RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 PDZD4Q76G19 769 aaPredicted RBP13.01□□□□□ -0.33
DDX56-206ENST00000446987 SLC38A6Q8IZM9 456 aa13.01□□□□□ -0.33
DDX56-206ENST00000446987 SPARTQ8N0X7 666 aa13.01□□□□□ -0.33
DDX56-206ENST00000446987 MFSD4AQ8N468 514 aa13.01□□□□□ -0.33
DDX56-206ENST00000446987 SCAMP5Q8TAC9 235 aa13.01□□□□□ -0.33
DDX56-206ENST00000446987 LRTOMTQ8WZ04 291 aa13.01□□□□□ -0.33
DDX56-206ENST00000446987 ATP6V1E2Q96A05 226 aa13.01□□□□□ -0.33
DDX56-206ENST00000446987 ZSWIM3Q96MP5 696 aa13.01□□□□□ -0.33
DDX56-206ENST00000446987 CDK5RAP1Q96SZ6 601 aaKnown RBP13.01□□□□□ -0.33
DDX56-206ENST00000446987 B3GNT4Q9C0J1 378 aa13.01□□□□□ -0.33
DDX56-206ENST00000446987 IRF2BPLQ9H1B7 796 aa13.01□□□□□ -0.33
DDX56-206ENST00000446987 SMOXQ9NWM0 555 aa13.01□□□□□ -0.33
DDX56-206ENST00000446987 UBA2Q9UBT2 640 aaPredicted RBP13.01□□□□□ -0.33
DDX56-206ENST00000446987 DCDC2Q9UHG0 476 aa13.01□□□□□ -0.33
DDX56-206ENST00000446987 WBP11Q9Y2W2 641 aaKnown RBP13.01□□□□□ -0.33
DDX56-206ENST00000446987 ST14Q9Y5Y6 855 aa13.01□□□□□ -0.33
DDX56-206ENST00000446987 RAD54BQ9Y620 910 aa13.01□□□□□ -0.33
DDX56-206ENST00000446987 FAM92AA1XBS5 289 aa13□□□□□ -0.33
DDX56-206ENST00000446987 ZSCAN5BA6NJL1 495 aa13□□□□□ -0.33
DDX56-206ENST00000446987 SAC3D1A6NKF1 404 aa13□□□□□ -0.33
DDX56-206ENST00000446987 POLR1CO15160 346 aaPredicted RBP13□□□□□ -0.33
DDX56-206ENST00000446987 CHADO15335 359 aa13□□□□□ -0.33
DDX56-206ENST00000446987 MICAL2O94851 1124 aa13□□□□□ -0.33
DDX56-206ENST00000446987 KRT1P04264 644 aa13□□□□□ -0.33
DDX56-206ENST00000446987 GSNP06396 782 aa13□□□□□ -0.33
DDX56-206ENST00000446987 NAT2P11245 290 aa13□□□□□ -0.33
DDX56-206ENST00000446987 KRT10P13645 584 aa13□□□□□ -0.33
DDX56-206ENST00000446987 MATN1P21941 496 aa13□□□□□ -0.33
DDX56-206ENST00000446987 NR4A1P22736 598 aa13□□□□□ -0.33
DDX56-206ENST00000446987 FCARP24071 287 aa13□□□□□ -0.33
DDX56-206ENST00000446987 GABRR2P28476 465 aa13□□□□□ -0.33
DDX56-206ENST00000446987 CD40LGP29965 261 aa13□□□□□ -0.33
DDX56-206ENST00000446987 SSTR3P32745 418 aaPredicted RBP13□□□□□ -0.33
DDX56-206ENST00000446987 NSFP46459 744 aaKnown RBP13□□□□□ -0.33
DDX56-206ENST00000446987 PGFP49763 221 aa13□□□□□ -0.33
DDX56-206ENST00000446987 IFITM3Q01628 133 aa13□□□□□ -0.33
DDX56-206ENST00000446987 SLC12A1Q13621 1099 aa13□□□□□ -0.33
DDX56-206ENST00000446987 MTX3Q5HYI7 312 aa13□□□□□ -0.33
DDX56-206ENST00000446987 PERM1Q5SV97 790 aa13□□□□□ -0.33
DDX56-206ENST00000446987 MFSD7Q6UXD7 560 aa13□□□□□ -0.33
DDX56-206ENST00000446987 CHSY3Q70JA7 882 aa13□□□□□ -0.33
DDX56-206ENST00000446987 ERMP1Q7Z2K6 904 aa13□□□□□ -0.33
DDX56-206ENST00000446987 SNX32Q86XE0 403 aa13□□□□□ -0.33
DDX56-206ENST00000446987 CCDC28AQ8IWP9 274 aa13□□□□□ -0.33
DDX56-206ENST00000446987 TDRD5Q8NAT2 981 aaKnown RBP13□□□□□ -0.33
DDX56-206ENST00000446987 ST13P5Q8NFI4 369 aaPredicted RBP13□□□□□ -0.33
DDX56-206ENST00000446987 C9orf16Q9BUW7 83 aa13□□□□□ -0.33
DDX56-206ENST00000446987 COL25A1Q9BXS0 654 aaPredicted RBP13□□□□□ -0.33
DDX56-206ENST00000446987 DUSP16Q9BY84 665 aa13□□□□□ -0.33
DDX56-206ENST00000446987 SARDHQ9UL12 918 aa13□□□□□ -0.33
DDX56-206ENST00000446987 MRPS23Q9Y3D9 190 aaKnown RBP13□□□□□ -0.33
DDX56-206ENST00000446987 ARIH1Q9Y4X5 557 aaPredicted RBP13□□□□□ -0.33
DDX56-206ENST00000446987 COL4A3Q01955 1670 aa13□□□□□ -0.33
DDX56-206ENST00000446987 TEX51A0A1B0GUA7 166 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 DLGAP1O14490 977 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 SNPHO15079 494 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 SHOXO15266 292 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 MTSS1O43312 755 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 PLIN3O60664 434 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 AVILO75366 819 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 GPC4O75487 556 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 IFNB1P01574 187 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 KRT8P05787 483 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 CDH1P12830 882 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 LAMP2P13473 410 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 CD19P15391 556 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 NELFEP18615 380 aaKnown RBP12.99□□□□□ -0.33
DDX56-206ENST00000446987 RRM2P31350 389 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 CASP3P42574 277 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 CDKN2BP42772 138 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 SERPINB10P48595 397 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 PRKAA2P54646 552 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 GAD2Q05329 585 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 CDK10Q15131 360 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 PGS1Q32NB8 556 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 LCLAT1Q6UWP7 414 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 PHF13Q86YI8 300 aaPredicted RBP12.99□□□□□ -0.33
DDX56-206ENST00000446987 UNC5BQ8IZJ1 945 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 ZCCHC7Q8N3Z6 543 aaKnown RBP12.99□□□□□ -0.33
DDX56-206ENST00000446987 NATD1Q8N6N6 113 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 PPM1NQ8N819 430 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 ANKRD52Q8NB46 1076 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 LEMD2Q8NC56 503 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 C2orf49Q9BVC5 232 aaPredicted RBP12.99□□□□□ -0.33
DDX56-206ENST00000446987 PCDH12Q9NPG4 1184 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 PNPOQ9NVS9 261 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 MAGED2Q9UNF1 606 aaPredicted RBP12.99□□□□□ -0.33
DDX56-206ENST00000446987 SAGE2PA6NJ88 616 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 FAM25AB3EWG3 89 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 FAM25CB3EWG5 89 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 FAM25GB3EWG6 89 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 ANHXE9PGG2 379 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 PHGDHO43175 533 aaKnown RBP12.99□□□□□ -0.33
DDX56-206ENST00000446987 MAN1A2O60476 641 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 UGT2B11O75310 529 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 LYPLA1O75608 230 aaPredicted RBP12.99□□□□□ -0.33
DDX56-206ENST00000446987 ZMPSTE24O75844 475 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 IL32P24001 234 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 GSTM2P28161 218 aa12.99□□□□□ -0.33
DDX56-206ENST00000446987 GRK3P35626 688 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms