RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 AP2A1O95782 977 aa24.42■■□□□ 1.5
RAPGEF1-206ENST00000438647 IFNB1P01574 187 aa24.42■■□□□ 1.5
RAPGEF1-206ENST00000438647 FASLGP48023 281 aa24.42■■□□□ 1.5
RAPGEF1-206ENST00000438647 LSSP48449 732 aa24.42■■□□□ 1.5
RAPGEF1-206ENST00000438647 CLCNKAP51800 687 aa24.42■■□□□ 1.5
RAPGEF1-206ENST00000438647 GABREP78334 506 aa24.42■■□□□ 1.5
RAPGEF1-206ENST00000438647 TMEM115Q12893 351 aaPredicted RBP24.42■■□□□ 1.5
RAPGEF1-206ENST00000438647 SPARCL1Q14515 664 aa24.42■■□□□ 1.5
RAPGEF1-206ENST00000438647 INSCQ1MX18 579 aa24.42■■□□□ 1.5
RAPGEF1-206ENST00000438647 DENND5AQ6IQ26 1287 aa24.42■■□□□ 1.5
RAPGEF1-206ENST00000438647 SFRP1Q8N474 314 aa24.42■■□□□ 1.5
RAPGEF1-206ENST00000438647 C1orf54Q8WWF1 131 aa24.42■■□□□ 1.5
RAPGEF1-206ENST00000438647 TIMM29Q9BSF4 260 aa24.42■■□□□ 1.5
RAPGEF1-206ENST00000438647 TLR10Q9BXR5 811 aa24.42■■□□□ 1.5
RAPGEF1-206ENST00000438647 STRADBQ9C0K7 418 aa24.42■■□□□ 1.5
RAPGEF1-206ENST00000438647 SMOXQ9NWM0 555 aa24.42■■□□□ 1.5
RAPGEF1-206ENST00000438647 TMPRSS11EQ9UL52 423 aa24.42■■□□□ 1.5
RAPGEF1-206ENST00000438647 RAXQ9Y2V3 346 aa24.42■■□□□ 1.5
RAPGEF1-206ENST00000438647 ZFC3H1O60293 1989 aaKnown RBP24.42■■□□□ 1.5
RAPGEF1-206ENST00000438647 ANKRD11Q6UB99 2663 aaPredicted RBP24.41■■□□□ 1.5
RAPGEF1-206ENST00000438647 ZZEF1O43149 2961 aa24.41■■□□□ 1.5
RAPGEF1-206ENST00000438647 OR5K4A6NMS3 321 aa24.41■■□□□ 1.5
RAPGEF1-206ENST00000438647 ERI2A8K979 691 aaKnown RBP24.41■■□□□ 1.5
RAPGEF1-206ENST00000438647 PRAMEF1O95521 474 aa24.41■■□□□ 1.5
RAPGEF1-206ENST00000438647 MPOP05164 745 aa24.41■■□□□ 1.5
RAPGEF1-206ENST00000438647 HADHAP40939 763 aa24.41■■□□□ 1.5
RAPGEF1-206ENST00000438647 CCNG2Q16589 344 aa24.41■■□□□ 1.5
RAPGEF1-206ENST00000438647 CLPPQ16740 277 aaPredicted RBP24.41■■□□□ 1.5
RAPGEF1-206ENST00000438647 CRTC3Q6UUV7 619 aa24.41■■□□□ 1.5
RAPGEF1-206ENST00000438647 LINC00523Q86TU6 105 aa24.41■■□□□ 1.5
RAPGEF1-206ENST00000438647 AVL9Q8NBF6 648 aa24.41■■□□□ 1.5
RAPGEF1-206ENST00000438647 DDHD1Q8NEL9 900 aa24.41■■□□□ 1.5
RAPGEF1-206ENST00000438647 KLC4Q9NSK0 619 aa24.41■■□□□ 1.5
RAPGEF1-206ENST00000438647 TBC1D29Q9UFV1 150 aa24.41■■□□□ 1.5
RAPGEF1-206ENST00000438647 CCDC187A0A096LP49 1063 aa24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 CASC3O15234 703 aaKnown RBP24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 UGT1A9O60656 530 aa24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 DXOO77932 396 aaKnown RBP24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 F3P13726 295 aa24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 VCLP18206 1134 aa24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 UGT1A6P19224 532 aa24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 UGT1A1P22309 533 aa24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 UGT1A4P22310 534 aa24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 ALDH4A1P30038 563 aa24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 UGT1A3P35503 534 aa24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 UGT1A5P35504 534 aa24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 FDFT1P37268 417 aa24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 PDX1P52945 283 aa24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 INHBCP55103 352 aa24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 B4GALNT1Q00973 533 aa24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 EIF3IQ13347 325 aaKnown RBP24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 MSLNQ13421 630 aaPredicted RBP24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 C3orf38Q5JPI3 329 aa24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 TRAPPC5Q8IUR0 188 aa24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 CCDC89Q8N998 374 aa24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 WDR36Q8NI36 951 aaKnown RBP24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 ZNF398Q8TD17 642 aa24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 SLC37A2Q8TED4 501 aa24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 LIN37Q96GY3 246 aaPredicted RBP24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 OSGEPL1Q9H4B0 414 aa24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 UGT1A7Q9HAW7 530 aa24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 UGT1A10Q9HAW8 530 aa24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 UGT1A8Q9HAW9 530 aa24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 SATB2Q9UPW6 733 aa24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 PCDHGA8Q9Y5G5 932 aa24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 COL27A1Q8IZC6 1860 aaPredicted RBP24.4■■□□□ 1.5
RAPGEF1-206ENST00000438647 KIR2DS5A0A0G2JLQ3 304 aa24.39■■□□□ 1.49
RAPGEF1-206ENST00000438647 A0A0G2JNG1 304 aa24.39■■□□□ 1.49
RAPGEF1-206ENST00000438647 KIR2DS3K7RE56 304 aa24.39■■□□□ 1.49
RAPGEF1-206ENST00000438647 GAPDHSO14556 408 aaPredicted RBP24.39■■□□□ 1.49
RAPGEF1-206ENST00000438647 SNX2O60749 519 aa24.39■■□□□ 1.49
RAPGEF1-206ENST00000438647 CPNE6O95741 557 aa24.39■■□□□ 1.49
RAPGEF1-206ENST00000438647 FGGP02679 453 aa24.39■■□□□ 1.49
RAPGEF1-206ENST00000438647 ZNF7P17097 686 aaPredicted RBP24.39■■□□□ 1.49
RAPGEF1-206ENST00000438647 CCKBRP32239 447 aa24.39■■□□□ 1.49
RAPGEF1-206ENST00000438647 SNX1Q13596 522 aa24.39■■□□□ 1.49
RAPGEF1-206ENST00000438647 PTPRCAPQ14761 206 aa24.39■■□□□ 1.49
RAPGEF1-206ENST00000438647 KIR2DS5Q14953 304 aa24.39■■□□□ 1.49
RAPGEF1-206ENST00000438647 TBC1D25Q3MII6 688 aa24.39■■□□□ 1.49
RAPGEF1-206ENST00000438647 MAP9Q49MG5 647 aa24.39■■□□□ 1.49
RAPGEF1-206ENST00000438647 KHDC1Q4VXA5 237 aaKnown RBP24.39■■□□□ 1.49
RAPGEF1-206ENST00000438647 GPRC6AQ5T6X5 926 aa24.39■■□□□ 1.49
RAPGEF1-206ENST00000438647 DRICH1Q6PGQ1 229 aaPredicted RBP24.39■■□□□ 1.49
RAPGEF1-206ENST00000438647 IYDQ6PHW0 289 aa24.39■■□□□ 1.49
RAPGEF1-206ENST00000438647 IGF2-ASQ6U949 168 aa24.39■■□□□ 1.49
RAPGEF1-206ENST00000438647 SLC9B2Q86UD5 537 aa24.39■■□□□ 1.49
RAPGEF1-206ENST00000438647 FGF11Q92914 225 aa24.39■■□□□ 1.49
RAPGEF1-206ENST00000438647 SH3KBP1Q96B97 665 aa24.39■■□□□ 1.49
RAPGEF1-206ENST00000438647 ZNF578Q96N58 590 aaPredicted RBP24.39■■□□□ 1.49
RAPGEF1-206ENST00000438647 UNC13CQ8NB66 2214 aa24.39■■□□□ 1.49
RAPGEF1-206ENST00000438647 LAMA5O15230 3695 aa24.38■■□□□ 1.49
RAPGEF1-206ENST00000438647 A6NCN8 305 aa24.38■■□□□ 1.49
RAPGEF1-206ENST00000438647 PPM1DO15297 605 aa24.38■■□□□ 1.49
RAPGEF1-206ENST00000438647 ZSCAN12O43309 604 aa24.38■■□□□ 1.49
RAPGEF1-206ENST00000438647 B4GAT1O43505 415 aa24.38■■□□□ 1.49
RAPGEF1-206ENST00000438647 KCNJ13O60928 360 aa24.38■■□□□ 1.49
RAPGEF1-206ENST00000438647 SRP72O76094 671 aaKnown RBP24.38■■□□□ 1.49
RAPGEF1-206ENST00000438647 ZNF140P52738 457 aaPredicted RBP24.38■■□□□ 1.49
RAPGEF1-206ENST00000438647 OR1D5P58170 312 aa24.38■■□□□ 1.49
RAPGEF1-206ENST00000438647 GPLD1P80108 840 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms