RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 MYOD1P15172 320 aa4.79□□□□□ -1.64
PFDN4-202ENST00000441080 ACTN2P35609 894 aa4.79□□□□□ -1.64
PFDN4-202ENST00000441080 USP8P40818 1118 aa4.79□□□□□ -1.64
PFDN4-202ENST00000441080 COASYQ13057 564 aa4.79□□□□□ -1.64
PFDN4-202ENST00000441080 KCNC3Q14003 757 aa4.79□□□□□ -1.64
PFDN4-202ENST00000441080 KRTCAP3Q53RY4 240 aa4.79□□□□□ -1.64
PFDN4-202ENST00000441080 TRNP1Q6NT89 227 aa4.79□□□□□ -1.64
PFDN4-202ENST00000441080 TMED8Q6PL24 325 aaPredicted RBP4.79□□□□□ -1.64
PFDN4-202ENST00000441080 GFRALQ6UXV0 394 aa4.79□□□□□ -1.64
PFDN4-202ENST00000441080 UNQ6126/PRO20091Q6UXV3 157 aa4.79□□□□□ -1.64
PFDN4-202ENST00000441080 BRINP3Q76B58 766 aa4.79□□□□□ -1.64
PFDN4-202ENST00000441080 SATL1Q86VE3 508 aa4.79□□□□□ -1.64
PFDN4-202ENST00000441080 MAP7D3Q8IWC1 876 aa4.79□□□□□ -1.64
PFDN4-202ENST00000441080 SCYL3Q8IZE3 742 aa4.79□□□□□ -1.64
PFDN4-202ENST00000441080 RASGEF1CQ8N431 466 aa4.79□□□□□ -1.64
PFDN4-202ENST00000441080 EMC1Q8N766 993 aa4.79□□□□□ -1.64
PFDN4-202ENST00000441080 GSDMBQ8TAX9 411 aa4.79□□□□□ -1.64
PFDN4-202ENST00000441080 UTP15Q8TED0 518 aaKnown RBP4.79□□□□□ -1.64
PFDN4-202ENST00000441080 SLC44A1Q8WWI5 657 aa4.79□□□□□ -1.64
PFDN4-202ENST00000441080 CDCA5Q96FF9 252 aa4.79□□□□□ -1.64
PFDN4-202ENST00000441080 RSRC1Q96IZ7 334 aaKnown RBP4.79□□□□□ -1.64
PFDN4-202ENST00000441080 IL17FQ96PD4 163 aa4.79□□□□□ -1.64
PFDN4-202ENST00000441080 SEMA3CQ99985 751 aa4.79□□□□□ -1.64
PFDN4-202ENST00000441080 NUDT16L1Q9BRJ7 211 aaKnown RBP4.79□□□□□ -1.64
PFDN4-202ENST00000441080 SLCO5A1Q9H2Y9 848 aa4.79□□□□□ -1.64
PFDN4-202ENST00000441080 HRH4Q9H3N8 390 aa4.79□□□□□ -1.64
PFDN4-202ENST00000441080 UBTD1Q9HAC8 227 aa4.79□□□□□ -1.64
PFDN4-202ENST00000441080 DBNLQ9UJU6 430 aaKnown RBP4.79□□□□□ -1.64
PFDN4-202ENST00000441080 TRIP12Q14669 1992 aaPredicted RBP4.78□□□□□ -1.64
PFDN4-202ENST00000441080 LILRA5A6NI73 299 aa4.78□□□□□ -1.64
PFDN4-202ENST00000441080 LRRC72A6NJI9 287 aa4.78□□□□□ -1.64
PFDN4-202ENST00000441080 PLPP2O43688 288 aa4.78□□□□□ -1.64
PFDN4-202ENST00000441080 MITFO75030 526 aaPredicted RBP4.78□□□□□ -1.64
PFDN4-202ENST00000441080 TMCC2O75069 709 aa4.78□□□□□ -1.64
PFDN4-202ENST00000441080 LDHCP07864 332 aa4.78□□□□□ -1.64
PFDN4-202ENST00000441080 SNRNP70P08621 437 aaKnown RBP4.78□□□□□ -1.64
PFDN4-202ENST00000441080 ITGA2P17301 1181 aa4.78□□□□□ -1.64
PFDN4-202ENST00000441080 BDNFP23560 247 aa4.78□□□□□ -1.64
PFDN4-202ENST00000441080 ACSL1P33121 698 aa4.78□□□□□ -1.64
PFDN4-202ENST00000441080 ISL1P61371 349 aa4.78□□□□□ -1.64
PFDN4-202ENST00000441080 MRPS5P82675 430 aaKnown RBP4.78□□□□□ -1.64
PFDN4-202ENST00000441080 CCDC96Q2M329 555 aa4.78□□□□□ -1.64
PFDN4-202ENST00000441080 SPSB3Q6PJ21 355 aa4.78□□□□□ -1.64
PFDN4-202ENST00000441080 TMEM219Q86XT9 240 aa4.78□□□□□ -1.64
PFDN4-202ENST00000441080 PM20D2Q8IYS1 436 aa4.78□□□□□ -1.64
PFDN4-202ENST00000441080 POC5Q8NA72 575 aa4.78□□□□□ -1.64
PFDN4-202ENST00000441080 SECTM1Q8WVN6 248 aa4.78□□□□□ -1.64
PFDN4-202ENST00000441080 JAKMIP2Q96AA8 810 aa4.78□□□□□ -1.64
PFDN4-202ENST00000441080 CSTL1Q9H114 145 aa4.78□□□□□ -1.64
PFDN4-202ENST00000441080 TMX4Q9H1E5 349 aaPredicted RBP4.78□□□□□ -1.64
PFDN4-202ENST00000441080 DNAJC18Q9H819 358 aa4.78□□□□□ -1.64
PFDN4-202ENST00000441080 EBF2Q9HAK2 575 aa4.78□□□□□ -1.64
PFDN4-202ENST00000441080 SEC63Q9UGP8 760 aaKnown RBP4.78□□□□□ -1.64
PFDN4-202ENST00000441080 EXO1Q9UQ84 846 aaKnown RBP4.78□□□□□ -1.64
PFDN4-202ENST00000441080 TMEM184BQ9Y519 407 aaPredicted RBP4.78□□□□□ -1.64
PFDN4-202ENST00000441080 CGNL1Q0VF96 1302 aa4.77□□□□□ -1.65
PFDN4-202ENST00000441080 A0A1W2PR77 199 aa4.77□□□□□ -1.65
PFDN4-202ENST00000441080 SMTNL1A8MU46 457 aa4.77□□□□□ -1.65
PFDN4-202ENST00000441080 CAMTA2O94983 1202 aa4.77□□□□□ -1.65
PFDN4-202ENST00000441080 TUBBP07437 444 aa4.77□□□□□ -1.65
PFDN4-202ENST00000441080 HLA-DOBP13765 273 aa4.77□□□□□ -1.65
PFDN4-202ENST00000441080 POLR2CP19387 275 aaPredicted RBP4.77□□□□□ -1.65
PFDN4-202ENST00000441080 IL15P40933 162 aaPredicted RBP4.77□□□□□ -1.65
PFDN4-202ENST00000441080 RRP1P56182 461 aaKnown RBP4.77□□□□□ -1.65
PFDN4-202ENST00000441080 COG7P83436 770 aa4.77□□□□□ -1.65
PFDN4-202ENST00000441080 EEF1A2Q05639 463 aaKnown RBP4.77□□□□□ -1.65
PFDN4-202ENST00000441080 SPOCK1Q08629 439 aa4.77□□□□□ -1.65
PFDN4-202ENST00000441080 ZNF234Q14588 700 aa4.77□□□□□ -1.65
PFDN4-202ENST00000441080 MVPQ14764 893 aaKnown RBP4.77□□□□□ -1.65
PFDN4-202ENST00000441080 TMEM35AQ53FP2 167 aa4.77□□□□□ -1.65
PFDN4-202ENST00000441080 IRAK1BP1Q5VVH5 260 aa4.77□□□□□ -1.65
PFDN4-202ENST00000441080 TUBA1AQ71U36 451 aa4.77□□□□□ -1.65
PFDN4-202ENST00000441080 KMT5CQ86Y97 462 aa4.77□□□□□ -1.65
PFDN4-202ENST00000441080 MCEMP1Q8IX19 187 aa4.77□□□□□ -1.65
PFDN4-202ENST00000441080 SLC38A9Q8NBW4 561 aa4.77□□□□□ -1.65
PFDN4-202ENST00000441080 BBS10Q8TAM1 723 aa4.77□□□□□ -1.65
PFDN4-202ENST00000441080 PPP4R1Q8TF05 950 aa4.77□□□□□ -1.65
PFDN4-202ENST00000441080 FEM1CQ96JP0 617 aa4.77□□□□□ -1.65
PFDN4-202ENST00000441080 FAM84BQ96KN1 310 aaPredicted RBP4.77□□□□□ -1.65
PFDN4-202ENST00000441080 TUBA1CQ9BQE3 449 aa4.77□□□□□ -1.65
PFDN4-202ENST00000441080 SYT17Q9BSW7 474 aa4.77□□□□□ -1.65
PFDN4-202ENST00000441080 RAD21L1Q9H4I0 556 aa4.77□□□□□ -1.65
PFDN4-202ENST00000441080 RETREG1Q9H6L5 497 aa4.77□□□□□ -1.65
PFDN4-202ENST00000441080 LRRC4Q9HBW1 653 aa4.77□□□□□ -1.65
PFDN4-202ENST00000441080 SWAP70Q9UH65 585 aa4.77□□□□□ -1.65
PFDN4-202ENST00000441080 OR2W1Q9Y3N9 320 aa4.77□□□□□ -1.65
PFDN4-202ENST00000441080 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.77□□□□□ -1.65
PFDN4-202ENST00000441080 A0A1W2PP11 408 aa4.76□□□□□ -1.65
PFDN4-202ENST00000441080 TMEM8BA6NDV4 472 aa4.76□□□□□ -1.65
PFDN4-202ENST00000441080 GH2P01242 217 aa4.76□□□□□ -1.65
PFDN4-202ENST00000441080 CDH1P12830 882 aa4.76□□□□□ -1.65
PFDN4-202ENST00000441080 MMP9P14780 707 aa4.76□□□□□ -1.65
PFDN4-202ENST00000441080 SAT1P21673 171 aa4.76□□□□□ -1.65
PFDN4-202ENST00000441080 KCNA5P22460 613 aa4.76□□□□□ -1.65
PFDN4-202ENST00000441080 HRH2P25021 359 aa4.76□□□□□ -1.65
PFDN4-202ENST00000441080 EIF2DP41214 584 aaKnown RBP4.76□□□□□ -1.65
PFDN4-202ENST00000441080 NRIP1P48552 1158 aa4.76□□□□□ -1.65
PFDN4-202ENST00000441080 AMPHP49418 695 aa4.76□□□□□ -1.65
PFDN4-202ENST00000441080 MMP14P50281 582 aa4.76□□□□□ -1.65
PFDN4-202ENST00000441080 STK4Q13043 487 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms