RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 IGSF11Q5DX21 431 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 CFAP157Q5JU67 520 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 SH2D4BQ5SQS7 431 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 ARHGAP40Q5TG30 622 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 LIN9Q5TKA1 542 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 MANEALQ5VSG8 457 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 PRAMEF20Q5VT98 475 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 FAM180AQ6UWF9 173 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 ABHD15Q6UXT9 468 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 KCTD20Q7Z5Y7 419 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 TMCO2Q7Z6W1 182 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 CUZD1Q86UP6 607 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 IQCHQ86VS3 1027 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 XYLT1Q86Y38 959 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 ZNF573Q86YE8 665 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 UNC5BQ8IZJ1 945 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 CLYBLQ8N0X4 340 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 SLC43A2Q8N370 569 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 SLC44A3Q8N4M1 653 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 PLD5Q8N7P1 536 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 ENDOVQ8N8Q3 282 aaKnown RBP3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 CPEB3Q8NE35 698 aaKnown RBP3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 STEAP2Q8NFT2 490 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 CADM4Q8NFZ8 388 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 OR52N2Q8NGI0 321 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 CAGE1Q8TC20 777 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 SLC2A12Q8TD20 617 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 ELP5Q8TE02 316 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 SNX33Q8WV41 574 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 SMARCE1Q969G3 411 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 FBXO32Q969P5 355 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 AZIN2Q96A70 460 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 FAM149B1Q96BN6 582 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 LRRC39Q96DD0 335 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 PGM2Q96G03 612 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 TPD52L3Q96J77 140 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 C7orf34Q96L11 122 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 FAM227BQ96M60 508 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 KLHL15Q96M94 604 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 C5orf34Q96MH7 638 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 MTMR9Q96QG7 549 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 EIF3CQ99613 913 aaKnown RBP3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 CLSTN3Q9BQT9 956 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 LLPHQ9BRT6 129 aaKnown RBP3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 WDR83Q9BRX9 315 aaKnown RBP3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 NTMT1Q9BV86 223 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 KIFC3Q9BVG8 833 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 TBC1D10AQ9BXI6 508 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 RTN4RQ9BZR6 473 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 SLC25A32Q9H2D1 315 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 DCTPP1Q9H773 170 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 SYNDIG1Q9H7V2 258 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 LIN7CQ9NUP9 197 aaKnown RBP3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 AGPAT5Q9NUQ2 364 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 SYBUQ9NX95 663 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 ALKBH4Q9NXW9 302 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 GDE1Q9NZC3 331 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 OR6C2Q9NZP2 312 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 CRNNQ9UBG3 495 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 VPS51Q9UID3 782 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 CD207Q9UJ71 328 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 HPSEQ9Y251 543 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 NUDCQ9Y266 331 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 DRG1Q9Y295 367 aaKnown RBP3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 PLEKHM1Q9Y4G2 1056 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 MAB21L2Q9Y586 359 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 ENTPD2Q9Y5L3 495 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 RAD54BQ9Y620 910 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 ACEP12821 1306 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 AOX1Q06278 1338 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 SPATA31A3Q5VYP0 1347 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 NPHP3Q7Z494 1330 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 RPTORQ8N122 1335 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 PLEKHG2Q9H7P9 1386 aa3.63□□□□□ -1.83
HMGB1P12-201ENST00000438594 CCDC180Q9P1Z9 1646 aa3.62□□□□□ -1.83
HMGB1P12-201ENST00000438594 LOC100509620A0A075B734 347 aa3.62□□□□□ -1.83
HMGB1P12-201ENST00000438594 A0A087WZY1 265 aa3.62□□□□□ -1.83
HMGB1P12-201ENST00000438594 TEX13CA0A0J9YWL9 993 aa3.62□□□□□ -1.83
HMGB1P12-201ENST00000438594 A0A1W2PN81 502 aa3.62□□□□□ -1.83
HMGB1P12-201ENST00000438594 GOLGA8OA6NCC3 632 aa3.62□□□□□ -1.83
HMGB1P12-201ENST00000438594 CFAP73A6NFT4 308 aa3.62□□□□□ -1.83
HMGB1P12-201ENST00000438594 FAM90A8PA6NJQ4 464 aa3.62□□□□□ -1.83
HMGB1P12-201ENST00000438594 LRRC53A6NM62 1247 aa3.62□□□□□ -1.83
HMGB1P12-201ENST00000438594 ZNF879B4DU55 563 aa3.62□□□□□ -1.83
HMGB1P12-201ENST00000438594 E9PI62 339 aa3.62□□□□□ -1.83
HMGB1P12-201ENST00000438594 GOLGA8NF8WBI6 632 aa3.62□□□□□ -1.83
HMGB1P12-201ENST00000438594 LEFTY2O00292 366 aa3.62□□□□□ -1.83
HMGB1P12-201ENST00000438594 ST8SIA3O43173 380 aa3.62□□□□□ -1.83
HMGB1P12-201ENST00000438594 NRP2O60462 931 aa3.62□□□□□ -1.83
HMGB1P12-201ENST00000438594 CCNT2O60583 730 aaKnown RBP3.62□□□□□ -1.83
HMGB1P12-201ENST00000438594 USP12O75317 370 aa3.62□□□□□ -1.83
HMGB1P12-201ENST00000438594 NIPSNAP2O75323 286 aa3.62□□□□□ -1.83
HMGB1P12-201ENST00000438594 AVILO75366 819 aa3.62□□□□□ -1.83
HMGB1P12-201ENST00000438594 GPR32O75388 356 aa3.62□□□□□ -1.83
HMGB1P12-201ENST00000438594 NME6O75414 186 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P12-201ENST00000438594 SCGB2A1O75556 95 aa3.62□□□□□ -1.83
HMGB1P12-201ENST00000438594 MFN2O95140 757 aa3.62□□□□□ -1.83
HMGB1P12-201ENST00000438594 OTCP00480 354 aa3.62□□□□□ -1.83
HMGB1P12-201ENST00000438594 FGBP02675 491 aa3.62□□□□□ -1.83
HMGB1P12-201ENST00000438594 CHRNA1P02708 482 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms