RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 SGCDQ92629 289 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 LIN7BQ9HAP6 207 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 NSMCE4AQ9NXX6 385 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 USE1Q9NZ43 259 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 A0A0A0MRY4 1105 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 A0A0G2JMP0 313 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 ENPP3O14638 875 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 OGTO15294 1046 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 ITGA2P17301 1181 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 HDCP19113 662 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 ARHGAP1Q07960 439 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 GPR50Q13585 617 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 IMPG1Q17R60 797 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 GALNT11Q8NCW6 608 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 FBLIM1Q8WUP2 373 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 ZHX1-C8orf76Q96EF9 292 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 SPATA13Q96N96 652 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 TRAF4Q9BUZ4 470 aaPredicted RBP19.05■□□□□ 0.64
HMGA1-205ENST00000447654 CCDC32Q9BV29 185 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 ACAT2Q9BWD1 397 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 KCNN2Q9H2S1 579 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 FZD8Q9H461 694 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 MROH8Q9H579 483 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 ZFP14Q9HCL3 533 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 EGFL7Q9UHF1 273 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 E2F8A0AVK6 867 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 HACD1B0YJ81 288 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 LOC110117498-PIK3R3F6TDL0 507 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 INO80B-WBP1J3KQ70 363 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 DLX3O60479 287 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 PRKD3O94806 890 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 IL7P13232 177 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 GPD1P21695 349 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 PITRM1Q5JRX3 1037 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 TAPT1Q6NXT6 567 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 DENND1BQ6P3S1 775 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 TRAF7Q6Q0C0 670 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 LYPD8Q6UX82 237 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 PLCZ1Q86YW0 608 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 LILRB1Q8NHL6 650 aaPredicted RBP19.05■□□□□ 0.64
HMGA1-205ENST00000447654 PCDH19Q8TAB3 1148 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 BLOC1S5Q8TDH9 187 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 REXO5Q96IC2 774 aaKnown RBP19.05■□□□□ 0.64
HMGA1-205ENST00000447654 CITED4Q96RK1 184 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 NARFLQ9H6Q4 476 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 CISHQ9NSE2 258 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 CMTM6Q9NX76 183 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 MAP10Q9P2G4 905 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 VANGL2Q9ULK5 521 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 VPS4AQ9UN37 437 aa19.05■□□□□ 0.64
HMGA1-205ENST00000447654 ANK1P16157 1881 aa19.04■□□□□ 0.64
HMGA1-205ENST00000447654 TRIM77I1YAP6 450 aa19.04■□□□□ 0.64
HMGA1-205ENST00000447654 SLITRK5O94991 958 aa19.04■□□□□ 0.64
HMGA1-205ENST00000447654 C22orf31O95567 290 aa19.04■□□□□ 0.64
HMGA1-205ENST00000447654 ITGBL1O95965 494 aaPredicted RBP19.04■□□□□ 0.64
HMGA1-205ENST00000447654 SESN2P58004 480 aaPredicted RBP19.04■□□□□ 0.64
HMGA1-205ENST00000447654 B2MP61769 119 aa19.04■□□□□ 0.64
HMGA1-205ENST00000447654 MBTD1Q05BQ5 628 aa19.04■□□□□ 0.64
HMGA1-205ENST00000447654 CD47Q08722 323 aa19.04■□□□□ 0.64
HMGA1-205ENST00000447654 MEP1AQ16819 746 aa19.04■□□□□ 0.64
HMGA1-205ENST00000447654 ZIK1Q3SY52 487 aaPredicted RBP19.04■□□□□ 0.64
HMGA1-205ENST00000447654 COLEC12Q5KU26 742 aa19.04■□□□□ 0.64
HMGA1-205ENST00000447654 HEATR6Q6AI08 1181 aaKnown RBP19.04■□□□□ 0.64
HMGA1-205ENST00000447654 RIMKLAQ8IXN7 391 aa19.04■□□□□ 0.64
HMGA1-205ENST00000447654 TSPEARQ8WU66 669 aa19.04■□□□□ 0.64
HMGA1-205ENST00000447654 CEP19Q96LK0 163 aa19.04■□□□□ 0.64
HMGA1-205ENST00000447654 NIF3L1Q9GZT8 377 aa19.04■□□□□ 0.64
HMGA1-205ENST00000447654 TOR3AQ9H497 397 aa19.04■□□□□ 0.64
HMGA1-205ENST00000447654 RAPGEFL1Q9UHV5 662 aa19.04■□□□□ 0.64
HMGA1-205ENST00000447654 POLHQ9Y253 713 aa19.04■□□□□ 0.64
HMGA1-205ENST00000447654 PCDHA9Q9Y5H5 950 aa19.04■□□□□ 0.64
HMGA1-205ENST00000447654 TYW5A2RUC4 315 aaKnown RBP19.03■□□□□ 0.64
HMGA1-205ENST00000447654 ARHGEF9O43307 516 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 SNX2O60749 519 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 NOS1APO75052 506 aaPredicted RBP19.03■□□□□ 0.64
HMGA1-205ENST00000447654 SEMA3DO95025 777 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 SLC6A2P23975 617 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 ERP29P30040 261 aaKnown RBP19.03■□□□□ 0.64
HMGA1-205ENST00000447654 EEFSECP57772 596 aaKnown RBP19.03■□□□□ 0.64
HMGA1-205ENST00000447654 TFAMQ00059 246 aaKnown RBP19.03■□□□□ 0.64
HMGA1-205ENST00000447654 ATF7IP2Q5U623 682 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 RETREG3Q86VR2 466 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 ZBTB8OSQ8IWT0 167 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 CLEC4FQ8N1N0 589 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 FAM83FQ8NEG4 500 aaPredicted RBP19.03■□□□□ 0.64
HMGA1-205ENST00000447654 LHFPL5Q8TAF8 219 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 TFAP2BQ92481 460 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 TMCO6Q96DC7 493 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 SCYL1Q96KG9 808 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 GPR22Q99680 433 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 KIFC1Q9BW19 673 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 XYLT2Q9H1B5 865 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 ZNF408Q9H9D4 720 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 GMPR2Q9P2T1 348 aaKnown RBP19.03■□□□□ 0.64
HMGA1-205ENST00000447654 HMGXB4Q9UGU5 601 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 ACKR2O00590 384 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 DFNA5O60443 496 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 INSRRP14616 1297 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 CES1P23141 567 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 KPNA2P52292 529 aaKnown RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms