RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 MAGIXQ9H6Y5 334 aa3.92□□□□□ -1.78
VPS8-211ENST00000452140 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.92□□□□□ -1.78
VPS8-211ENST00000452140 UBA2Q9UBT2 640 aaPredicted RBP3.92□□□□□ -1.78
VPS8-211ENST00000452140 SIX4Q9UIU6 781 aa3.92□□□□□ -1.78
VPS8-211ENST00000452140 TSPYL4Q9UJ04 414 aa3.92□□□□□ -1.78
VPS8-211ENST00000452140 DBNLQ9UJU6 430 aaKnown RBP3.92□□□□□ -1.78
VPS8-211ENST00000452140 EXO1Q9UQ84 846 aaKnown RBP3.92□□□□□ -1.78
VPS8-211ENST00000452140 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.92□□□□□ -1.78
VPS8-211ENST00000452140 PDS5AQ29RF7 1337 aaKnown RBP3.92□□□□□ -1.78
VPS8-211ENST00000452140 IGLV5-37A0A075B6J1 123 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 GLOD5A6NK44 160 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 TMEM189-UBE2V1I3L0A0 370 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 KCNN4O15554 427 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 ZNF217O75362 1048 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 AVILO75366 819 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 GAGE7O76087 117 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 GAGE12FP0CL80 117 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 GAGE12GP0CL81 117 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 GAGE12IP0CL82 117 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 FCGR1AP12314 374 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 MYOD1P15172 320 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 IL11P20809 199 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 S1PR1P21453 382 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 UGT1A1P22309 533 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 HRH2P25021 359 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 NMBRP28336 390 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 ISL1P61371 349 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 PDE1BQ01064 536 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 EGR4Q05215 589 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 LTBQ06643 244 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 CXCL9Q07325 125 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 SLC20A2Q08357 652 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 DLG1Q12959 904 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 GAGE1Q13065 139 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 GAGE4Q13068 117 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 UBE2V1Q13404 147 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 GRAPQ13588 217 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 SF3B4Q15427 424 aaKnown RBP eCLIP3.91□□□□□ -1.78
VPS8-211ENST00000452140 MEP1AQ16819 746 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 TMEM266Q2M3C6 531 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 FAM98BQ52LJ0 330 aaKnown RBP3.91□□□□□ -1.78
VPS8-211ENST00000452140 GARNL3Q5VVW2 1013 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 SLC30A6Q6NXT4 461 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 CREB3L2Q70SY1 520 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 CEP97Q8IW35 865 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 IQCF1Q8N6M8 205 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 EMC1Q8N766 993 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 ZBTB8BQ8NAP8 495 aaPredicted RBP3.91□□□□□ -1.78
VPS8-211ENST00000452140 KCTD6Q8NC69 237 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 SLC20A1Q8WUM9 679 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 TMEM19Q96HH6 336 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 CCDC34Q96HJ3 373 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 CDRT15Q96T59 188 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 GFI1Q99684 422 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 ZPBPQ9BS86 351 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 TMEM204Q9BSN7 226 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 CSTL1Q9H114 145 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 OSGEPL1Q9H4B0 414 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 LRRC4Q9HBW1 653 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 MCM9Q9NXL9 1143 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 ZNF224Q9NZL3 707 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 WNT16Q9UBV4 365 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 DNAJB4Q9UDY4 337 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 RPS6KL1Q9Y6S9 549 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 PTPRCP08575 1304 aa3.91□□□□□ -1.78
VPS8-211ENST00000452140 LOC102723996A0A087X1L8 192 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 A0A0G2JPF8 293 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 hCG_1809904A0A1W2PP81 198 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 A0A1W2PPE2 198 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 A0A1W2PR64 198 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 TMEM8BA6NDV4 472 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 GOLGA6L9A6NEM1 432 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 A6NL46 340 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 LACTBL1A8MY62 500 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 HNRNPCL3B7ZW38 293 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 TMEM178BH3BS89 294 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 J3QR06 171 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 ZBTB43O43298 467 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 SMAD6O43541 496 aaKnown RBP3.9□□□□□ -1.79
VPS8-211ENST00000452140 PLOD3O60568 738 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 PAPSS2O95340 614 aaPredicted RBP3.9□□□□□ -1.79
VPS8-211ENST00000452140 ZBTB11O95625 1053 aaPredicted RBP3.9□□□□□ -1.79
VPS8-211ENST00000452140 PMS2P2O95744 297 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 GH2P01242 217 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 HNRNPCL4P0DMR1 293 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 PRLRP16471 622 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 ITGA2P17301 1181 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 TNFRSF8P28908 595 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 FASLGP48023 281 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 PEX5P50542 639 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 KRTAP10-11P60412 298 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 TUBA1BP68363 451 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 CALD1Q05682 793 aaKnown RBP3.9□□□□□ -1.79
VPS8-211ENST00000452140 TRAF2Q12933 501 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 TNFAIP1Q13829 316 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 KRT33BQ14525 404 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 RASA2Q15283 850 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 SYT16Q17RD7 645 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 DENND5BQ6ZUT9 1274 aa3.9□□□□□ -1.79
VPS8-211ENST00000452140 PRPF39Q86UA1 669 aaKnown RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms