RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 HS6ST1O60243 411 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 SEC22BO75396 215 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 OR6B1O95007 311 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 CPSF4O95639 269 aaKnown RBP6.34□□□□□ -1.39
BDNF-211ENST00000439476 TOP3BO95985 862 aaKnown RBP6.34□□□□□ -1.39
BDNF-211ENST00000439476 GNRH1P01148 92 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 NCF1P14598 390 aaPredicted RBP6.34□□□□□ -1.39
BDNF-211ENST00000439476 ARL2P36404 184 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 TGFBR2P37173 567 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 GRIA1P42261 906 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 SLC16A1P53985 500 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 RAB10P61026 200 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 SLC25A11Q02978 314 aaKnown RBP6.34□□□□□ -1.39
BDNF-211ENST00000439476 CXCL9Q07325 125 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 EFEMP1Q12805 493 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 STX4Q12846 297 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 CTBP1Q13363 440 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 ZNF423Q2M1K9 1284 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 SLC9B1Q4ZJI4 515 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 CERCAMQ5T4B2 595 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 STXBP5Q5T5C0 1151 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 ZNF618Q5T7W0 954 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 IQSEC1Q6DN90 963 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 KIAA0408Q6ZU52 694 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 R3HCC1LQ7Z5L2 792 aaKnown RBP6.34□□□□□ -1.39
BDNF-211ENST00000439476 NECAB2Q7Z6G3 386 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 UNC5BQ8IZJ1 945 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 PHTF2Q8N3S3 785 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 CNTD1Q8N815 330 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 SVIPQ8NHG7 77 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 LILRB4Q8NHJ6 448 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 PNPT1Q8TCS8 783 aaKnown RBP6.34□□□□□ -1.39
BDNF-211ENST00000439476 NRG4Q8WWG1 115 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 HPS1Q92902 700 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 BORCS5Q969J3 196 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 ACAT2Q9BWD1 397 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 GHITMQ9H3K2 345 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 CATSPERZQ9NTU4 200 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 ZSCAN32Q9NX65 697 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 AKAP7Q9P0M2 348 aaPredicted RBP6.34□□□□□ -1.39
BDNF-211ENST00000439476 EGFL7Q9UHF1 273 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 GNPTGQ9UJJ9 305 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 ZNF541Q9H0D2 1346 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 E7ESA3 106 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 PTGES3LE9PB15 166 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 CCNT2O60583 730 aaKnown RBP6.34□□□□□ -1.39
BDNF-211ENST00000439476 DNAJB5O75953 348 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 CKMP06732 381 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 GSTM1P09488 218 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 TSPAN19P0C672 248 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 PABPC4LP0CB38 370 aaKnown RBP6.34□□□□□ -1.39
BDNF-211ENST00000439476 UMPSP11172 480 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 NPR3P17342 541 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 ERCC2P18074 760 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 XRCC1P18887 633 aaPredicted RBP6.34□□□□□ -1.39
BDNF-211ENST00000439476 TSPAN8P19075 237 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 POU1F1P28069 291 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 PBLDP30039 288 aaPredicted RBP6.34□□□□□ -1.39
BDNF-211ENST00000439476 LIMK2P53671 638 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 CDK18Q07002 472 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 FSTL1Q12841 308 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 ZIK1Q3SY52 487 aaPredicted RBP6.34□□□□□ -1.39
BDNF-211ENST00000439476 BRMS1LQ5PSV4 323 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 ARMC12Q5T9G4 340 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 ZDHHC20Q5W0Z9 365 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 EGFLAMQ63HQ2 1017 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 TYW3Q6IPR3 259 aaKnown RBP6.34□□□□□ -1.39
BDNF-211ENST00000439476 FSTL4Q6MZW2 842 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 DPY19L2P1Q6NXN4 242 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 USP43Q70EL4 1123 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 EPHX4Q8IUS5 362 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 LSMEM2Q8N112 164 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 UTP15Q8TED0 518 aaKnown RBP6.34□□□□□ -1.39
BDNF-211ENST00000439476 LRTOMTQ8WZ04 291 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 QKIQ96PU8 341 aaKnown RBP eCLIP6.34□□□□□ -1.39
BDNF-211ENST00000439476 TINF2Q9BSI4 451 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.34□□□□□ -1.39
BDNF-211ENST00000439476 PIGUQ9H490 435 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 ATP13A1Q9HD20 1204 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 PNPLA8Q9NP80 782 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 ANGPT4Q9Y264 503 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 FUOMA2VDF0 154 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 FAM159BA6NKW6 160 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 MDM4O15151 490 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 NRP2O60462 931 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 OTCP00480 354 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 SERPINA4P29622 427 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 PSMD4P55036 377 aaKnown RBP6.33□□□□□ -1.4
BDNF-211ENST00000439476 JAG1P78504 1218 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 MAPK11Q15759 364 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 GRIK4Q16099 956 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 FSCN1Q16658 493 aaKnown RBP6.33□□□□□ -1.4
BDNF-211ENST00000439476 TIGD2Q4W5G0 525 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 RFTN2Q52LD8 501 aaPredicted RBP6.33□□□□□ -1.4
BDNF-211ENST00000439476 ALFQ53S48 1182 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 FAM26DQ5JW98 314 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 ERICH5Q6P6B1 374 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 STRADAQ7RTN6 431 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 PLPPR4Q7Z2D5 763 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 PAGE2Q7Z2X7 111 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms