RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 SCIMPQ6UWF3 145 aa20.15■□□□□ 0.82
SHOX2-203ENST00000441443 RBM23Q86U06 439 aaKnown RBP20.15■□□□□ 0.82
SHOX2-203ENST00000441443 CLIP4Q8N3C7 705 aa20.15■□□□□ 0.82
SHOX2-203ENST00000441443 NSMCE2Q96MF7 247 aa20.15■□□□□ 0.82
SHOX2-203ENST00000441443 ERVK-6Q9BXR3 956 aa20.15■□□□□ 0.82
SHOX2-203ENST00000441443 FAM118AQ9NWS6 357 aa20.15■□□□□ 0.82
SHOX2-203ENST00000441443 PAK1IP1Q9NWT1 392 aaPredicted RBP20.15■□□□□ 0.82
SHOX2-203ENST00000441443 KLHL3Q9UH77 587 aa20.15■□□□□ 0.82
SHOX2-203ENST00000441443 TIMM22Q9Y584 194 aa20.15■□□□□ 0.82
SHOX2-203ENST00000441443 CAPN15O75808 1086 aa20.14■□□□□ 0.82
SHOX2-203ENST00000441443 PFKFB4Q16877 469 aa20.14■□□□□ 0.82
SHOX2-203ENST00000441443 HABP4Q5JVS0 413 aaKnown RBP20.14■□□□□ 0.82
SHOX2-203ENST00000441443 C9orf57Q5W0N0 161 aa20.14■□□□□ 0.82
SHOX2-203ENST00000441443 MINDY2Q8NBR6 621 aa20.14■□□□□ 0.82
SHOX2-203ENST00000441443 S100ZQ8WXG8 99 aa20.14■□□□□ 0.82
SHOX2-203ENST00000441443 L3HYPDHQ96EM0 354 aa20.14■□□□□ 0.82
SHOX2-203ENST00000441443 AMBRA1Q9C0C7 1298 aa20.14■□□□□ 0.82
SHOX2-203ENST00000441443 MRM3Q9HC36 420 aaKnown RBP20.14■□□□□ 0.82
SHOX2-203ENST00000441443 FBXW11Q9UKB1 542 aa20.14■□□□□ 0.82
SHOX2-203ENST00000441443 MATN4O95460 622 aa20.14■□□□□ 0.81
SHOX2-203ENST00000441443 C1RP00736 705 aa20.14■□□□□ 0.81
SHOX2-203ENST00000441443 MAP3K7CLP57077 242 aa20.14■□□□□ 0.81
SHOX2-203ENST00000441443 UFM1P61960 85 aa20.14■□□□□ 0.81
SHOX2-203ENST00000441443 LAPTM5Q13571 262 aa20.14■□□□□ 0.81
SHOX2-203ENST00000441443 RIMKLAQ8IXN7 391 aa20.14■□□□□ 0.81
SHOX2-203ENST00000441443 NPLOC4Q8TAT6 608 aa20.14■□□□□ 0.81
SHOX2-203ENST00000441443 EDEM1Q92611 657 aa20.14■□□□□ 0.81
SHOX2-203ENST00000441443 DPF3Q92784 378 aa20.14■□□□□ 0.81
SHOX2-203ENST00000441443 TINF2Q9BSI4 451 aa20.14■□□□□ 0.81
SHOX2-203ENST00000441443 PMF1-BGLAPU3KQ54 211 aa20.14■□□□□ 0.81
SHOX2-203ENST00000441443 DNAJB2P25686 324 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 MTHFRP42898 656 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 FSCN1Q16658 493 aaKnown RBP20.13■□□□□ 0.81
SHOX2-203ENST00000441443 LAIR2Q6ISS4 152 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 ADCK1Q86TW2 530 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 DOCK3Q8IZD9 2030 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 VMP1Q96GC9 406 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 NODALQ96S42 347 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 ULBP1Q9BZM6 244 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 NOL6Q9H6R4 1146 aaKnown RBP20.13■□□□□ 0.81
SHOX2-203ENST00000441443 CPA4Q9UI42 421 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 CRYL1Q9Y2S2 319 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 LOC285556D6RIA3 1793 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 UBXN8O00124 270 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 DEAF1O75398 565 aaPredicted RBP20.13■□□□□ 0.81
SHOX2-203ENST00000441443 PLIN5Q00G26 463 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 FOXM1Q08050 763 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 DUSP28Q4G0W2 176 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 FBXO47Q5MNV8 452 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 LDLRAD1Q5T700 205 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 KIAA0930Q6ICG6 404 aaPredicted RBP20.13■□□□□ 0.81
SHOX2-203ENST00000441443 UGT3A1Q6NUS8 523 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 SLC27A1Q6PCB7 646 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 PRR23BQ6ZRT6 265 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 BEST2Q8NFU1 509 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 PSMA8Q8TAA3 256 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 SLC2A13Q96QE2 648 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 DUSP16Q9BY84 665 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 TKTL2Q9H0I9 626 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 GPR45Q9Y5Y3 372 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 XPNPEP2O43895 674 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 CNTN5O94779 1100 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 BEX3Q00994 111 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 CATSPEREQ5SY80 951 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 ATAD3BQ5T9A4 648 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 ZDHHC13Q8IUH4 622 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 TMEM40Q8WWA1 233 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 RMND5AQ9H871 391 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 MYLKQ15746 1914 aa20.13■□□□□ 0.81
SHOX2-203ENST00000441443 SBF1O95248 1867 aa20.12■□□□□ 0.81
SHOX2-203ENST00000441443 CCDC154A6NI56 674 aa20.12■□□□□ 0.81
SHOX2-203ENST00000441443 PSMD3O43242 534 aa20.12■□□□□ 0.81
SHOX2-203ENST00000441443 TBC1D4O60343 1298 aa20.12■□□□□ 0.81
SHOX2-203ENST00000441443 SERPINB1P30740 379 aa20.12■□□□□ 0.81
SHOX2-203ENST00000441443 ADAM17P78536 824 aa20.12■□□□□ 0.81
SHOX2-203ENST00000441443 IFITM2Q01629 132 aa20.12■□□□□ 0.81
SHOX2-203ENST00000441443 KYAT1Q16773 422 aa20.12■□□□□ 0.81
SHOX2-203ENST00000441443 ABI1Q8IZP0 508 aa20.12■□□□□ 0.81
SHOX2-203ENST00000441443 LGI2Q8N0V4 545 aa20.12■□□□□ 0.81
SHOX2-203ENST00000441443 FAM86B1Q8N7N1 296 aa20.12■□□□□ 0.81
SHOX2-203ENST00000441443 BTN2A3PQ96KV6 586 aa20.12■□□□□ 0.81
SHOX2-203ENST00000441443 MBOAT4Q96T53 435 aa20.12■□□□□ 0.81
SHOX2-203ENST00000441443 KATNBL1Q9H079 304 aa20.12■□□□□ 0.81
SHOX2-203ENST00000441443 MUC13Q9H3R2 512 aa20.12■□□□□ 0.81
SHOX2-203ENST00000441443 GLOD4Q9HC38 313 aa20.12■□□□□ 0.81
SHOX2-203ENST00000441443 LRRC37A2A6NM11 1700 aa20.12■□□□□ 0.81
SHOX2-203ENST00000441443 G3V2T6 193 aa20.12■□□□□ 0.81
SHOX2-203ENST00000441443 SMIM10L2AP0DMW4 78 aa20.12■□□□□ 0.81
SHOX2-203ENST00000441443 SMIM10L2BP0DMW5 78 aa20.12■□□□□ 0.81
SHOX2-203ENST00000441443 DNAJC14Q6Y2X3 702 aaPredicted RBP20.12■□□□□ 0.81
SHOX2-203ENST00000441443 B3GALNT2Q8NCR0 500 aa20.12■□□□□ 0.81
SHOX2-203ENST00000441443 SIK2Q9H0K1 926 aa20.12■□□□□ 0.81
SHOX2-203ENST00000441443 SPC25Q9HBM1 224 aa20.12■□□□□ 0.81
SHOX2-203ENST00000441443 GDAP2Q9NXN4 497 aa20.12■□□□□ 0.81
SHOX2-203ENST00000441443 SLCO3A1Q9UIG8 710 aa20.12■□□□□ 0.81
SHOX2-203ENST00000441443 OR51F1A6NGY5 319 aa20.11■□□□□ 0.81
SHOX2-203ENST00000441443 ZNF99A8MXY4 864 aaPredicted RBP20.11■□□□□ 0.81
SHOX2-203ENST00000441443 ANXA9O76027 345 aa20.11■□□□□ 0.81
SHOX2-203ENST00000441443 CDH1P12830 882 aa20.11■□□□□ 0.81
SHOX2-203ENST00000441443 NPR3P17342 541 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms