RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 GNA12Q03113 381 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 GALNT7Q86SF2 657 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 LINGO1Q96FE5 620 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 BIRC8Q96P09 236 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 SYTL2Q9HCH5 934 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 ACTR3BQ9P1U1 418 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 MIA3Q5JRA6 1907 aa13.44□□□□□ -0.26
HERPUD1-204ENST00000439977 A0A1W2PP18 115 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 SNX2O60749 519 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 ADAMTS4O75173 837 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 GJB5O95377 273 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 C1RP00736 705 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 PENKP01210 267 aaPredicted RBP13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 IRF1P10914 325 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 MC4RP32245 332 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 DGKQP52824 942 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 MTPNP58546 118 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 IRF5Q13568 498 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 NANOGP8Q6NSW7 305 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 RNF145Q96MT1 663 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 TRIB3Q96RU7 358 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 ZIC5Q96T25 663 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 RPF2Q9H7B2 306 aaKnown RBP13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 NANOGQ9H9S0 305 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 GIPC1O14908 333 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 CLOCKO15516 846 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 B4GAT1O43505 415 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 SYNCRIPO60506 623 aaKnown RBP13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 SLC22A3O75751 556 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 SNAP29O95721 258 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 PRLP01236 227 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 RPL17P18621 184 aaKnown RBP13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 HTR6P50406 440 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 SUOXP51687 545 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 ZNF140P52738 457 aaPredicted RBP13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 DSC1Q08554 894 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 TMEM259Q4ZIN3 620 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 MFSD14CQ5VZR4 134 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 TBPL2Q6SJ96 375 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 IFNL1Q8IU54 200 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 GPR150Q8NGU9 434 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 ZUFSPQ96AP4 578 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 DUS3LQ96G46 650 aaKnown RBP13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 FUBP3Q96I24 572 aaKnown RBP eCLIP13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 MYRFLQ96LU7 910 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 ZNF599Q96NL3 588 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 PDFQ9HBH1 243 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 RHBDL2Q9NX52 303 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 GALNT8Q9NY28 637 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 FNIP2Q9P278 1114 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 ZMYM5Q9UJ78 669 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 LCHNA4D1U4 455 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 AQP12BA6NM10 295 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 MAGEB3O15480 346 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 GUCA1CO95843 209 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 CNPP09543 421 aaKnown RBP13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 HSD17B1P14061 328 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 CCT8P50990 548 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 POLR2JP52435 117 aaKnown RBP13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 OR4D2P58180 307 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 HPCAP84074 193 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 TMEM214Q6NUQ4 689 aaKnown RBP13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 PRSS55Q6UWB4 352 aaPredicted RBP13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 RASAL3Q86YV0 1011 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 AQP12AQ8IXF9 295 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 TRPV3Q8NET8 790 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 RNF217Q8TC41 542 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 GAB3Q8WWW8 586 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 PLEKHG4BQ96PX9 1271 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 ASB2Q96Q27 587 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 DERL2Q9GZP9 239 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 NLE1Q9NVX2 485 aaPredicted RBP13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 UBA2Q9UBT2 640 aaPredicted RBP13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 PCTPQ9UKL6 214 aa13.43□□□□□ -0.26
HERPUD1-204ENST00000439977 E5RI56 91 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 H0YJX3 145 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 ACOX3O15254 700 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 PRAMEF12O95522 483 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 IGHA2P01877 340 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 ZFP36L2P47974 494 aaKnown RBP13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 ALDH3B2P48448 385 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 PPP1R8Q12972 351 aaKnown RBP13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 SELPLGQ14242 412 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 TYSND1Q2T9J0 566 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 LCN8Q6JVE9 175 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 LETMD1Q6P1Q0 360 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 SLC24A5Q71RS6 500 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 TAS1R1Q7RTX1 841 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 TMEM173Q86WV6 379 aaPredicted RBP13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 GPSM1Q86YR5 675 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 OR6K2Q8NGY2 324 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 FAM81AQ8TBF8 368 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 ABTB1Q969K4 478 aaPredicted RBP13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 CENPNQ96H22 339 aaPredicted RBP13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 TRIM15Q9C019 465 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 LTB4R2Q9NPC1 389 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 TRMT6Q9UJA5 497 aaKnown RBP13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 SLC8A2Q9UPR5 921 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 MTMR11A4FU01 709 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 C2orf81A6NN90 581 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms