RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 PKP3Q9Y446 797 aa17.39■□□□□ 0.37
NUP50-208ENST00000430547 ZNF106Q9H2Y7 1883 aaKnown RBP17.39■□□□□ 0.37
NUP50-208ENST00000430547 CDRT15L2A8MXV6 281 aa17.38■□□□□ 0.37
NUP50-208ENST00000430547 AGRPO00253 132 aa17.38■□□□□ 0.37
NUP50-208ENST00000430547 PPM1DO15297 605 aa17.38■□□□□ 0.37
NUP50-208ENST00000430547 B4GAT1O43505 415 aa17.38■□□□□ 0.37
NUP50-208ENST00000430547 PYGMP11217 842 aa17.38■□□□□ 0.37
NUP50-208ENST00000430547 SPAM1P38567 509 aa17.38■□□□□ 0.37
NUP50-208ENST00000430547 FASLGP48023 281 aa17.38■□□□□ 0.37
NUP50-208ENST00000430547 HHEXQ03014 270 aa17.38■□□□□ 0.37
NUP50-208ENST00000430547 ZFP36L1Q07352 338 aaKnown RBP17.38■□□□□ 0.37
NUP50-208ENST00000430547 GTF2H3Q13889 308 aa17.38■□□□□ 0.37
NUP50-208ENST00000430547 ZNF648Q5T619 568 aaPredicted RBP17.38■□□□□ 0.37
NUP50-208ENST00000430547 CRTC3Q6UUV7 619 aa17.38■□□□□ 0.37
NUP50-208ENST00000430547 USP53Q70EK8 1073 aa17.38■□□□□ 0.37
NUP50-208ENST00000430547 CLEC14AQ86T13 490 aa17.38■□□□□ 0.37
NUP50-208ENST00000430547 SLC9B2Q86UD5 537 aa17.38■□□□□ 0.37
NUP50-208ENST00000430547 LRRTM4Q86VH4 590 aa17.38■□□□□ 0.37
NUP50-208ENST00000430547 SLITRK4Q8IW52 837 aa17.38■□□□□ 0.37
NUP50-208ENST00000430547 SFRP1Q8N474 314 aa17.38■□□□□ 0.37
NUP50-208ENST00000430547 AVL9Q8NBF6 648 aa17.38■□□□□ 0.37
NUP50-208ENST00000430547 TTC25Q96NG3 672 aa17.38■□□□□ 0.37
NUP50-208ENST00000430547 PPP1R2P1Q96PQ5 205 aa17.38■□□□□ 0.37
NUP50-208ENST00000430547 VPS35Q96QK1 796 aa17.38■□□□□ 0.37
NUP50-208ENST00000430547 FAM118BQ9BPY3 351 aa17.38■□□□□ 0.37
NUP50-208ENST00000430547 FICDQ9BVA6 458 aa17.38■□□□□ 0.37
NUP50-208ENST00000430547 SEMA6CQ9H3T2 930 aa17.38■□□□□ 0.37
NUP50-208ENST00000430547 WDR70Q9NW82 654 aa17.38■□□□□ 0.37
NUP50-208ENST00000430547 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.38■□□□□ 0.37
NUP50-208ENST00000430547 AAR2Q9Y312 384 aaKnown RBP17.38■□□□□ 0.37
NUP50-208ENST00000430547 PCYT1BQ9Y5K3 369 aaPredicted RBP17.38■□□□□ 0.37
NUP50-208ENST00000430547 PTPRQQ9UMZ3 2332 aa17.38■□□□□ 0.37
NUP50-208ENST00000430547 KMOO15229 486 aa17.37■□□□□ 0.37
NUP50-208ENST00000430547 VEGFDO43915 354 aa17.37■□□□□ 0.37
NUP50-208ENST00000430547 CDK14O94921 469 aa17.37■□□□□ 0.37
NUP50-208ENST00000430547 F3P13726 295 aa17.37■□□□□ 0.37
NUP50-208ENST00000430547 HGFP14210 728 aa17.37■□□□□ 0.37
NUP50-208ENST00000430547 TMPRSS3P57727 454 aa17.37■□□□□ 0.37
NUP50-208ENST00000430547 CXADRP78310 365 aa17.37■□□□□ 0.37
NUP50-208ENST00000430547 GPLD1P80108 840 aa17.37■□□□□ 0.37
NUP50-208ENST00000430547 PLA2G4EQ3MJ16 856 aa17.37■□□□□ 0.37
NUP50-208ENST00000430547 ANKRD20A2Q5SQ80 823 aa17.37■□□□□ 0.37
NUP50-208ENST00000430547 ANKRD20A1Q5TYW2 823 aa17.37■□□□□ 0.37
NUP50-208ENST00000430547 ANKRD20A3Q5VUR7 823 aa17.37■□□□□ 0.37
NUP50-208ENST00000430547 AADACL2Q6P093 401 aa17.37■□□□□ 0.37
NUP50-208ENST00000430547 ADGRG6Q86SQ4 1221 aa17.37■□□□□ 0.37
NUP50-208ENST00000430547 TTC30BQ8N4P2 665 aa17.37■□□□□ 0.37
NUP50-208ENST00000430547 TTC13Q8NBP0 860 aa17.37■□□□□ 0.37
NUP50-208ENST00000430547 OR10G6Q8NH81 332 aa17.37■□□□□ 0.37
NUP50-208ENST00000430547 SH3KBP1Q96B97 665 aa17.37■□□□□ 0.37
NUP50-208ENST00000430547 DPYSL5Q9BPU6 564 aa17.37■□□□□ 0.37
NUP50-208ENST00000430547 NUDT22Q9BRQ3 303 aa17.37■□□□□ 0.37
NUP50-208ENST00000430547 ZCCHC2Q9C0B9 1178 aaKnown RBP17.37■□□□□ 0.37
NUP50-208ENST00000430547 KLC4Q9NSK0 619 aa17.37■□□□□ 0.37
NUP50-208ENST00000430547 TRIM10Q9UDY6 481 aa17.37■□□□□ 0.37
NUP50-208ENST00000430547 TBC1D29Q9UFV1 150 aa17.37■□□□□ 0.37
NUP50-208ENST00000430547 PACSIN2Q9UNF0 486 aaPredicted RBP17.37■□□□□ 0.37
NUP50-208ENST00000430547 CACNA1GO43497 2377 aa17.37■□□□□ 0.37
NUP50-208ENST00000430547 BPTFQ12830 3046 aa17.36■□□□□ 0.37
NUP50-208ENST00000430547 IGHV1OR21-1A0A087WYE8 117 aa17.36■□□□□ 0.37
NUP50-208ENST00000430547 KIR2DS5A0A0G2JLQ3 304 aa17.36■□□□□ 0.37
NUP50-208ENST00000430547 A0A0G2JNG1 304 aa17.36■□□□□ 0.37
NUP50-208ENST00000430547 OR5K4A6NMS3 321 aa17.36■□□□□ 0.37
NUP50-208ENST00000430547 KIR2DS3K7RE56 304 aa17.36■□□□□ 0.37
NUP50-208ENST00000430547 DUX1O43812 170 aa17.36■□□□□ 0.37
NUP50-208ENST00000430547 PPFIA2O75334 1257 aa17.36■□□□□ 0.37
NUP50-208ENST00000430547 MTX2O75431 263 aa17.36■□□□□ 0.37
NUP50-208ENST00000430547 FTCDO95954 541 aa17.36■□□□□ 0.37
NUP50-208ENST00000430547 VCLP18206 1134 aa17.36■□□□□ 0.37
NUP50-208ENST00000430547 PSMB4P28070 264 aa17.36■□□□□ 0.37
NUP50-208ENST00000430547 CD1CP29017 333 aa17.36■□□□□ 0.37
NUP50-208ENST00000430547 SLC5A2P31639 672 aa17.36■□□□□ 0.37
NUP50-208ENST00000430547 MAPK10P53779 464 aa17.36■□□□□ 0.37
NUP50-208ENST00000430547 GSDMDP57764 484 aa17.36■□□□□ 0.37
NUP50-208ENST00000430547 ITGA9Q13797 1035 aa17.36■□□□□ 0.37
NUP50-208ENST00000430547 KIR2DS5Q14953 304 aa17.36■□□□□ 0.37
NUP50-208ENST00000430547 ATP13A5Q4VNC0 1218 aa17.36■□□□□ 0.37
NUP50-208ENST00000430547 NKAIN2Q5VXU1 208 aa17.36■□□□□ 0.37
NUP50-208ENST00000430547 IYDQ6PHW0 289 aa17.36■□□□□ 0.37
NUP50-208ENST00000430547 FAM151BQ6UXP7 276 aa17.36■□□□□ 0.37
NUP50-208ENST00000430547 TMPRSS9Q7Z410 1059 aa17.36■□□□□ 0.37
NUP50-208ENST00000430547 ZNF761Q86XN6 746 aaPredicted RBP17.36■□□□□ 0.37
NUP50-208ENST00000430547 SPATA13Q96N96 652 aa17.36■□□□□ 0.37
NUP50-208ENST00000430547 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.36■□□□□ 0.37
NUP50-208ENST00000430547 TSGA10Q9BZW7 698 aa17.36■□□□□ 0.37
NUP50-208ENST00000430547 PRORYQ9H606 182 aa17.36■□□□□ 0.37
NUP50-208ENST00000430547 SARS2Q9NP81 518 aaKnown RBP17.36■□□□□ 0.37
NUP50-208ENST00000430547 IL17CQ9P0M4 197 aa17.36■□□□□ 0.37
NUP50-208ENST00000430547 PCDHGA7Q9Y5G6 932 aa17.36■□□□□ 0.37
NUP50-208ENST00000430547 GLYATL1P3A0A0U1RQE8 302 aa17.35■□□□□ 0.37
NUP50-208ENST00000430547 C2orf81A6NN90 581 aa17.35■□□□□ 0.37
NUP50-208ENST00000430547 HGSO14964 777 aaPredicted RBP17.35■□□□□ 0.37
NUP50-208ENST00000430547 CHUKO15111 745 aa17.35■□□□□ 0.37
NUP50-208ENST00000430547 STX7O15400 261 aaKnown RBP17.35■□□□□ 0.37
NUP50-208ENST00000430547 BUD23O43709 281 aaKnown RBP17.35■□□□□ 0.37
NUP50-208ENST00000430547 EML2O95834 649 aa17.35■□□□□ 0.37
NUP50-208ENST00000430547 AGTP01019 485 aa17.35■□□□□ 0.37
NUP50-208ENST00000430547 ZNF7P17097 686 aaPredicted RBP17.35■□□□□ 0.37
NUP50-208ENST00000430547 ITIH1P19827 911 aa17.35■□□□□ 0.37
NUP50-208ENST00000430547 CLCNKAP51800 687 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms