RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 TYSND1Q2T9J0 566 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 KHDC1Q4VXA5 237 aaKnown RBP17.23■□□□□ 0.35
SGCE-206ENST00000445866 ZNF789Q5FWF6 425 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 RNF187Q5TA31 235 aaPredicted RBP17.23■□□□□ 0.35
SGCE-206ENST00000445866 FBXO38Q6PIJ6 1188 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 KYAT3Q6YP21 454 aaKnown RBP17.23■□□□□ 0.35
SGCE-206ENST00000445866 SLC26A11Q86WA9 606 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 RBFAQ8N0V3 343 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 SCG3Q8WXD2 468 aaKnown RBP17.23■□□□□ 0.35
SGCE-206ENST00000445866 BOCQ9BWV1 1114 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 INTS10Q9NVR2 710 aaKnown RBP17.23■□□□□ 0.35
SGCE-206ENST00000445866 IKBKGQ9Y6K9 419 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 MYCLP1P12525 358 aaPredicted RBP17.22■□□□□ 0.35
SGCE-206ENST00000445866 ATP1B2P14415 290 aaPredicted RBP17.22■□□□□ 0.35
SGCE-206ENST00000445866 FMO4P31512 558 aa17.22■□□□□ 0.35
SGCE-206ENST00000445866 NSG1P42857 185 aa17.22■□□□□ 0.35
SGCE-206ENST00000445866 POLD2P49005 469 aa17.22■□□□□ 0.35
SGCE-206ENST00000445866 CSNK1EP49674 416 aaKnown RBP17.22■□□□□ 0.35
SGCE-206ENST00000445866 AFF3P51826 1226 aaKnown RBP17.22■□□□□ 0.35
SGCE-206ENST00000445866 IFFO1Q0D2I5 559 aa17.22■□□□□ 0.35
SGCE-206ENST00000445866 NAB1Q13506 487 aa17.22■□□□□ 0.35
SGCE-206ENST00000445866 ITIH4Q14624 930 aa17.22■□□□□ 0.35
SGCE-206ENST00000445866 CNSTQ6PJW8 725 aa17.22■□□□□ 0.35
SGCE-206ENST00000445866 ENPP7Q6UWV6 458 aa17.22■□□□□ 0.35
SGCE-206ENST00000445866 DET1Q7L5Y6 550 aa17.22■□□□□ 0.35
SGCE-206ENST00000445866 ADGRG6Q86SQ4 1221 aa17.22■□□□□ 0.35
SGCE-206ENST00000445866 CLDN19Q8N6F1 224 aa17.22■□□□□ 0.35
SGCE-206ENST00000445866 NAT14Q8WUY8 206 aa17.22■□□□□ 0.35
SGCE-206ENST00000445866 SKA1Q96BD8 255 aa17.22■□□□□ 0.35
SGCE-206ENST00000445866 SGF29Q96ES7 293 aa17.22■□□□□ 0.35
SGCE-206ENST00000445866 CPNE1Q99829 537 aa17.22■□□□□ 0.35
SGCE-206ENST00000445866 CLPBQ9H078 707 aa17.22■□□□□ 0.35
SGCE-206ENST00000445866 TMEM74BQ9NUR3 256 aa17.22■□□□□ 0.35
SGCE-206ENST00000445866 ATXN10Q9UBB4 475 aa17.22■□□□□ 0.35
SGCE-206ENST00000445866 MOSPD1Q9UJG1 213 aa17.22■□□□□ 0.35
SGCE-206ENST00000445866 PILRBQ9UKJ0 227 aa17.22■□□□□ 0.35
SGCE-206ENST00000445866 RAB23Q9ULC3 237 aa17.22■□□□□ 0.35
SGCE-206ENST00000445866 A0A1W2PR77 199 aa17.21■□□□□ 0.35
SGCE-206ENST00000445866 TMEM202A6NGA9 273 aa17.21■□□□□ 0.35
SGCE-206ENST00000445866 TLR4O00206 839 aa17.21■□□□□ 0.35
SGCE-206ENST00000445866 PRMT5O14744 637 aaPredicted RBP17.21■□□□□ 0.35
SGCE-206ENST00000445866 VEGFDO43915 354 aa17.21■□□□□ 0.35
SGCE-206ENST00000445866 FAM155BO75949 473 aa17.21■□□□□ 0.35
SGCE-206ENST00000445866 WNT1P04628 370 aa17.21■□□□□ 0.35
SGCE-206ENST00000445866 KELP23276 732 aa17.21■□□□□ 0.35
SGCE-206ENST00000445866 CD151P48509 253 aa17.21■□□□□ 0.35
SGCE-206ENST00000445866 B4GALNT1Q00973 533 aa17.21■□□□□ 0.35
SGCE-206ENST00000445866 OVGP1Q12889 678 aa17.21■□□□□ 0.35
SGCE-206ENST00000445866 NFATC4Q14934 902 aa17.21■□□□□ 0.35
SGCE-206ENST00000445866 GRTP1Q5TC63 336 aa17.21■□□□□ 0.35
SGCE-206ENST00000445866 MARK2Q7KZI7 788 aaKnown RBP17.21■□□□□ 0.35
SGCE-206ENST00000445866 IQCHQ86VS3 1027 aa17.21■□□□□ 0.35
SGCE-206ENST00000445866 DCP2Q8IU60 420 aaKnown RBP17.21■□□□□ 0.35
SGCE-206ENST00000445866 SYT12Q8IV01 421 aa17.21■□□□□ 0.35
SGCE-206ENST00000445866 OR2W6PQ8NHA6 318 aa17.21■□□□□ 0.35
SGCE-206ENST00000445866 CCDC97Q96F63 343 aaPredicted RBP17.21■□□□□ 0.35
SGCE-206ENST00000445866 ZCCHC2Q9C0B9 1178 aaKnown RBP17.21■□□□□ 0.35
SGCE-206ENST00000445866 PLAAQ9Y263 795 aa17.21■□□□□ 0.35
SGCE-206ENST00000445866 CUL9Q8IWT3 2517 aa17.21■□□□□ 0.35
SGCE-206ENST00000445866 IGLV3-16A0A075B6K0 115 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 PRR5-ARHGAP8B1AHC4 643 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 INHBAP08476 426 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 GP5P40197 560 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 ABCG1P45844 678 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 EIF3BP55884 814 aaKnown RBP17.2■□□□□ 0.34
SGCE-206ENST00000445866 C21orf59P57076 290 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 KIAA1024LP59773 190 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 TCF15Q12870 199 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 GTF2H3Q13889 308 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 PTK2BQ14289 1009 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 TEAD4Q15561 434 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 TPRG1LQ5T0D9 272 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 TMEM220Q6QAJ8 160 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 LAYNQ6UX15 382 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 RASGEF1AQ8N9B8 481 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 PRSS33Q8NF86 280 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 OR56A4Q8NGH8 313 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 SLC44A1Q8WWI5 657 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 LPGAT1Q92604 370 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 WDR92Q96MX6 357 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 ZNHIT2Q9UHR6 403 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 NUMA1Q14980 2115 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 ATXN2Q99700 1313 aaKnown RBP17.2■□□□□ 0.34
SGCE-206ENST00000445866 A0A1B0GTW7 788 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 MAGEC1O60732 1142 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 CEACAM5P06731 702 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 NUDT17P0C025 328 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 ZNF8P17098 575 aaPredicted RBP17.2■□□□□ 0.34
SGCE-206ENST00000445866 SPRP35270 261 aaPredicted RBP17.2■□□□□ 0.34
SGCE-206ENST00000445866 PTRHD1Q6GMV3 140 aaKnown RBP17.2■□□□□ 0.34
SGCE-206ENST00000445866 PACS1Q6VY07 963 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 GALNT7Q86SF2 657 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 IQCKQ8N0W5 287 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 ATOH1Q92858 354 aaPredicted RBP17.2■□□□□ 0.34
SGCE-206ENST00000445866 ATXN7L3BQ96GX2 97 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 PAFAH2Q99487 392 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 CCDC68Q9H2F9 335 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 SUSD2Q9UGT4 822 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 PRSS21Q9Y6M0 314 aa17.2■□□□□ 0.34
SGCE-206ENST00000445866 SPTY2D1-AS1A0A0U1RR47 76 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms