RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 SLC45A1Q9Y2W3 748 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 UTP11Q9Y3A2 253 aaKnown RBP3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 STYXL1Q9Y6J8 313 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 ATAD5Q96QE3 1844 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 ADGRA3Q8IWK6 1321 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 IGKV6D-21A0A0A0MT36 114 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 A6NCN8 305 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 ZSCAN5CA6NGD5 496 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 GOLGA6L10A6NI86 522 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 LRRIQ4A6NIV6 560 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 A8MVJ9 347 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 INSIG1O15503 277 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 TTI1O43156 1089 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 SPOPO43791 374 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 RPS6KA5O75582 802 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 PIAS2O75928 621 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 ERLIN2O94905 339 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 OAZ2O95190 189 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 SLC25A27O95847 323 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 TBX18O95935 607 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 PIGRP01833 764 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 HLA-DRAP01903 254 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 IVLP07476 585 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 ITGA2BP08514 1039 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 CBSLP0DN79 551 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 MYBL1P10243 752 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 DLATP10515 647 aaKnown RBP3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 KRT5P13647 590 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 TNNI1P19237 187 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 UBA1P22314 1058 aaKnown RBP3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 GLRA2P23416 452 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 ATP5F1P24539 256 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 FPR3P25089 353 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 CTNNA2P26232 953 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 MST1P26927 711 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 CHRNA3P32297 505 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 ELF1P32519 619 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 CBSP35520 551 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 COPB2P35606 906 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 PEX5P50542 639 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 CCR5P51681 352 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 PGDP52209 483 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 AP3M2P53677 418 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 PRKAA2P54646 552 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 DRG2P55039 364 aaKnown RBP3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 HNRNPH2P55795 449 aaKnown RBP3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 TIRAPP58753 221 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 PTENP60484 403 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 RPS13P62277 151 aaKnown RBP3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 IRX3P78415 501 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 TXNL4AP83876 142 aaKnown RBP3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 HSF1Q00613 529 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 TIAL1Q01085 375 aaKnown RBP eCLIP3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 DR1Q01658 176 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 POU5F1Q01860 360 aaKnown RBP3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 ID2Q02363 134 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 TLE2Q04725 743 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 VGLL4Q14135 290 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 DHX34Q14147 1143 aaKnown RBP3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 SLC29A2Q14542 456 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 MESDQ14696 234 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 TOMM20Q15388 145 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 TRADDQ15628 312 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 ZSCAN26Q16670 478 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 SLC5A9Q2M3M2 681 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 ZIK1Q3SY52 487 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 RNASE12Q5GAN4 147 aaKnown RBP3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 SPDYCQ5MJ68 293 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 SEL1L2Q5TEA6 688 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 LIN9Q5TKA1 542 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 PPP1R2P3Q6NXS1 205 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 LRIG3Q6UXM1 1119 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 ERO1BQ86YB8 467 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 GATAD2AQ86YP4 633 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 CCDC28AQ8IWP9 274 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 EFCAB13Q8IY85 973 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 CCDC89Q8N998 374 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 C16orf52Q8NHV5 167 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 ZNF564Q8TBZ8 553 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 TCP11Q8WWU5 503 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 SEPT1Q8WYJ6 367 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 HTRA1Q92743 480 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 TMEM143Q96AN5 459 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 ZNF653Q96CK0 615 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 ERP27Q96DN0 273 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 ZBTB10Q96DT7 871 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 PKNOX2Q96KN3 472 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 RUNDC3BQ96NL0 473 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 SERINC2Q96SA4 455 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 PCYT2Q99447 389 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 PRPF18Q99633 342 aaKnown RBP3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 ERP44Q9BS26 406 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 MSTO1Q9BUK6 570 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 EFHD1Q9BUP0 239 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 NUP85Q9BW27 656 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 CINPQ9BW66 212 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 SPATC1LQ9H0A9 340 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 PCDHAC1Q9H158 963 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 DPH5Q9H2P9 285 aa3.54□□□□□ -1.84
HMGB3P11-201ENST00000440127 DHX33Q9H6R0 707 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms