RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 RIPK2O43353 540 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 UGT1A9O60656 530 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 NDUFS3O75489 264 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 CFIP05156 583 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 RETP07949 1114 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 ERVK-10P10266 1014 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 UGT1A6P19224 532 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 UGT1A1P22309 533 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 UGT1A4P22310 534 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 UGT1A3P35503 534 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 UGT1A5P35504 534 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 BLKP51451 505 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 NXPH1P58417 271 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 GPX6P59796 221 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 KYNUQ16719 465 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 TRIM61Q5EBN2 209 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 TRMT10BQ6PF06 316 aaKnown RBP10.89□□□□□ -0.67
CHD4-202ENST00000430771 IL27RAQ6UWB1 636 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 LAYNQ6UX15 382 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 CYS1Q717R9 158 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 SLC26A11Q86WA9 606 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 LRRC6Q86X45 466 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 SLC22A18ASQ8N1D0 253 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 C2CD4AQ8NCU7 369 aaPredicted RBP10.89□□□□□ -0.67
CHD4-202ENST00000430771 OR56A4Q8NGH8 313 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 FBF1Q8TES7 1133 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 UBLCP1Q8WVY7 318 aaPredicted RBP10.89□□□□□ -0.67
CHD4-202ENST00000430771 ZNF514Q96K75 400 aaPredicted RBP10.89□□□□□ -0.67
CHD4-202ENST00000430771 CYTH2Q99418 400 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 TSSK1BQ9BXA7 367 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 NUSAP1Q9BXS6 441 aaKnown RBP10.89□□□□□ -0.67
CHD4-202ENST00000430771 FUT8Q9BYC5 575 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 TXLNGYQ9BZA5 131 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 CCDC68Q9H2F9 335 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 ACSS3Q9H6R3 686 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 UGT1A7Q9HAW7 530 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 UGT1A10Q9HAW8 530 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 UGT1A8Q9HAW9 530 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 PLAC1Q9HBJ0 212 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 TRIM39Q9HCM9 518 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 MOCS1Q9NZB8 636 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 MARCH4Q9P2E8 410 aaPredicted RBP10.89□□□□□ -0.67
CHD4-202ENST00000430771 GNPTGQ9UJJ9 305 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 CNOT6Q9ULM6 557 aaKnown RBP10.89□□□□□ -0.67
CHD4-202ENST00000430771 SLC17A4Q9Y2C5 497 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 CACNA1HO95180 2353 aa10.89□□□□□ -0.67
CHD4-202ENST00000430771 IGLV3-16A0A075B6K0 115 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 SPTY2D1-AS1A0A0U1RR47 76 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 UBA6A0AVT1 1052 aaPredicted RBP10.88□□□□□ -0.67
CHD4-202ENST00000430771 PRSS38A1L453 326 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 FAM159BA6NKW6 160 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 PRMT5O14744 637 aaPredicted RBP10.88□□□□□ -0.67
CHD4-202ENST00000430771 YKT6O15498 198 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 MTX2O75431 263 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 AP2A2O94973 939 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 RASGRP1O95267 797 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 LMNAP02545 664 aaKnown RBP10.88□□□□□ -0.67
CHD4-202ENST00000430771 WNT1P04628 370 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 IVLP07476 585 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 SYPP08247 313 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 PRSS56P0CW18 603 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 RPS3P23396 243 aaKnown RBP eCLIP10.88□□□□□ -0.67
CHD4-202ENST00000430771 CD151P48509 253 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 CSNK1EP49674 416 aaKnown RBP10.88□□□□□ -0.67
CHD4-202ENST00000430771 CDKN1CP49918 316 aaPredicted RBP10.88□□□□□ -0.67
CHD4-202ENST00000430771 MPP1Q00013 466 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 SEMA3AQ14563 771 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 NAA30Q147X3 362 aaPredicted RBP10.88□□□□□ -0.67
CHD4-202ENST00000430771 KBTBD12Q3ZCT8 623 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 SLC23A3Q6PIS1 610 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 ENPP7Q6UWV6 458 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 KDM7AQ6ZMT4 941 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 MARK2Q7KZI7 788 aaKnown RBP10.88□□□□□ -0.67
CHD4-202ENST00000430771 TAOK1Q7L7X3 1001 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 GALNT13Q8IUC8 556 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 TRAPPC5Q8IUR0 188 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 DENND6AQ8IWF6 608 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 CTAGE3PQ8IX95 158 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 PIANPQ8IYJ0 282 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 UNC5BQ8IZJ1 945 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 CNPY4Q8N129 248 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 MREGQ8N565 214 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 SUMF1Q8NBK3 374 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 PDXPQ96GD0 296 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 OR2M4Q96R27 311 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 CPNE1Q99829 537 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 LGR4Q9BXB1 951 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 ZDHHC5Q9C0B5 715 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 CLPBQ9H078 707 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 OR2AG1Q9H205 316 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 ARRDC1-AS1Q9H2J1 176 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 FGF22Q9HCT0 170 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 TMEM74BQ9NUR3 256 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 FAM86C1Q9NVL1 165 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 NCDNQ9UBB6 729 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 MOSPD1Q9UJG1 213 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 FBXO5Q9UKT4 447 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 TMPRSS11EQ9UL52 423 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 CORO1CQ9ULV4 474 aaPredicted RBP10.88□□□□□ -0.67
CHD4-202ENST00000430771 SLC6A14Q9UN76 642 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms