RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 LUC7LQ9NQ29 371 aaKnown RBP12.37□□□□□ -0.43
SMPD4-204ENST00000430682 PRDM8Q9NQV8 689 aa12.37□□□□□ -0.43
SMPD4-204ENST00000430682 THSD1Q9NS62 852 aa12.37□□□□□ -0.43
SMPD4-204ENST00000430682 IL17CQ9P0M4 197 aa12.37□□□□□ -0.43
SMPD4-204ENST00000430682 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.37□□□□□ -0.43
SMPD4-204ENST00000430682 PRAMEF33A0A0G2JMD5 474 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 IGHV5-10-1A0A0J9YXX1 117 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 CCDC66A2RUB6 948 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 KLK10O43240 276 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 EFSO43281 561 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 MTSS1O43312 755 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 CPNE6O95741 557 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 FTCDO95954 541 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 EPOP01588 193 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 ITGA2BP08514 1039 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 RBP3P10745 1247 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 CCL4P13236 92 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 PSMB4P28070 264 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 CDC25BP30305 580 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 HMGCLP35914 325 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 FASLGP48023 281 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 RWDD2BP57060 319 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 EIF3EP60228 445 aaKnown RBP12.36□□□□□ -0.43
SMPD4-204ENST00000430682 CLN3Q13286 438 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 LRP8Q14114 963 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 TGIF1Q15583 401 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 CHRNA6Q15825 494 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 PLA2G4EQ3MJ16 856 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 ANKRD20A2Q5SQ80 823 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 PHF19Q5T6S3 580 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 ANKRD20A1Q5TYW2 823 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 ANKRD20A3Q5VUR7 823 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 IYDQ6PHW0 289 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 CRTC3Q6UUV7 619 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 C11orf96Q7Z7L8 435 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 KIAA1328Q86T90 577 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 CCDC110Q8TBZ0 833 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 NAT14Q8WUY8 206 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 KCNE4Q8WWG9 221 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 CCDC97Q96F63 343 aaPredicted RBP12.36□□□□□ -0.43
SMPD4-204ENST00000430682 TMEM74Q96NL1 305 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 FCRL3Q96P31 734 aaPredicted RBP12.36□□□□□ -0.43
SMPD4-204ENST00000430682 VAT1Q99536 393 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 APOL2Q9BQE5 337 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 ZSCAN5AQ9BUG6 496 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 FICDQ9BVA6 458 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 GBA3Q9H227 469 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 PISDQ9UG56 409 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 RSPH14Q9UHP6 348 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 EFR3BQ9Y2G0 817 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 R3HDM2Q9Y2K5 976 aaKnown RBP12.36□□□□□ -0.43
SMPD4-204ENST00000430682 LOXL2Q9Y4K0 774 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 KCTD3Q9Y597 815 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 CAPN6Q9Y6Q1 641 aa12.36□□□□□ -0.43
SMPD4-204ENST00000430682 TENM4Q6N022 2769 aa12.35□□□□□ -0.43
SMPD4-204ENST00000430682 SNX2O60749 519 aa12.35□□□□□ -0.43
SMPD4-204ENST00000430682 BRAFP15056 766 aa12.35□□□□□ -0.43
SMPD4-204ENST00000430682 GPR3P46089 330 aa12.35□□□□□ -0.43
SMPD4-204ENST00000430682 CXADRP78310 365 aa12.35□□□□□ -0.43
SMPD4-204ENST00000430682 KLF1Q13351 362 aaPredicted RBP12.35□□□□□ -0.43
SMPD4-204ENST00000430682 MPP3Q13368 585 aa12.35□□□□□ -0.43
SMPD4-204ENST00000430682 SQSTM1Q13501 440 aa12.35□□□□□ -0.43
SMPD4-204ENST00000430682 SPARCL1Q14515 664 aa12.35□□□□□ -0.43
SMPD4-204ENST00000430682 MAP9Q49MG5 647 aa12.35□□□□□ -0.43
SMPD4-204ENST00000430682 DENND5AQ6IQ26 1287 aa12.35□□□□□ -0.43
SMPD4-204ENST00000430682 RANBP10Q6VN20 620 aa12.35□□□□□ -0.43
SMPD4-204ENST00000430682 PIM3Q86V86 326 aa12.35□□□□□ -0.43
SMPD4-204ENST00000430682 BLOC1S5Q8TDH9 187 aa12.35□□□□□ -0.43
SMPD4-204ENST00000430682 CCDC74BQ96LY2 380 aa12.35□□□□□ -0.43
SMPD4-204ENST00000430682 PLEKHG4BQ96PX9 1271 aa12.35□□□□□ -0.43
SMPD4-204ENST00000430682 VPS35Q96QK1 796 aa12.35□□□□□ -0.43
SMPD4-204ENST00000430682 ANP32EQ9BTT0 268 aa12.35□□□□□ -0.43
SMPD4-204ENST00000430682 TBC1D10AQ9BXI6 508 aa12.35□□□□□ -0.43
SMPD4-204ENST00000430682 STRADBQ9C0K7 418 aa12.35□□□□□ -0.43
SMPD4-204ENST00000430682 RMI1Q9H9A7 625 aa12.35□□□□□ -0.43
SMPD4-204ENST00000430682 KLC4Q9NSK0 619 aa12.35□□□□□ -0.43
SMPD4-204ENST00000430682 FOXJ2Q9P0K8 574 aa12.35□□□□□ -0.43
SMPD4-204ENST00000430682 ZNF624Q9P2J8 865 aaPredicted RBP12.35□□□□□ -0.43
SMPD4-204ENST00000430682 TRHDEQ9UKU6 1024 aa12.35□□□□□ -0.43
SMPD4-204ENST00000430682 ARL5AQ9Y689 179 aa12.35□□□□□ -0.43
SMPD4-204ENST00000430682 SPTBP11277 2137 aa12.34□□□□□ -0.43
SMPD4-204ENST00000430682 ZNF462Q96JM2 2506 aa12.34□□□□□ -0.43
SMPD4-204ENST00000430682 COL6A6A6NMZ7 2263 aa12.34□□□□□ -0.43
SMPD4-204ENST00000430682 C9orf172C9J069 976 aa12.34□□□□□ -0.43
SMPD4-204ENST00000430682 TMX2-CTNND1H3BSU7 103 aa12.34□□□□□ -0.43
SMPD4-204ENST00000430682 KCNN4O15554 427 aa12.34□□□□□ -0.43
SMPD4-204ENST00000430682 PRAMEF10O60809 474 aa12.34□□□□□ -0.43
SMPD4-204ENST00000430682 IPO7O95373 1038 aaKnown RBP12.34□□□□□ -0.43
SMPD4-204ENST00000430682 FGF3P11487 239 aaPredicted RBP12.34□□□□□ -0.43
SMPD4-204ENST00000430682 F3P13726 295 aa12.34□□□□□ -0.43
SMPD4-204ENST00000430682 ZNF7P17097 686 aaPredicted RBP12.34□□□□□ -0.43
SMPD4-204ENST00000430682 CTSCP53634 463 aa12.34□□□□□ -0.43
SMPD4-204ENST00000430682 LIMK2P53671 638 aa12.34□□□□□ -0.43
SMPD4-204ENST00000430682 MAPK10P53779 464 aa12.34□□□□□ -0.43
SMPD4-204ENST00000430682 UBE2IP63279 158 aaKnown RBP12.34□□□□□ -0.43
SMPD4-204ENST00000430682 TMEM115Q12893 351 aaPredicted RBP12.34□□□□□ -0.43
SMPD4-204ENST00000430682 EIF3IQ13347 325 aaKnown RBP12.34□□□□□ -0.43
SMPD4-204ENST00000430682 NFATC2Q13469 925 aa12.34□□□□□ -0.43
SMPD4-204ENST00000430682 CCDC181Q5TID7 509 aa12.34□□□□□ -0.43
SMPD4-204ENST00000430682 PDPK2PQ6A1A2 396 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms