00393-202ENST00000452852 PGAP3Q96FM1 320 aaPredicted RBP4.44□□□□□ -1.7
LINC00393-202ENST00000452852 PGAM5Q96HS1 289 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 JAKMIP1Q96N16 626 aaKnown RBP4.44□□□□□ -1.7
LINC00393-202ENST00000452852 DEFB118Q96PH6 123 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 EFHD1Q9BUP0 239 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 GPR108Q9NPR9 543 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 DDX4Q9NQI0 724 aaKnown RBP4.44□□□□□ -1.7
LINC00393-202ENST00000452852 SLC35C2Q9NQQ7 365 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 ATP8A2Q9NTI2 1148 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 GIMAP4Q9NUV9 329 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 PLK2Q9NYY3 685 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 WDR35Q9P2L0 1181 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 SEL1LQ9UBV2 794 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 BTBD3Q9Y2F9 522 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 TRPV2Q9Y5S1 764 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 SIRT4Q9Y6E7 314 aaPredicted RBP4.44□□□□□ -1.7
LINC00393-202ENST00000452852 ALPK3Q96L96 1907 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 SZT2Q5T011 3432 aa4.44□□□□□ -1.7
LINC00393-202ENST00000452852 LAMA2P24043 3122 aaKnown RBP4.43□□□□□ -1.7
LINC00393-202ENST00000452852 COL6A3P12111 3177 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 OR2A25A4D2G3 310 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 CXorf65A6NEN9 183 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 URADA6NGE7 173 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 C19orf81C9J6K1 198 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 DIAPH2O60879 1101 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 PSMD10O75832 226 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 IDH1O75874 414 aaKnown RBP4.43□□□□□ -1.7
LINC00393-202ENST00000452852 IPO7O95373 1038 aaKnown RBP4.43□□□□□ -1.7
LINC00393-202ENST00000452852 GGPS1O95749 300 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 SLC2A4P14672 509 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 TBXAS1P24557 533 aaPredicted RBP4.43□□□□□ -1.7
LINC00393-202ENST00000452852 CAPZA2P47755 286 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 LMAN1P49257 510 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 CYP2J2P51589 502 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 RAD23AP54725 363 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 GALCP54803 685 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 KLF9Q13886 244 aaPredicted RBP4.43□□□□□ -1.7
LINC00393-202ENST00000452852 FGFBP1Q14512 234 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 COG2Q14746 738 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 ASTE1Q2TB18 679 aaPredicted RBP4.43□□□□□ -1.7
LINC00393-202ENST00000452852 GLE1Q53GS7 698 aaKnown RBP4.43□□□□□ -1.7
LINC00393-202ENST00000452852 MORN5Q5VZ52 161 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 ZNF425Q6IV72 752 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 ZNF813Q6ZN06 617 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 GSTA5Q7RTV2 222 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 FOXP4Q8IVH2 680 aaPredicted RBP4.43□□□□□ -1.7
LINC00393-202ENST00000452852 KIAA2013Q8IYS2 634 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 SYT2Q8N9I0 419 aaPredicted RBP4.43□□□□□ -1.7
LINC00393-202ENST00000452852 POMGNT2Q8NAT1 580 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 TDRD5Q8NAT2 981 aaKnown RBP4.43□□□□□ -1.7
LINC00393-202ENST00000452852 OR6J1Q8NGC5 347 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 NEK9Q8TD19 979 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 PRPF31Q8WWY3 499 aaKnown RBP4.43□□□□□ -1.7
LINC00393-202ENST00000452852 ELMOD3Q96FG2 381 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 NCAPGQ9BPX3 1015 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 H2AFJQ9BTM1 129 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 GATA5Q9BWX5 397 aaPredicted RBP4.43□□□□□ -1.7
LINC00393-202ENST00000452852 PRSS22Q9GZN4 317 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 NUAK2Q9H093 628 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 OPA3Q9H6K4 179 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.43□□□□□ -1.7
LINC00393-202ENST00000452852 GAR1Q9NY12 217 aaKnown RBP4.43□□□□□ -1.7
LINC00393-202ENST00000452852 DLGAP2Q9P1A6 1054 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 ABI3Q9P2A4 366 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.43□□□□□ -1.7
LINC00393-202ENST00000452852 CLDN16Q9Y5I7 305 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 FLT1P17948 1338 aa4.43□□□□□ -1.7
LINC00393-202ENST00000452852 BAZ2AQ9UIF9 1905 aaKnown RBP4.42□□□□□ -1.7
LINC00393-202ENST00000452852 EYSQ5T1H1 3165 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 CYP2D7A0A087X1C5 515 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 A0A1W2PRG0 241 aa4.42□□□□□ -1.7
LINC00393-202ENST00000452852 GLOD5A6NK44 160 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms