RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 PKP3Q9Y446 797 aa18.61■□□□□ 0.57
ATPAF2-201ENST00000444058 PRKAB1Q9Y478 270 aa18.61■□□□□ 0.57
ATPAF2-201ENST00000444058 PCDHGA7Q9Y5G6 932 aa18.61■□□□□ 0.57
ATPAF2-201ENST00000444058 CAPN6Q9Y6Q1 641 aa18.61■□□□□ 0.57
ATPAF2-201ENST00000444058 UNC13CQ8NB66 2214 aa18.61■□□□□ 0.57
ATPAF2-201ENST00000444058 ITPR1Q14643 2758 aa18.6■□□□□ 0.57
ATPAF2-201ENST00000444058 KIR2DS5A0A0G2JLQ3 304 aa18.6■□□□□ 0.57
ATPAF2-201ENST00000444058 A0A0G2JNG1 304 aa18.6■□□□□ 0.57
ATPAF2-201ENST00000444058 KIR2DS3K7RE56 304 aa18.6■□□□□ 0.57
ATPAF2-201ENST00000444058 TNFSF15O95150 251 aa18.6■□□□□ 0.57
ATPAF2-201ENST00000444058 AGTP01019 485 aa18.6■□□□□ 0.57
ATPAF2-201ENST00000444058 ACP5P13686 325 aa18.6■□□□□ 0.57
ATPAF2-201ENST00000444058 F3P13726 295 aa18.6■□□□□ 0.57
ATPAF2-201ENST00000444058 CD1CP29017 333 aa18.6■□□□□ 0.57
ATPAF2-201ENST00000444058 SPAM1P38567 509 aa18.6■□□□□ 0.57
ATPAF2-201ENST00000444058 OR1D5P58170 312 aa18.6■□□□□ 0.57
ATPAF2-201ENST00000444058 GPLD1P80108 840 aa18.6■□□□□ 0.57
ATPAF2-201ENST00000444058 KIR2DS5Q14953 304 aa18.6■□□□□ 0.57
ATPAF2-201ENST00000444058 ATP13A5Q4VNC0 1218 aa18.6■□□□□ 0.57
ATPAF2-201ENST00000444058 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.6■□□□□ 0.57
ATPAF2-201ENST00000444058 FBXO39Q8N4B4 442 aa18.6■□□□□ 0.57
ATPAF2-201ENST00000444058 SLC37A2Q8TED4 501 aa18.6■□□□□ 0.57
ATPAF2-201ENST00000444058 SH3KBP1Q96B97 665 aa18.6■□□□□ 0.57
ATPAF2-201ENST00000444058 LRRC45Q96CN5 670 aa18.6■□□□□ 0.57
ATPAF2-201ENST00000444058 CCDC97Q96F63 343 aaPredicted RBP18.6■□□□□ 0.57
ATPAF2-201ENST00000444058 CMKLR1Q99788 373 aa18.6■□□□□ 0.57
ATPAF2-201ENST00000444058 DPH1Q9BZG8 443 aa18.6■□□□□ 0.57
ATPAF2-201ENST00000444058 TBC1D29Q9UFV1 150 aa18.6■□□□□ 0.57
ATPAF2-201ENST00000444058 FEZ2Q9UHY8 353 aaPredicted RBP18.6■□□□□ 0.57
ATPAF2-201ENST00000444058 TMPRSS11EQ9UL52 423 aa18.6■□□□□ 0.57
ATPAF2-201ENST00000444058 ATXN7L1Q9ULK2 861 aaPredicted RBP18.6■□□□□ 0.57
ATPAF2-201ENST00000444058 PACSIN2Q9UNF0 486 aaPredicted RBP18.6■□□□□ 0.57
ATPAF2-201ENST00000444058 IGHV1OR21-1A0A087WYE8 117 aa18.59■□□□□ 0.57
ATPAF2-201ENST00000444058 GLYATL1P3A0A0U1RQE8 302 aa18.59■□□□□ 0.57
ATPAF2-201ENST00000444058 F5H423 210 aaPredicted RBP18.59■□□□□ 0.57
ATPAF2-201ENST00000444058 KMOO15229 486 aa18.59■□□□□ 0.57
ATPAF2-201ENST00000444058 CDK14O94921 469 aa18.59■□□□□ 0.57
ATPAF2-201ENST00000444058 ITPKBP27987 946 aa18.59■□□□□ 0.57
ATPAF2-201ENST00000444058 PSMB4P28070 264 aa18.59■□□□□ 0.57
ATPAF2-201ENST00000444058 UGT1A5P35504 534 aa18.59■□□□□ 0.57
ATPAF2-201ENST00000444058 TLE3Q04726 772 aa18.59■□□□□ 0.57
ATPAF2-201ENST00000444058 ITGA9Q13797 1035 aa18.59■□□□□ 0.57
ATPAF2-201ENST00000444058 TAF1AQ15573 450 aaPredicted RBP18.59■□□□□ 0.57
ATPAF2-201ENST00000444058 MAP9Q49MG5 647 aa18.59■□□□□ 0.57
ATPAF2-201ENST00000444058 ZNF662Q6ZS27 426 aa18.59■□□□□ 0.57
ATPAF2-201ENST00000444058 PDZD3Q86UT5 571 aa18.59■□□□□ 0.57
ATPAF2-201ENST00000444058 LRRTM4Q86VH4 590 aa18.59■□□□□ 0.57
ATPAF2-201ENST00000444058 SPACA3Q8IXA5 215 aa18.59■□□□□ 0.57
ATPAF2-201ENST00000444058 SLC35B2Q8TB61 432 aa18.59■□□□□ 0.57
ATPAF2-201ENST00000444058 CCDC110Q8TBZ0 833 aa18.59■□□□□ 0.57
ATPAF2-201ENST00000444058 FAM118BQ9BPY3 351 aa18.59■□□□□ 0.57
ATPAF2-201ENST00000444058 TIMM29Q9BSF4 260 aa18.59■□□□□ 0.57
ATPAF2-201ENST00000444058 FICDQ9BVA6 458 aa18.59■□□□□ 0.57
ATPAF2-201ENST00000444058 STN1Q9H668 368 aaKnown RBP18.59■□□□□ 0.57
ATPAF2-201ENST00000444058 RDH14Q9HBH5 336 aa18.59■□□□□ 0.57
ATPAF2-201ENST00000444058 ARNT2Q9HBZ2 717 aa18.59■□□□□ 0.57
ATPAF2-201ENST00000444058 SMOXQ9NWM0 555 aa18.59■□□□□ 0.57
ATPAF2-201ENST00000444058 KCNK4Q9NYG8 393 aa18.59■□□□□ 0.57
ATPAF2-201ENST00000444058 KCNK6Q9Y257 313 aa18.59■□□□□ 0.57
ATPAF2-201ENST00000444058 PRR19A6NJB7 356 aa18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 C2orf81A6NN90 581 aa18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 HGSO14964 777 aaPredicted RBP18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 STX7O15400 261 aaKnown RBP18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 KCNJ13O60928 360 aa18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 EML2O95834 649 aa18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 LPOP22079 712 aaPredicted RBP18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 PDE1BQ01064 536 aa18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 HHEXQ03014 270 aa18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 TMEM115Q12893 351 aaPredicted RBP18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 TRA2AQ13595 282 aaKnown RBP eCLIP18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 PARP6Q2NL67 630 aa18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 AMZ1Q400G9 498 aa18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 LDLRAP1Q5SW96 308 aa18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 ZNF648Q5T619 568 aaPredicted RBP18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 USP53Q70EK8 1073 aa18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 TMPRSS9Q7Z410 1059 aa18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 SLC9B2Q86UD5 537 aa18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 OR4D9Q8NGE8 314 aa18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 KCNE4Q8WWG9 221 aa18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 SLC38A3Q99624 504 aa18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 FRMD8P1Q9BZ68 369 aaPredicted RBP18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 ZCCHC2Q9C0B9 1178 aaKnown RBP18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 B3GNT4Q9C0J1 378 aa18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 ARFGAP3Q9NP61 516 aa18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 KLC4Q9NSK0 619 aa18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 AKAP7Q9P0M2 348 aaPredicted RBP18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 ACSL6Q9UKU0 697 aa18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 SSUH2Q9Y2M2 353 aa18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 LOXL2Q9Y4K0 774 aa18.58■□□□□ 0.56
ATPAF2-201ENST00000444058 SCN8AQ9UQD0 1980 aa18.57■□□□□ 0.56
ATPAF2-201ENST00000444058 PMS2P1A4D2B8 440 aa18.57■□□□□ 0.56
ATPAF2-201ENST00000444058 JMJD7P0C870 316 aa18.57■□□□□ 0.56
ATPAF2-201ENST00000444058 ZNF7P17097 686 aaPredicted RBP18.57■□□□□ 0.56
ATPAF2-201ENST00000444058 LIMK2P53671 638 aa18.57■□□□□ 0.56
ATPAF2-201ENST00000444058 EPHA4P54764 986 aa18.57■□□□□ 0.56
ATPAF2-201ENST00000444058 UCNP55089 124 aa18.57■□□□□ 0.56
ATPAF2-201ENST00000444058 CCDC173Q0VFZ6 552 aa18.57■□□□□ 0.56
ATPAF2-201ENST00000444058 MSLNQ13421 630 aaPredicted RBP18.57■□□□□ 0.56
ATPAF2-201ENST00000444058 GTF2H3Q13889 308 aa18.57■□□□□ 0.56
ATPAF2-201ENST00000444058 CHRNA6Q15825 494 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms