RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 METTL18O95568 372 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 ECEL1O95672 775 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 KRT14P02533 472 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 CR2P20023 1033 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 PSMB4P28070 264 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 VIPR1P32241 457 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 RPL22P35268 128 aaKnown RBP13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 GPR3P46089 330 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 DR1Q01658 176 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 ITKQ08881 620 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 TGIF1Q15583 401 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 TEX44Q53QW1 395 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 MANEAQ5SRI9 462 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 PHF19Q5T6S3 580 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 SLITRK4Q8IW52 837 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 NDUFAF2Q8N183 169 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 CEP112Q8N8E3 955 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 CCDC89Q8N998 374 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 ZDHHC1Q8WTX9 485 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 USP7Q93009 1102 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 FATE1Q969F0 183 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 RTP4Q96DX8 246 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 SCRN2Q96FV2 425 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 TEKT5Q96M29 485 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 SEMA3CQ99985 751 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 MGME1Q9BQP7 344 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 ARHGAP9Q9BRR9 750 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 CARS2Q9HA77 564 aaKnown RBP13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 SPATS2LQ9NUQ6 558 aaKnown RBP13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 PCYOX1Q9UHG3 505 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 PCDHGC4Q9Y5F7 938 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 C5orf60A6NFR6 353 aa13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 HGSO14964 777 aaPredicted RBP13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 MTSS1O43312 755 aa13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 FGF1P05230 155 aa13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 CEACAM5P06731 702 aa13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 ITIH1P19827 911 aa13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 ALDH4A1P30038 563 aa13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 MAPK10P53779 464 aa13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 SLC7A5Q01650 507 aa13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 KCNC4Q03721 635 aa13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 BIRC2Q13490 618 aa13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 TRA2AQ13595 282 aaKnown RBP eCLIP13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 NR1D2Q14995 579 aa13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 CNGA3Q16281 694 aa13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 MAP9Q49MG5 647 aa13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 ZNF438Q7Z4V0 828 aa13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 HEATR4Q86WZ0 1026 aa13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 DTX1Q86Y01 620 aa13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 MNS1Q8NEH6 495 aa13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 SPATA22Q8NHS9 363 aa13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 ARRDC2Q8TBH0 407 aa13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 PDCD6IPQ8WUM4 868 aaKnown RBP13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 DTD2Q96FN9 168 aa13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 DPYSL5Q9BPU6 564 aa13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 LRRC1Q9BTT6 524 aa13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 FRMD8Q9BZ67 464 aaPredicted RBP13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 FAM117AQ9C073 453 aa13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 SEMA6CQ9H3T2 930 aa13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 GLOD4Q9HC38 313 aa13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 UBP1Q9NZI7 540 aa13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 TAAR2Q9P1P5 351 aa13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 RSPH14Q9UHP6 348 aa13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 PPIL1Q9Y3C6 166 aa13.65□□□□□ -0.22
PDLIM2-213ENST00000448520 PRAMEF33A0A0G2JMD5 474 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 SLC28A2O43868 658 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 PRAMEF10O60809 474 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 STK10O94804 968 aaKnown RBP13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 CPP00450 1065 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 IVLP07476 585 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 MMP2P08253 660 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 STIP1P31948 543 aaKnown RBP13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 OR1D5P58170 312 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 CDK3Q00526 305 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 DPTQ07507 201 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 SQSTM1Q13501 440 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 OLIG2Q13516 323 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 PPP1R7Q15435 360 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 LINC00303Q3SY05 128 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 ARMC12Q5T9G4 340 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 ARHGEF18Q6ZSZ5 1173 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 USP45Q70EL2 814 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 NLRP8Q86W28 1048 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 NRROSQ86YC3 692 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 SFTPA2Q8IWL1 248 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 PELI3Q8N2H9 469 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 MMGT1Q8N4V1 131 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 EXD3Q8N9H8 876 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 SLCO2A1Q92959 643 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 OXNAD1Q96HP4 312 aaPredicted RBP13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 MLPHQ9BV36 600 aaPredicted RBP13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 TRIM31Q9BZY9 425 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 GBA3Q9H227 469 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 CLMPQ9H6B4 373 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 NOD2Q9HC29 1040 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 PCDH9Q9HC56 1237 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 SUFUQ9UMX1 484 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 SLC17A4Q9Y2C5 497 aa13.64□□□□□ -0.23
PDLIM2-213ENST00000448520 HEMK1Q9Y5R4 338 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms