RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 ISXQ2M1V0 245 aa23.36■■□□□ 1.33
VARS-217ENST00000440048 CCNJLQ8IV13 435 aa23.36■■□□□ 1.33
VARS-217ENST00000440048 Q8N9G6 341 aaPredicted RBP23.36■■□□□ 1.33
VARS-217ENST00000440048 ANP32BQ92688 251 aaKnown RBP23.36■■□□□ 1.33
VARS-217ENST00000440048 NXPE2Q96DL1 559 aa23.36■■□□□ 1.33
VARS-217ENST00000440048 UGT1A7Q9HAW7 530 aa23.36■■□□□ 1.33
VARS-217ENST00000440048 UGT1A10Q9HAW8 530 aa23.36■■□□□ 1.33
VARS-217ENST00000440048 UGT1A8Q9HAW9 530 aa23.36■■□□□ 1.33
VARS-217ENST00000440048 KIF26BQ2KJY2 2108 aa23.36■■□□□ 1.33
VARS-217ENST00000440048 A0A1W2PQM1 296 aa23.35■■□□□ 1.33
VARS-217ENST00000440048 TAF4O00268 1085 aa23.35■■□□□ 1.33
VARS-217ENST00000440048 CRTAMO95727 393 aa23.35■■□□□ 1.33
VARS-217ENST00000440048 EML2O95834 649 aa23.35■■□□□ 1.33
VARS-217ENST00000440048 RPLP0P05388 317 aaKnown RBP23.35■■□□□ 1.33
VARS-217ENST00000440048 ETS1P14921 441 aa23.35■■□□□ 1.33
VARS-217ENST00000440048 RTP5Q14D33 572 aa23.35■■□□□ 1.33
VARS-217ENST00000440048 CRTC3Q6UUV7 619 aa23.35■■□□□ 1.33
VARS-217ENST00000440048 PRUNE1Q86TP1 453 aa23.35■■□□□ 1.33
VARS-217ENST00000440048 GDAP1Q8TB36 358 aa23.35■■□□□ 1.33
VARS-217ENST00000440048 MAIP1Q8WWC4 291 aa23.35■■□□□ 1.33
VARS-217ENST00000440048 LRRN3Q9H3W5 708 aa23.35■■□□□ 1.33
VARS-217ENST00000440048 TBC1D29Q9UFV1 150 aa23.35■■□□□ 1.33
VARS-217ENST00000440048 FKBPLQ9UIM3 349 aa23.35■■□□□ 1.33
VARS-217ENST00000440048 ZKSCAN5Q9Y2L8 839 aa23.35■■□□□ 1.33
VARS-217ENST00000440048 ZSCAN12O43309 604 aa23.34■■□□□ 1.33
VARS-217ENST00000440048 CDK14O94921 469 aa23.34■■□□□ 1.33
VARS-217ENST00000440048 TPH1P17752 444 aa23.34■■□□□ 1.33
VARS-217ENST00000440048 ZNF140P52738 457 aaPredicted RBP23.34■■□□□ 1.33
VARS-217ENST00000440048 PDE1BQ01064 536 aa23.34■■□□□ 1.33
VARS-217ENST00000440048 TMEM115Q12893 351 aaPredicted RBP23.34■■□□□ 1.33
VARS-217ENST00000440048 ITGA9Q13797 1035 aa23.34■■□□□ 1.33
VARS-217ENST00000440048 LONRF2Q1L5Z9 754 aa23.34■■□□□ 1.33
VARS-217ENST00000440048 DRICH1Q6PGQ1 229 aaPredicted RBP23.34■■□□□ 1.33
VARS-217ENST00000440048 ZNF438Q7Z4V0 828 aa23.34■■□□□ 1.33
VARS-217ENST00000440048 SPRED1Q7Z699 444 aa23.34■■□□□ 1.33
VARS-217ENST00000440048 LRRTM4Q86VH4 590 aa23.34■■□□□ 1.33
VARS-217ENST00000440048 OR13C4Q8NGS5 318 aa23.34■■□□□ 1.33
VARS-217ENST00000440048 ZNF398Q8TD17 642 aa23.34■■□□□ 1.33
VARS-217ENST00000440048 PDLIM2Q96JY6 352 aa23.34■■□□□ 1.33
VARS-217ENST00000440048 GFM1Q96RP9 751 aaKnown RBP23.34■■□□□ 1.33
VARS-217ENST00000440048 ETNK1Q9HBU6 452 aa23.34■■□□□ 1.33
VARS-217ENST00000440048 SLC23A2Q9UGH3 650 aa23.34■■□□□ 1.33
VARS-217ENST00000440048 JRKLQ9Y4A0 524 aa23.34■■□□□ 1.33
VARS-217ENST00000440048 ENTPD2Q9Y5L3 495 aa23.34■■□□□ 1.33
VARS-217ENST00000440048 AK5Q9Y6K8 562 aa23.34■■□□□ 1.33
VARS-217ENST00000440048 TRBV23OR9-2A0A075B6M9 112 aa23.33■■□□□ 1.33
VARS-217ENST00000440048 RHPN2P1A8MT19 583 aa23.33■■□□□ 1.33
VARS-217ENST00000440048 KMOO15229 486 aa23.33■■□□□ 1.33
VARS-217ENST00000440048 LDB2O43679 373 aa23.33■■□□□ 1.33
VARS-217ENST00000440048 PRAMEF1O95521 474 aa23.33■■□□□ 1.33
VARS-217ENST00000440048 ACTN2P35609 894 aa23.33■■□□□ 1.33
VARS-217ENST00000440048 FDFT1P37268 417 aa23.33■■□□□ 1.33
VARS-217ENST00000440048 PDX1P52945 283 aa23.33■■□□□ 1.33
VARS-217ENST00000440048 B4GALNT1Q00973 533 aa23.33■■□□□ 1.33
VARS-217ENST00000440048 LDLRAP1Q5SW96 308 aa23.33■■□□□ 1.33
VARS-217ENST00000440048 ZNF547Q8IVP9 402 aa23.33■■□□□ 1.33
VARS-217ENST00000440048 CCDC89Q8N998 374 aa23.33■■□□□ 1.33
VARS-217ENST00000440048 GLIS1Q8NBF1 620 aa23.33■■□□□ 1.33
VARS-217ENST00000440048 KLC4Q9NSK0 619 aa23.33■■□□□ 1.33
VARS-217ENST00000440048 SMOXQ9NWM0 555 aa23.33■■□□□ 1.33
VARS-217ENST00000440048 PIH1D1Q9NWS0 290 aaKnown RBP23.33■■□□□ 1.33
VARS-217ENST00000440048 DRG1Q9Y295 367 aaKnown RBP23.33■■□□□ 1.33
VARS-217ENST00000440048 ERI2A8K979 691 aaKnown RBP23.32■■□□□ 1.32
VARS-217ENST00000440048 D6RAR5 112 aa23.32■■□□□ 1.32
VARS-217ENST00000440048 PPM1DO15297 605 aa23.32■■□□□ 1.32
VARS-217ENST00000440048 SNX2O60749 519 aa23.32■■□□□ 1.32
VARS-217ENST00000440048 ZNF7P17097 686 aaPredicted RBP23.32■■□□□ 1.32
VARS-217ENST00000440048 CLCNKAP51800 687 aa23.32■■□□□ 1.32
VARS-217ENST00000440048 TMPRSS15P98073 1019 aa23.32■■□□□ 1.32
VARS-217ENST00000440048 XIAPP98170 497 aa23.32■■□□□ 1.32
VARS-217ENST00000440048 BIRC2Q13490 618 aa23.32■■□□□ 1.32
VARS-217ENST00000440048 GTF2H3Q13889 308 aa23.32■■□□□ 1.32
VARS-217ENST00000440048 NR1D2Q14995 579 aa23.32■■□□□ 1.32
VARS-217ENST00000440048 PLA2G4EQ3MJ16 856 aa23.32■■□□□ 1.32
VARS-217ENST00000440048 GPRC6AQ5T6X5 926 aa23.32■■□□□ 1.32
VARS-217ENST00000440048 DDHD1Q8NEL9 900 aa23.32■■□□□ 1.32
VARS-217ENST00000440048 SLC37A2Q8TED4 501 aa23.32■■□□□ 1.32
VARS-217ENST00000440048 GRAMD1AQ96CP6 724 aa23.32■■□□□ 1.32
VARS-217ENST00000440048 ATXN7L3BQ96GX2 97 aa23.32■■□□□ 1.32
VARS-217ENST00000440048 C19orf43Q9BQ61 176 aa23.32■■□□□ 1.32
VARS-217ENST00000440048 TRMT1Q9NXH9 659 aaKnown RBP23.32■■□□□ 1.32
VARS-217ENST00000440048 ITPR1Q14643 2758 aa23.32■■□□□ 1.32
VARS-217ENST00000440048 LAMA5O15230 3695 aa23.31■■□□□ 1.32
VARS-217ENST00000440048 A6NCN8 305 aa23.31■■□□□ 1.32
VARS-217ENST00000440048 B4GAT1O43505 415 aa23.31■■□□□ 1.32
VARS-217ENST00000440048 SRP72O76094 671 aaKnown RBP23.31■■□□□ 1.32
VARS-217ENST00000440048 ZSCAN5DPP0CG00 497 aa23.31■■□□□ 1.32
VARS-217ENST00000440048 OR1D5P58170 312 aa23.31■■□□□ 1.32
VARS-217ENST00000440048 INSCQ1MX18 579 aa23.31■■□□□ 1.32
VARS-217ENST00000440048 IYDQ6PHW0 289 aa23.31■■□□□ 1.32
VARS-217ENST00000440048 LINC00523Q86TU6 105 aa23.31■■□□□ 1.32
VARS-217ENST00000440048 SLC35F6Q8N357 371 aa23.31■■□□□ 1.32
VARS-217ENST00000440048 SFRP1Q8N474 314 aa23.31■■□□□ 1.32
VARS-217ENST00000440048 TTC25Q96NG3 672 aa23.31■■□□□ 1.32
VARS-217ENST00000440048 TIMM29Q9BSF4 260 aa23.31■■□□□ 1.32
VARS-217ENST00000440048 ZCCHC2Q9C0B9 1178 aaKnown RBP23.31■■□□□ 1.32
VARS-217ENST00000440048 ASB8Q9H765 288 aa23.31■■□□□ 1.32
VARS-217ENST00000440048 RAB6BQ9NRW1 208 aa23.31■■□□□ 1.32
VARS-217ENST00000440048 PAK5Q9P286 719 aa23.31■■□□□ 1.32
VARS-217ENST00000440048 ATXN7L1Q9ULK2 861 aaPredicted RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms