RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 TROVE2P10155 538 aaKnown RBP eCLIP14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 SAT1P21673 171 aa14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 ARNTP27540 789 aa14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 SERPINA4P29622 427 aa14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 TMPRSS15P98073 1019 aa14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 CTBP1Q13363 440 aa14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 SF3A2Q15428 464 aaKnown RBP14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 TAF1AQ15573 450 aaPredicted RBP14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 CCDC153Q494R4 210 aa14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 ARMC12Q5T9G4 340 aa14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 N4BP2L1Q5TBK1 243 aaPredicted RBP14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 ATG16L1Q676U5 607 aa14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 SEL1L3Q68CR1 1132 aa14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 LAYNQ6UX15 382 aa14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 CDHR3Q6ZTQ4 885 aa14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 PIGWQ7Z7B1 504 aa14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 DENND6AQ8IWF6 608 aa14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 GPATCH11Q8N954 259 aa14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 OR13J1Q8NGT2 312 aa14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 RAB3IL1Q8TBN0 382 aa14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 SREK1Q8WXA9 508 aaKnown RBP14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 FOXJ1Q92949 421 aa14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 HDAC10Q969S8 669 aa14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 DNAJC1Q96KC8 554 aaKnown RBP14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 SMIM14Q96QK8 99 aa14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 TUBGCP5Q96RT8 1024 aa14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 HACD3Q9P035 362 aa14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 PILRBQ9UKJ0 227 aa14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 PHTF1Q9UMS5 762 aa14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 FADS3Q9Y5Q0 445 aa14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 KNL1Q8NG31 2342 aa14.47□□□□□ -0.09
TNFRSF1A-204ENST00000440083 TRAFD1O14545 582 aaPredicted RBP14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 WNT9AO14904 365 aa14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 BIRC5O15392 142 aa14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 SNX3O60493 162 aa14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 EDF1O60869 148 aaKnown RBP14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 F7P08709 466 aaPredicted RBP14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 PIRTP0C851 137 aa14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 BGNP21810 368 aa14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 TGM1P22735 817 aa14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 PI4KAP42356 2102 aa14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 GRIA4P48058 902 aa14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 KPNA2P52292 529 aaKnown RBP14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 BCL2L1Q07817 233 aa14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 MSLNQ13421 630 aaPredicted RBP14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 PTPRRQ15256 657 aa14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 PLA2G2CQ5R387 149 aa14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 MRNIPQ6NTE8 343 aa14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 AFTPHQ6ULP2 937 aa14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 CCDC91Q7Z6B0 441 aa14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 PTAR1Q7Z6K3 402 aaPredicted RBP14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 TTC7BQ86TV6 843 aa14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 NUDCD3Q8IVD9 361 aa14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 TSPAN17Q96FV3 270 aa14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 ZNF641Q96N77 438 aaPredicted RBP14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 SLC6A18Q96N87 628 aa14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 MYOCQ99972 504 aa14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 TSSK1BQ9BXA7 367 aa14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 CAB39LQ9H9S4 337 aa14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 PCDH12Q9NPG4 1184 aa14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 FBXO6Q9NRD1 293 aaPredicted RBP14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 CATSPERZQ9NTU4 200 aa14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 DKK3Q9UBP4 350 aa14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 ZFR2Q9UPR6 939 aaKnown RBP14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 CA5BQ9Y2D0 317 aa14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 PCDHGA5Q9Y5G8 931 aa14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 ARL5AQ9Y689 179 aa14.46□□□□□ -0.09
TNFRSF1A-204ENST00000440083 UPK3BL1B0FP48 263 aa14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 UPK3BL2E5RIL1 263 aa14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 AREL1O15033 823 aa14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 PLIN3O60664 434 aa14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 PCDH8O95206 1070 aa14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 GOT2P00505 430 aaKnown RBP14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 AHSGP02765 367 aa14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 APOA4P06727 396 aa14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 BPGMP07738 259 aa14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 STMN1P16949 149 aa14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 OGNP20774 298 aaKnown RBP14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 CRABP2P29373 138 aa14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 ZNF140P52738 457 aaPredicted RBP14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 IRX4P78413 519 aa14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 ACVR1Q04771 509 aa14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 SF3A3Q12874 501 aaKnown RBP eCLIP14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 CACNA1EQ15878 2313 aa14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 WDR45BQ5MNZ6 344 aa14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 RNF187Q5TA31 235 aaPredicted RBP14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 PEAR1Q5VY43 1037 aaPredicted RBP14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 CCDC121Q6ZUS5 278 aa14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 GALNT7Q86SF2 657 aa14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 SDCCAG8Q86SQ7 713 aaPredicted RBP14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 LCA5Q86VQ0 697 aa14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 SYT12Q8IV01 421 aa14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 DNASE2BQ8WZ79 361 aa14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 ECHDC3Q96DC8 303 aa14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 MCMBPQ9BTE3 642 aa14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 WRAP53Q9BUR4 548 aaKnown RBP14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 PCED1AQ9H1Q7 454 aa14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 PREBQ9HCU5 417 aa14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 FZD3Q9NPG1 666 aa14.45□□□□□ -0.1
TNFRSF1A-204ENST00000440083 SEMA4GQ9NTN9 838 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms