RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 IFI44Q8TCB0 444 aa14.43□□□□□ -0.1
USP39-206ENST00000448971 SNRNP27Q8WVK2 155 aaKnown RBP14.43□□□□□ -0.1
USP39-206ENST00000448971 COX14Q96I36 57 aa14.43□□□□□ -0.1
USP39-206ENST00000448971 BOCQ9BWV1 1114 aa14.43□□□□□ -0.1
USP39-206ENST00000448971 DPEP2Q9H4A9 486 aa14.43□□□□□ -0.1
USP39-206ENST00000448971 ARFGAP3Q9NP61 516 aa14.43□□□□□ -0.1
USP39-206ENST00000448971 ASCL3Q9NQ33 180 aa14.43□□□□□ -0.1
USP39-206ENST00000448971 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.43□□□□□ -0.14e-10■■■□□ 17.5
USP39-206ENST00000448971 VPS18Q9P253 973 aa14.43□□□□□ -0.1
USP39-206ENST00000448971 ZKSCAN5Q9Y2L8 839 aa14.43□□□□□ -0.1
USP39-206ENST00000448971 ARL5AQ9Y689 179 aa14.43□□□□□ -0.1
USP39-206ENST00000448971 OAS3Q9Y6K5 1087 aaKnown RBP14.43□□□□□ -0.1
USP39-206ENST00000448971 SCN8AQ9UQD0 1980 aa14.43□□□□□ -0.1
USP39-206ENST00000448971 AHCTF1Q8WYP5 2266 aa14.43□□□□□ -0.1
USP39-206ENST00000448971 HECTD1Q9ULT8 2610 aa14.43□□□□□ -0.1
USP39-206ENST00000448971 GLYATL1P3A0A0U1RQE8 302 aa14.42□□□□□ -0.1
USP39-206ENST00000448971 A0A1W2PNU3 283 aaPredicted RBP14.42□□□□□ -0.1
USP39-206ENST00000448971 C2orf81A6NN90 581 aa14.42□□□□□ -0.1
USP39-206ENST00000448971 USP27XA6NNY8 438 aa14.42□□□□□ -0.1
USP39-206ENST00000448971 J3QKU1 62 aa14.42□□□□□ -0.1
USP39-206ENST00000448971 SLC25A14O95258 325 aaPredicted RBP14.42□□□□□ -0.1
USP39-206ENST00000448971 CRTAMO95727 393 aa14.42□□□□□ -0.1
USP39-206ENST00000448971 AP2A1O95782 977 aa14.42□□□□□ -0.1
USP39-206ENST00000448971 ACTR1BP42025 376 aa14.42□□□□□ -0.1
USP39-206ENST00000448971 ACTR1AP61163 376 aa14.42□□□□□ -0.1
USP39-206ENST00000448971 GABREP78334 506 aa14.42□□□□□ -0.1
USP39-206ENST00000448971 RHDQ02161 417 aa14.42□□□□□ -0.1
USP39-206ENST00000448971 SEPT6Q14141 434 aa14.42□□□□□ -0.1
USP39-206ENST00000448971 TAF1AQ15573 450 aaPredicted RBP14.42□□□□□ -0.1
USP39-206ENST00000448971 CCNG2Q16589 344 aa14.42□□□□□ -0.1
USP39-206ENST00000448971 ARHGAP40Q5TG30 622 aa14.42□□□□□ -0.1
USP39-206ENST00000448971 GUSBP11Q6P575 273 aa14.42□□□□□ -0.1
USP39-206ENST00000448971 SLC30A9Q6PML9 568 aa14.42□□□□□ -0.1
USP39-206ENST00000448971 EFL1Q7Z2Z2 1120 aaKnown RBP14.42□□□□□ -0.1
USP39-206ENST00000448971 FAM46DQ8NEK8 389 aa14.42□□□□□ -0.1
USP39-206ENST00000448971 NAT6Q93015 286 aa14.42□□□□□ -0.1
USP39-206ENST00000448971 GLYATL1Q969I3 302 aa14.42□□□□□ -0.1
USP39-206ENST00000448971 DEPDC7Q96QD5 511 aa14.42□□□□□ -0.1
USP39-206ENST00000448971 SEMA4CQ9C0C4 833 aa14.42□□□□□ -0.1
USP39-206ENST00000448971 SYNDIG1Q9H7V2 258 aa14.42□□□□□ -0.1
USP39-206ENST00000448971 POLR1BQ9H9Y6 1135 aa14.42□□□□□ -0.1
USP39-206ENST00000448971 TRNAU1APQ9NX07 287 aaKnown RBP14.42□□□□□ -0.1
USP39-206ENST00000448971 IL17CQ9P0M4 197 aa14.42□□□□□ -0.1
USP39-206ENST00000448971 PAK5Q9P286 719 aa14.42□□□□□ -0.1
USP39-206ENST00000448971 FEZ2Q9UHY8 353 aaPredicted RBP14.42□□□□□ -0.1
USP39-206ENST00000448971 PSMD3O43242 534 aa14.41□□□□□ -0.1
USP39-206ENST00000448971 PPFIA2O75334 1257 aa14.41□□□□□ -0.1
USP39-206ENST00000448971 CSO75390 466 aaKnown RBP14.41□□□□□ -0.1
USP39-206ENST00000448971 LPOP22079 712 aaPredicted RBP14.41□□□□□ -0.1
USP39-206ENST00000448971 AK4P27144 223 aaPredicted RBP14.41□□□□□ -0.1
USP39-206ENST00000448971 FDFT1P37268 417 aa14.41□□□□□ -0.1
USP39-206ENST00000448971 ADCY8P40145 1251 aa14.41□□□□□ -0.1
USP39-206ENST00000448971 UCNP55089 124 aa14.41□□□□□ -0.1
USP39-206ENST00000448971 TMPRSS3P57727 454 aa14.41□□□□□ -0.1
USP39-206ENST00000448971 CTBSQ01459 385 aa14.41□□□□□ -0.1
USP39-206ENST00000448971 GTF2H3Q13889 308 aa14.41□□□□□ -0.1
USP39-206ENST00000448971 TAF1BQ53T94 588 aaPredicted RBP14.41□□□□□ -0.1
USP39-206ENST00000448971 KCTD11Q693B1 232 aa14.41□□□□□ -0.1
USP39-206ENST00000448971 PPP1R21Q6ZMI0 780 aa14.41□□□□□ -0.1
USP39-206ENST00000448971 PRUNE1Q86TP1 453 aa14.41□□□□□ -0.1
USP39-206ENST00000448971 MAPK15Q8TD08 544 aa14.41□□□□□ -0.1
USP39-206ENST00000448971 TTC9Q92623 222 aa14.41□□□□□ -0.1
USP39-206ENST00000448971 PBKQ96KB5 322 aa14.41□□□□□ -0.1
USP39-206ENST00000448971 ABCG4Q9H172 646 aa14.41□□□□□ -0.1
USP39-206ENST00000448971 OR2AG1Q9H205 316 aa14.41□□□□□ -0.1
USP39-206ENST00000448971 RAB6BQ9NRW1 208 aa14.41□□□□□ -0.1
USP39-206ENST00000448971 PIH1D1Q9NWS0 290 aaKnown RBP14.41□□□□□ -0.1
USP39-206ENST00000448971 ZNHIT2Q9UHR6 403 aa14.41□□□□□ -0.1
USP39-206ENST00000448971 CNOT6Q9ULM6 557 aaKnown RBP14.41□□□□□ -0.1
USP39-206ENST00000448971 PYCARDQ9ULZ3 195 aa14.41□□□□□ -0.1
USP39-206ENST00000448971 PADI4Q9UM07 663 aa14.41□□□□□ -0.1
USP39-206ENST00000448971 PRKAB1Q9Y478 270 aa14.41□□□□□ -0.1
USP39-206ENST00000448971 COL27A1Q8IZC6 1860 aaPredicted RBP14.41□□□□□ -0.1
USP39-206ENST00000448971 BOD1L1Q8NFC6 3051 aa14.41□□□□□ -0.1
USP39-206ENST00000448971 EME2A4GXA9 379 aaPredicted RBP14.4□□□□□ -0.1
USP39-206ENST00000448971 ERI2A8K979 691 aaKnown RBP14.4□□□□□ -0.1
USP39-206ENST00000448971 CYSRT1A8MQ03 144 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 PGRMC1O00264 195 aaKnown RBP14.4□□□□□ -0.1
USP39-206ENST00000448971 GPR39O43194 453 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 MTX2O75431 263 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 PRAMEF1O95521 474 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 GAS8O95995 478 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 FUCA1P04066 466 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 ACP5P13686 325 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 ETS1P14921 441 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 BASP1P80723 227 aaKnown RBP14.4□□□□□ -0.1
USP39-206ENST00000448971 PDE1BQ01064 536 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 BIRC2Q13490 618 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 PEX6Q13608 980 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 ITGA9Q13797 1035 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 LRP8Q14114 963 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 PTPRCAPQ14761 206 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 ISXQ2M1V0 245 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 PLA2G4EQ3MJ16 856 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 ATP13A5Q4VNC0 1218 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 PYCR3Q53H96 274 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 ZNF648Q5T619 568 aaPredicted RBP14.4□□□□□ -0.1
USP39-206ENST00000448971 BROXQ5VW32 411 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 DRICH1Q6PGQ1 229 aaPredicted RBP14.4□□□□□ -0.1
USP39-206ENST00000448971 IGF2-ASQ6U949 168 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms