RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 GAPDHSO14556 408 aaPredicted RBP18.39■□□□□ 0.53
CCDC188-202ENST00000444532 CASC3O15234 703 aaKnown RBP18.39■□□□□ 0.53
CCDC188-202ENST00000444532 UGT1A9O60656 530 aa18.39■□□□□ 0.53
CCDC188-202ENST00000444532 AP2A1O95782 977 aa18.39■□□□□ 0.53
CCDC188-202ENST00000444532 UGT1A6P19224 532 aa18.39■□□□□ 0.53
CCDC188-202ENST00000444532 UGT1A1P22309 533 aa18.39■□□□□ 0.53
CCDC188-202ENST00000444532 UGT1A4P22310 534 aa18.39■□□□□ 0.53
CCDC188-202ENST00000444532 UGT1A3P35503 534 aa18.39■□□□□ 0.53
CCDC188-202ENST00000444532 UGT1A5P35504 534 aa18.39■□□□□ 0.53
CCDC188-202ENST00000444532 FASLGP48023 281 aa18.39■□□□□ 0.53
CCDC188-202ENST00000444532 B4GALNT1Q00973 533 aa18.39■□□□□ 0.53
CCDC188-202ENST00000444532 GTF2H3Q13889 308 aa18.39■□□□□ 0.53
CCDC188-202ENST00000444532 DRICH1Q6PGQ1 229 aaPredicted RBP18.39■□□□□ 0.53
CCDC188-202ENST00000444532 LINC00523Q86TU6 105 aa18.39■□□□□ 0.53
CCDC188-202ENST00000444532 SFRP1Q8N474 314 aa18.39■□□□□ 0.53
CCDC188-202ENST00000444532 ZNF398Q8TD17 642 aa18.39■□□□□ 0.53
CCDC188-202ENST00000444532 ATXN7L3BQ96GX2 97 aa18.39■□□□□ 0.53
CCDC188-202ENST00000444532 TTC25Q96NG3 672 aa18.39■□□□□ 0.53
CCDC188-202ENST00000444532 ZCCHC2Q9C0B9 1178 aaKnown RBP18.39■□□□□ 0.53
CCDC188-202ENST00000444532 UGT1A7Q9HAW7 530 aa18.39■□□□□ 0.53
CCDC188-202ENST00000444532 UGT1A10Q9HAW8 530 aa18.39■□□□□ 0.53
CCDC188-202ENST00000444532 UGT1A8Q9HAW9 530 aa18.39■□□□□ 0.53
CCDC188-202ENST00000444532 TBC1D29Q9UFV1 150 aa18.39■□□□□ 0.53
CCDC188-202ENST00000444532 KCNK6Q9Y257 313 aa18.39■□□□□ 0.53
CCDC188-202ENST00000444532 OR5K4A6NMS3 321 aa18.38■□□□□ 0.53
CCDC188-202ENST00000444532 PPM1DO15297 605 aa18.38■□□□□ 0.53
CCDC188-202ENST00000444532 B4GAT1O43505 415 aa18.38■□□□□ 0.53
CCDC188-202ENST00000444532 BRINP1O60477 761 aa18.38■□□□□ 0.53
CCDC188-202ENST00000444532 MTX2O75431 263 aa18.38■□□□□ 0.53
CCDC188-202ENST00000444532 ZNF7P17097 686 aaPredicted RBP18.38■□□□□ 0.53
CCDC188-202ENST00000444532 ALDH4A1P30038 563 aa18.38■□□□□ 0.53
CCDC188-202ENST00000444532 FDFT1P37268 417 aa18.38■□□□□ 0.53
CCDC188-202ENST00000444532 HADHAP40939 763 aa18.38■□□□□ 0.53
CCDC188-202ENST00000444532 SNX1Q13596 522 aa18.38■□□□□ 0.53
CCDC188-202ENST00000444532 PTPRCAPQ14761 206 aa18.38■□□□□ 0.53
CCDC188-202ENST00000444532 SIX1Q15475 284 aaPredicted RBP18.38■□□□□ 0.53
CCDC188-202ENST00000444532 CLPPQ16740 277 aaPredicted RBP18.38■□□□□ 0.53
CCDC188-202ENST00000444532 KHDC1Q4VXA5 237 aaKnown RBP18.38■□□□□ 0.53
CCDC188-202ENST00000444532 IYDQ6PHW0 289 aa18.38■□□□□ 0.53
CCDC188-202ENST00000444532 DDHD1Q8NEL9 900 aa18.38■□□□□ 0.53
CCDC188-202ENST00000444532 ANP32BQ92688 251 aaKnown RBP18.38■□□□□ 0.53
CCDC188-202ENST00000444532 LIN37Q96GY3 246 aaPredicted RBP18.38■□□□□ 0.53
CCDC188-202ENST00000444532 TMEM74Q96NL1 305 aa18.38■□□□□ 0.53
CCDC188-202ENST00000444532 TIMM29Q9BSF4 260 aa18.38■□□□□ 0.53
CCDC188-202ENST00000444532 KLC4Q9NSK0 619 aa18.38■□□□□ 0.53
CCDC188-202ENST00000444532 SMOXQ9NWM0 555 aa18.38■□□□□ 0.53
CCDC188-202ENST00000444532 DRG1Q9Y295 367 aaKnown RBP18.38■□□□□ 0.53
CCDC188-202ENST00000444532 JRKLQ9Y4A0 524 aa18.38■□□□□ 0.53
CCDC188-202ENST00000444532 KCTD3Q9Y597 815 aa18.38■□□□□ 0.53
CCDC188-202ENST00000444532 UNC13CQ8NB66 2214 aa18.38■□□□□ 0.53
CCDC188-202ENST00000444532 BPTFQ12830 3046 aa18.38■□□□□ 0.53
CCDC188-202ENST00000444532 WDFY3Q8IZQ1 3526 aa18.37■□□□□ 0.53
CCDC188-202ENST00000444532 LDB2O43679 373 aa18.37■□□□□ 0.53
CCDC188-202ENST00000444532 KCNJ13O60928 360 aa18.37■□□□□ 0.53
CCDC188-202ENST00000444532 SRP72O76094 671 aaKnown RBP18.37■□□□□ 0.53
CCDC188-202ENST00000444532 DXOO77932 396 aaKnown RBP18.37■□□□□ 0.53
CCDC188-202ENST00000444532 PRAMEF1O95521 474 aa18.37■□□□□ 0.53
CCDC188-202ENST00000444532 EML2O95834 649 aa18.37■□□□□ 0.53
CCDC188-202ENST00000444532 IFNB1P01574 187 aa18.37■□□□□ 0.53
CCDC188-202ENST00000444532 FGGP02679 453 aa18.37■□□□□ 0.53
CCDC188-202ENST00000444532 MPOP05164 745 aa18.37■□□□□ 0.53
CCDC188-202ENST00000444532 F3P13726 295 aa18.37■□□□□ 0.53
CCDC188-202ENST00000444532 CCKBRP32239 447 aa18.37■□□□□ 0.53
CCDC188-202ENST00000444532 PDX1P52945 283 aa18.37■□□□□ 0.53
CCDC188-202ENST00000444532 INHBCP55103 352 aa18.37■□□□□ 0.53
CCDC188-202ENST00000444532 OR1D5P58170 312 aa18.37■□□□□ 0.53
CCDC188-202ENST00000444532 GABREP78334 506 aa18.37■□□□□ 0.53
CCDC188-202ENST00000444532 INSCQ1MX18 579 aa18.37■□□□□ 0.53
CCDC188-202ENST00000444532 IGF2-ASQ6U949 168 aa18.37■□□□□ 0.53
CCDC188-202ENST00000444532 CRTC3Q6UUV7 619 aa18.37■□□□□ 0.53
CCDC188-202ENST00000444532 ZNF547Q8IVP9 402 aa18.37■□□□□ 0.53
CCDC188-202ENST00000444532 AVL9Q8NBF6 648 aa18.37■□□□□ 0.53
CCDC188-202ENST00000444532 WDR36Q8NI36 951 aaKnown RBP18.37■□□□□ 0.53
CCDC188-202ENST00000444532 SLC37A2Q8TED4 501 aa18.37■□□□□ 0.53
CCDC188-202ENST00000444532 STRADBQ9C0K7 418 aa18.37■□□□□ 0.53
CCDC188-202ENST00000444532 ETNK1Q9HBU6 452 aa18.37■□□□□ 0.53
CCDC188-202ENST00000444532 SARS2Q9NP81 518 aaKnown RBP18.37■□□□□ 0.53
CCDC188-202ENST00000444532 HOMER3Q9NSC5 361 aa18.37■□□□□ 0.53
CCDC188-202ENST00000444532 SLC23A2Q9UGH3 650 aa18.37■□□□□ 0.53
CCDC188-202ENST00000444532 RAXQ9Y2V3 346 aa18.37■□□□□ 0.53
CCDC188-202ENST00000444532 TRBV23OR9-2A0A075B6M9 112 aa18.36■□□□□ 0.53
CCDC188-202ENST00000444532 CCDC187A0A096LP49 1063 aa18.36■□□□□ 0.53
CCDC188-202ENST00000444532 KIR2DS5A0A0G2JLQ3 304 aa18.36■□□□□ 0.53
CCDC188-202ENST00000444532 A0A0G2JNG1 304 aa18.36■□□□□ 0.53
CCDC188-202ENST00000444532 A6NCN8 305 aa18.36■□□□□ 0.53
CCDC188-202ENST00000444532 KIR2DS3K7RE56 304 aa18.36■□□□□ 0.53
CCDC188-202ENST00000444532 ZZEF1O43149 2961 aa18.36■□□□□ 0.53
CCDC188-202ENST00000444532 ZSCAN12O43309 604 aa18.36■□□□□ 0.53
CCDC188-202ENST00000444532 CEP104O60308 925 aa18.36■□□□□ 0.53
CCDC188-202ENST00000444532 SNX2O60749 519 aa18.36■□□□□ 0.53
CCDC188-202ENST00000444532 CPNE6O95741 557 aa18.36■□□□□ 0.53
CCDC188-202ENST00000444532 VCLP18206 1134 aa18.36■□□□□ 0.53
CCDC188-202ENST00000444532 ZNF140P52738 457 aaPredicted RBP18.36■□□□□ 0.53
CCDC188-202ENST00000444532 ZFP36L1Q07352 338 aaKnown RBP18.36■□□□□ 0.53
CCDC188-202ENST00000444532 EIF3IQ13347 325 aaKnown RBP18.36■□□□□ 0.53
CCDC188-202ENST00000444532 SQSTM1Q13501 440 aa18.36■□□□□ 0.53
CCDC188-202ENST00000444532 KIR2DS5Q14953 304 aa18.36■□□□□ 0.53
CCDC188-202ENST00000444532 C3orf38Q5JPI3 329 aa18.36■□□□□ 0.53
CCDC188-202ENST00000444532 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.36■□□□□ 0.53
CCDC188-202ENST00000444532 GPRC6AQ5T6X5 926 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms