RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 MX2P20592 715 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 CSF2RBP32927 897 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 GARSP41250 739 aaKnown RBP8.19□□□□□ -1.1
CDH13-203ENST00000431540 SPINT3P49223 89 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 ZNF165P49910 485 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 EPHB1P54762 984 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 DCDC1P59894 354 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 TRAF2Q12933 501 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 PAFAH1B3Q15102 231 aaKnown RBP8.19□□□□□ -1.1
CDH13-203ENST00000431540 PDK2Q15119 407 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 CA9Q16790 459 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 HSP90AA4PQ58FG1 418 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 FIGNQ5HY92 759 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 CCDC122Q5T0U0 273 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 CCDC183Q5T5S1 534 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 HENMT1Q5T8I9 393 aaKnown RBP8.19□□□□□ -1.1
CDH13-203ENST00000431540 AGAP9Q5VTM2 703 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 PAPD7Q5XG87 772 aaKnown RBP8.19□□□□□ -1.1
CDH13-203ENST00000431540 LRRC66Q68CR7 880 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 KLHL35Q6PF15 583 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 C6orf15Q6UXA7 325 aaPredicted RBP8.19□□□□□ -1.1
CDH13-203ENST00000431540 KDELC2Q7Z4H8 507 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 PRSS42Q7Z5A4 293 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 FAM129CQ86XR2 697 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 PHYKPLQ8IUZ5 450 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 SFTPA2Q8IWL1 248 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 LINC00528Q8N1L1 170 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 PGBD5Q8N414 524 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 ATPAF2Q8N5M1 289 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 TEX19Q8NA77 164 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 OR8K5Q8NH50 307 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 BRSK1Q8TDC3 778 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 PDCD6IPQ8WUM4 868 aaKnown RBP8.19□□□□□ -1.1
CDH13-203ENST00000431540 KLHL6Q8WZ60 621 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 STARD8Q92502 1023 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 NCSTNQ92542 709 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 SYN2Q92777 582 aaPredicted RBP8.19□□□□□ -1.1
CDH13-203ENST00000431540 ITPKCQ96DU7 683 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 ZDHHC12Q96GR4 267 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 C9orf72Q96LT7 481 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 NSMCE3Q96MG7 304 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 CSPG4P5Q96PW8 444 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 ZSCAN5AQ9BUG6 496 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 NAT10Q9H0A0 1025 aaKnown RBP8.19□□□□□ -1.1
CDH13-203ENST00000431540 FAM83DQ9H4H8 585 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 ZNF768Q9H5H4 540 aaKnown RBP8.19□□□□□ -1.1
CDH13-203ENST00000431540 SIDT1Q9NXL6 827 aaKnown RBP8.19□□□□□ -1.1
CDH13-203ENST00000431540 CPNE7Q9UBL6 633 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 CNOT8Q9UFF9 292 aaKnown RBP8.19□□□□□ -1.1
CDH13-203ENST00000431540 PCSK1NQ9UHG2 260 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 IP6K2Q9UHH9 426 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 ZNHIT2Q9UHR6 403 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 CNOT6Q9ULM6 557 aaKnown RBP8.19□□□□□ -1.1
CDH13-203ENST00000431540 MAN2B2Q9Y2E5 1009 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 PCDHGA9Q9Y5G4 932 aaKnown RBP8.19□□□□□ -1.1
CDH13-203ENST00000431540 RPS6KL1Q9Y6S9 549 aa8.19□□□□□ -1.1
CDH13-203ENST00000431540 SHANK1Q9Y566 2161 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 CYSRT1A8MQ03 144 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 A8MX80 341 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 KMOO15229 486 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 GRID2O43424 1007 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 DDAH2O95865 285 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 RARAP10276 462 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 VCLP18206 1134 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 AMPD1P23109 780 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 POLD2P49005 469 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 KLK7P49862 253 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 UBE2IP63279 158 aaKnown RBP8.18□□□□□ -1.1
CDH13-203ENST00000431540 GALNT2Q10471 571 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 HADHQ16836 314 aaKnown RBP8.18□□□□□ -1.1
CDH13-203ENST00000431540 FILIP1LQ4L180 1135 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 NKAIN2Q5VXU1 208 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 ZDHHC20Q5W0Z9 365 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 SASS6Q6UVJ0 657 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 ARHGAP36Q6ZRI8 547 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 TMEM26Q6ZUK4 368 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 APTXQ7Z2E3 356 aaKnown RBP8.18□□□□□ -1.1
CDH13-203ENST00000431540 TIPARPQ7Z3E1 657 aaKnown RBP8.18□□□□□ -1.1
CDH13-203ENST00000431540 NETO2Q8NC67 525 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 UBXN4Q92575 508 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 PEBP4Q96S96 227 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 KRTAP4-12Q9BQ66 201 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 BPIFA3Q9BQP9 254 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 TIMM29Q9BSF4 260 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 MLPHQ9BV36 600 aaPredicted RBP8.18□□□□□ -1.1
CDH13-203ENST00000431540 TDRD1Q9BXT4 1180 aaKnown RBP8.18□□□□□ -1.1
CDH13-203ENST00000431540 TRIM4Q9C037 500 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 BRD8Q9H0E9 1235 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 SYTL2Q9HCH5 934 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 MAGEE1Q9HCI5 957 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 LRRC4CQ9HCJ2 640 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 MLXIPLQ9NP71 852 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 POT1Q9NUX5 634 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 TBC1D29Q9UFV1 150 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 ITPR2Q14571 2701 aa8.18□□□□□ -1.1
CDH13-203ENST00000431540 NOTCH2Q04721 2471 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 PRR19A6NJB7 356 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 MYO1FO00160 1098 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 CREG1O75629 220 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 RFPL1O75677 317 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms