RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 MYL9P24844 172 aa4.99□□□□□ -1.61
HERC1-201ENST00000443617 GRM5P41594 1212 aa4.99□□□□□ -1.61
HERC1-201ENST00000443617 OR3A3P47888 321 aa4.99□□□□□ -1.61
HERC1-201ENST00000443617 CBLBQ13191 982 aa4.99□□□□□ -1.61
HERC1-201ENST00000443617 PCID2Q5JVF3 399 aa4.99□□□□□ -1.61
HERC1-201ENST00000443617 MZT2BQ6NZ67 158 aa4.99□□□□□ -1.61
HERC1-201ENST00000443617 ZNF517Q6ZMY9 492 aaPredicted RBP4.99□□□□□ -1.61
HERC1-201ENST00000443617 OTOP3Q7RTS5 596 aa4.99□□□□□ -1.61
HERC1-201ENST00000443617 NETO2Q8NC67 525 aa4.99□□□□□ -1.61
HERC1-201ENST00000443617 SNAPC3Q92966 411 aa4.99□□□□□ -1.61
HERC1-201ENST00000443617 RPL10LQ96L21 214 aaKnown RBP4.99□□□□□ -1.61
HERC1-201ENST00000443617 GPR22Q99680 433 aa4.99□□□□□ -1.61
HERC1-201ENST00000443617 ROGDIQ9GZN7 287 aa4.99□□□□□ -1.61
HERC1-201ENST00000443617 FADS2P1A8MWK0 482 aa4.99□□□□□ -1.61
HERC1-201ENST00000443617 PDPK1O15530 556 aa4.99□□□□□ -1.61
HERC1-201ENST00000443617 B4GALT4O60513 344 aa4.99□□□□□ -1.61
HERC1-201ENST00000443617 NFICP08651 508 aa4.99□□□□□ -1.61
HERC1-201ENST00000443617 PCSK7Q16549 785 aa4.99□□□□□ -1.61
HERC1-201ENST00000443617 PDZK1Q5T2W1 519 aa4.99□□□□□ -1.61
HERC1-201ENST00000443617 NAPEPLDQ6IQ20 393 aa4.99□□□□□ -1.61
HERC1-201ENST00000443617 ENPP6Q6UWR7 440 aa4.99□□□□□ -1.61
HERC1-201ENST00000443617 STX19Q8N4C7 294 aa4.99□□□□□ -1.61
HERC1-201ENST00000443617 FRS2Q8WU20 508 aa4.99□□□□□ -1.61
HERC1-201ENST00000443617 TRIM45Q9H8W5 580 aaPredicted RBP4.99□□□□□ -1.61
HERC1-201ENST00000443617 BTRCQ9Y297 605 aa4.99□□□□□ -1.61
HERC1-201ENST00000443617 LACTBL1A8MY62 500 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 GPX3P22352 226 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 SHMT2P34897 504 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 CCT3P49368 545 aaKnown RBP4.98□□□□□ -1.61
HERC1-201ENST00000443617 MLLT10P55197 1068 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 MVKQ03426 396 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 ZNF534Q76KX8 674 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 FAM131BQ86XD5 332 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 LRRC3Q9BY71 257 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 CLPBQ9H078 707 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 ZNF219Q9P2Y4 722 aaPredicted RBP4.98□□□□□ -1.61
HERC1-201ENST00000443617 SLC1A7O00341 560 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 CILPO75339 1184 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 CNPP09543 421 aaKnown RBP4.98□□□□□ -1.61
HERC1-201ENST00000443617 M6PRP20645 277 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 SULT1E1P49888 294 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 LAMTOR4Q0VGL1 99 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 TARDBPQ13148 414 aaKnown RBP eCLIP4.98□□□□□ -1.617e-7■■■■□ 24.2
HERC1-201ENST00000443617 XKRXQ6PP77 449 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 GDPD3Q7L5L3 318 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 B3GNT8Q7Z7M8 397 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 ARNTL2Q8WYA1 636 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 C8orf37Q96NL8 207 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 CHCHD6Q9BRQ6 235 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 KIFC1Q9BW19 673 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 PRDM12Q9H4Q4 367 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 DTLQ9NZJ0 730 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 SEC16AO15027 2179 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 PTPRJQ12913 1337 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 ARPC4-TTLL3A0A0A6YYG9 625 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 HMX3A6NHT5 357 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 NME4O00746 187 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 ALPLP05186 524 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 CYP2A7P20853 494 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 NOS2P35228 1153 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 CACHD1Q5VU97 1274 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 SLC16A12Q6ZSM3 486 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 TAS1R3Q7RTX0 852 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 SLC51BQ86UW2 128 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 FAM126BQ8IXS8 530 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 ATG16L2Q8NAA4 619 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 FAM83FQ8NEG4 500 aaPredicted RBP4.98□□□□□ -1.61
HERC1-201ENST00000443617 RNF139Q8WU17 664 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 FAM167AQ96KS9 214 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 BAZ2AQ9UIF9 1905 aaKnown RBP4.98□□□□□ -1.61
HERC1-201ENST00000443617 ORC5O43913 435 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 TSPAN8P19075 237 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 CD83Q01151 205 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 IFITM2Q01629 132 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 EMX1Q04741 257 aaPredicted RBP4.98□□□□□ -1.61
HERC1-201ENST00000443617 CDK10Q15131 360 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 BTBD16Q32M84 506 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 GCNT7Q6ZNI0 430 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 LSMEM1Q8N8F7 131 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 OR6B3Q8NGW1 331 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 KIF12Q96FN5 646 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 PPP1R2P1Q96PQ5 205 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 MRPL45Q9BRJ2 306 aaKnown RBP4.98□□□□□ -1.61
HERC1-201ENST00000443617 SDR39U1Q9NRG7 319 aaPredicted RBP4.98□□□□□ -1.61
HERC1-201ENST00000443617 MAU2Q9Y6X3 613 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 A0A1W2PQ67 120 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 PRLP01236 227 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 CYP11A1P05108 521 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 SUPT20HL2P0C7V6 817 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 NUDT1P36639 197 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 DDOSTP39656 456 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 SUPT20HL1Q3ZLR7 823 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 RAB6CQ53S08 254 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 VSIG10LQ86VR7 867 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 LYSMD2Q8IV50 215 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 TSPEARQ8WU66 669 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 MTERF3Q96E29 417 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 RAB6CQ9H0N0 254 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 KDM3BQ7LBC6 1761 aa4.98□□□□□ -1.61
HERC1-201ENST00000443617 SPATA31C2B4DYI2 1134 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms