RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 JADE3Q92613 823 aa10.53□□□□□ -0.72
TOP3B-210ENST00000444502 ESAMQ96AP7 390 aa10.53□□□□□ -0.72
TOP3B-210ENST00000444502 CNDP1Q96KN2 507 aa10.53□□□□□ -0.72
TOP3B-210ENST00000444502 RUBCNLQ9H714 662 aa10.53□□□□□ -0.72
TOP3B-210ENST00000444502 DDX28Q9NUL7 540 aaKnown RBP10.53□□□□□ -0.72
TOP3B-210ENST00000444502 ATAD3AQ9NVI7 634 aa10.53□□□□□ -0.72
TOP3B-210ENST00000444502 PCP4L1A6NKN8 68 aa10.53□□□□□ -0.72
TOP3B-210ENST00000444502 TMEM114B3SHH9 223 aa10.53□□□□□ -0.72
TOP3B-210ENST00000444502 CD3EAPO15446 510 aaKnown RBP10.53□□□□□ -0.72
TOP3B-210ENST00000444502 PABPC4LP0CB38 370 aaKnown RBP10.53□□□□□ -0.72
TOP3B-210ENST00000444502 MYCLP1P12525 358 aaPredicted RBP10.53□□□□□ -0.72
TOP3B-210ENST00000444502 HLA-DPA1P20036 260 aa10.53□□□□□ -0.72
TOP3B-210ENST00000444502 FGFR3P22607 806 aa10.53□□□□□ -0.72
TOP3B-210ENST00000444502 GDI1P31150 447 aa10.53□□□□□ -0.72
TOP3B-210ENST00000444502 HNF4AP41235 474 aa10.53□□□□□ -0.72
TOP3B-210ENST00000444502 ETV4P43268 484 aa10.53□□□□□ -0.72
TOP3B-210ENST00000444502 DPYSQ14117 519 aa10.53□□□□□ -0.72
TOP3B-210ENST00000444502 PDCD4Q53EL6 469 aaKnown RBP10.53□□□□□ -0.72
TOP3B-210ENST00000444502 RBM20Q5T481 1227 aaKnown RBP10.53□□□□□ -0.72
TOP3B-210ENST00000444502 OR4L1Q8NH43 312 aa10.53□□□□□ -0.72
TOP3B-210ENST00000444502 FNDC8Q8TC99 324 aa10.53□□□□□ -0.72
TOP3B-210ENST00000444502 OR8D1Q8WZ84 308 aa10.53□□□□□ -0.72
TOP3B-210ENST00000444502 MTFMTQ96DP5 389 aaKnown RBP10.53□□□□□ -0.72
TOP3B-210ENST00000444502 RTP4Q96DX8 246 aa10.53□□□□□ -0.72
TOP3B-210ENST00000444502 ZFYVE19Q96K21 471 aa10.53□□□□□ -0.72
TOP3B-210ENST00000444502 FCRL5Q96RD9 977 aa10.53□□□□□ -0.72
TOP3B-210ENST00000444502 SH3GL1Q99961 368 aa10.53□□□□□ -0.72
TOP3B-210ENST00000444502 TRIM15Q9C019 465 aa10.53□□□□□ -0.72
TOP3B-210ENST00000444502 ZCCHC2Q9C0B9 1178 aaKnown RBP10.53□□□□□ -0.72
TOP3B-210ENST00000444502 TDP1Q9NUW8 608 aa10.53□□□□□ -0.72
TOP3B-210ENST00000444502 RIC8BQ9NVN3 520 aa10.53□□□□□ -0.72
TOP3B-210ENST00000444502 VPS51Q9UID3 782 aa10.53□□□□□ -0.72
TOP3B-210ENST00000444502 HAS3O00219 553 aa10.52□□□□□ -0.72
TOP3B-210ENST00000444502 FGF3P11487 239 aaPredicted RBP10.52□□□□□ -0.72
TOP3B-210ENST00000444502 PRKAA2P54646 552 aa10.52□□□□□ -0.72
TOP3B-210ENST00000444502 ABRQ12979 859 aa10.52□□□□□ -0.72
TOP3B-210ENST00000444502 HNRNPDQ14103 355 aaKnown RBP10.52□□□□□ -0.72
TOP3B-210ENST00000444502 ALFQ53S48 1182 aa10.52□□□□□ -0.72
TOP3B-210ENST00000444502 MBLAC2Q68D91 279 aa10.52□□□□□ -0.72
TOP3B-210ENST00000444502 ZC3HC1Q86WB0 502 aaKnown RBP10.52□□□□□ -0.72
TOP3B-210ENST00000444502 OR14C36Q8NHC7 312 aa10.52□□□□□ -0.72
TOP3B-210ENST00000444502 HAPLN3Q96S86 360 aa10.52□□□□□ -0.72
TOP3B-210ENST00000444502 COPS8Q99627 209 aa10.52□□□□□ -0.72
TOP3B-210ENST00000444502 OSBPL2Q9H1P3 480 aa10.52□□□□□ -0.72
TOP3B-210ENST00000444502 WDR6Q9NNW5 1121 aaKnown RBP10.52□□□□□ -0.72
TOP3B-210ENST00000444502 IL23AQ9NPF7 189 aa10.52□□□□□ -0.72
TOP3B-210ENST00000444502 PCDH12Q9NPG4 1184 aa10.52□□□□□ -0.72
TOP3B-210ENST00000444502 FADS3Q9Y5Q0 445 aa10.52□□□□□ -0.72
TOP3B-210ENST00000444502 NUMA1Q14980 2115 aa10.52□□□□□ -0.72
TOP3B-210ENST00000444502 C2orf78A6NCI8 922 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 IQCF5A8MTL0 148 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 SLC31A1O15431 190 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 ZBTB11O95625 1053 aaPredicted RBP10.52□□□□□ -0.73
TOP3B-210ENST00000444502 T-ENOLP0DO92 83 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 MAPK8P45983 427 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 GRM2Q14416 872 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 HIST2H2ACQ16777 129 aaPredicted RBP10.52□□□□□ -0.73
TOP3B-210ENST00000444502 HIST2H2AA3Q6FI13 130 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 PAOXQ6QHF9 649 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 CUZD1Q86UP6 607 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 MIER2Q8N344 545 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 TBC1D19Q8N5T2 526 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 MCOLN3Q8TDD5 553 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 C2orf15Q8WU43 125 aaKnown RBP10.52□□□□□ -0.73
TOP3B-210ENST00000444502 MAGEH1Q9H213 219 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 DMTF1Q9Y222 760 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 NUP205Q92621 2012 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 OR2AG2A6NM03 316 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 FFAR3O14843 346 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 GPR42O15529 346 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 NDST3O95803 873 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 DNTTP04053 509 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 CNPP09543 421 aaKnown RBP10.52□□□□□ -0.73
TOP3B-210ENST00000444502 FAM58BPP0C7Q3 252 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 HCAR3P49019 387 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 MRPS15P82914 257 aaKnown RBP10.52□□□□□ -0.73
TOP3B-210ENST00000444502 CAP1Q01518 475 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 NFYCQ13952 458 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 MAPK11Q15759 364 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 LY6G5CQ5SRR4 150 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 TSTD2Q5T7W7 516 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 GPSM1Q86YR5 675 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 CROCCP3Q8IVE0 287 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 C2orf73Q8N5S3 287 aaPredicted RBP10.52□□□□□ -0.73
TOP3B-210ENST00000444502 OR13C4Q8NGS5 318 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 KLHL32Q96NJ5 620 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 PANX3Q96QZ0 392 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 NOL6Q9H6R4 1146 aaKnown RBP10.52□□□□□ -0.73
TOP3B-210ENST00000444502 VPS45Q9NRW7 570 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 KNTC1P50748 2209 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 ANKRD12Q6UB98 2062 aa10.52□□□□□ -0.73
TOP3B-210ENST00000444502 NOTOA8MTQ0 251 aa10.51□□□□□ -0.73
TOP3B-210ENST00000444502 KLF11O14901 512 aa10.51□□□□□ -0.73
TOP3B-210ENST00000444502 CTSEP14091 401 aa10.51□□□□□ -0.73
TOP3B-210ENST00000444502 VARSP26640 1264 aaKnown RBP10.51□□□□□ -0.73
TOP3B-210ENST00000444502 ADAM17P78536 824 aa10.51□□□□□ -0.73
TOP3B-210ENST00000444502 NRF1Q16656 503 aa10.51□□□□□ -0.73
TOP3B-210ENST00000444502 PLA2G4EQ3MJ16 856 aa10.51□□□□□ -0.73
TOP3B-210ENST00000444502 SFT2D3Q587I9 215 aa10.51□□□□□ -0.73
TOP3B-210ENST00000444502 ZYG11AQ6WRX3 759 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms