RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 TFEBP19484 476 aa12.83□□□□□ -0.36
PTCH1-207ENST00000429896 BGNP21810 368 aa12.83□□□□□ -0.36
PTCH1-207ENST00000429896 CSNK2BP67870 215 aa12.83□□□□□ -0.36
PTCH1-207ENST00000429896 TRAF7Q6Q0C0 670 aa12.83□□□□□ -0.36
PTCH1-207ENST00000429896 RAB7BQ96AH8 199 aa12.83□□□□□ -0.36
PTCH1-207ENST00000429896 NACC2Q96BF6 587 aa12.83□□□□□ -0.36
PTCH1-207ENST00000429896 INTS7Q9NVH2 962 aaKnown RBP12.83□□□□□ -0.36
PTCH1-207ENST00000429896 CCT8L1PA6NM43 557 aa12.83□□□□□ -0.36
PTCH1-207ENST00000429896 CHRNA4P43681 627 aa12.83□□□□□ -0.36
PTCH1-207ENST00000429896 SUZ12Q15022 739 aaKnown RBP12.83□□□□□ -0.36
PTCH1-207ENST00000429896 SLC1A5Q15758 541 aa12.83□□□□□ -0.36
PTCH1-207ENST00000429896 INO80DQ53TQ3 878 aaPredicted RBP12.83□□□□□ -0.36
PTCH1-207ENST00000429896 TCP10LQ8TDR4 215 aa12.83□□□□□ -0.36
PTCH1-207ENST00000429896 SLC2A4RGQ9NR83 387 aa12.83□□□□□ -0.36
PTCH1-207ENST00000429896 HEBP2Q9Y5Z4 205 aa12.83□□□□□ -0.36
PTCH1-207ENST00000429896 SCAMP1O15126 338 aa12.83□□□□□ -0.36
PTCH1-207ENST00000429896 KLHL2O95198 593 aa12.83□□□□□ -0.36
PTCH1-207ENST00000429896 METTL18O95568 372 aa12.83□□□□□ -0.36
PTCH1-207ENST00000429896 SERPINE1P05121 402 aa12.83□□□□□ -0.36
PTCH1-207ENST00000429896 HSMCR30P0CW71 290 aa12.83□□□□□ -0.36
PTCH1-207ENST00000429896 TRPM8Q7Z2W7 1104 aa12.83□□□□□ -0.36
PTCH1-207ENST00000429896 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.83□□□□□ -0.36
PTCH1-207ENST00000429896 APCDD1Q8J025 514 aa12.83□□□□□ -0.36
PTCH1-207ENST00000429896 CENPLQ8N0S6 344 aaPredicted RBP12.83□□□□□ -0.36
PTCH1-207ENST00000429896 GSTCDQ8NEC7 633 aa12.83□□□□□ -0.36
PTCH1-207ENST00000429896 KRT84Q9NSB2 600 aa12.83□□□□□ -0.36
PTCH1-207ENST00000429896 POLR2AP24928 1970 aaKnown RBP12.82□□□□□ -0.36
PTCH1-207ENST00000429896 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-207ENST00000429896 EVPLLA8MZ36 301 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 NR5A2O00482 541 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 SERPINB10P48595 397 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 NAA20P61599 178 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 CYP1B1Q16678 543 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 LYSMD3Q7Z3D4 306 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 METTL6Q8TCB7 284 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 ZNF514Q96K75 400 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-207ENST00000429896 ROGDIQ9GZN7 287 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 CARS2Q9HA77 564 aaKnown RBP12.82□□□□□ -0.36
PTCH1-207ENST00000429896 EIF2S1P05198 315 aaKnown RBP12.82□□□□□ -0.36
PTCH1-207ENST00000429896 NSG1P42857 185 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 ITIH4Q14624 930 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 PRKD1Q15139 912 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-207ENST00000429896 DCAF12L1Q5VU92 463 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 ESRP1Q6NXG1 681 aaKnown RBP12.82□□□□□ -0.36
PTCH1-207ENST00000429896 PTGR2Q8N8N7 351 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-207ENST00000429896 KCTD4Q8WVF5 259 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 SNRNP27Q8WVK2 155 aaKnown RBP12.82□□□□□ -0.36
PTCH1-207ENST00000429896 MCCC1Q96RQ3 725 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-207ENST00000429896 SEMA4BQ9NPR2 832 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-207ENST00000429896 OGNP20774 298 aaKnown RBP12.82□□□□□ -0.36
PTCH1-207ENST00000429896 PTGER3P43115 390 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 RPIAP49247 311 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 ZNF844Q08AG5 666 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 GPR33Q49SQ1 333 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 CYP20A1Q6UW02 462 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 TMPRSS6Q8IU80 811 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 ZNF786Q8N393 782 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 BCL7CQ8WUZ0 217 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-207ENST00000429896 SORCS1Q8WY21 1168 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 TSGA13Q96PP4 275 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 TCF12Q99081 682 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 SLC7A4O43246 635 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 POLD2P49005 469 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 PLK1P53350 603 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 MAD2L1Q13257 205 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-207ENST00000429896 ELAVL3Q14576 367 aaKnown RBP12.82□□□□□ -0.36
PTCH1-207ENST00000429896 CCT7Q99832 543 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 RTP3Q9BQQ7 232 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 OSBPL7Q9BZF2 842 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 OSBPL6Q9BZF3 934 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 RMND5AQ9H871 391 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 TRPC4Q9UBN4 977 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 STON1Q9Y6Q2 735 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 ATAD5Q96QE3 1844 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 ANKRD66B4E2M5 251 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 ZNF217O75362 1048 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 LRRC66Q68CR7 880 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 TXNDC11Q6PKC3 985 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 PAQR9Q6ZVX9 377 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 P3H2Q8IVL5 708 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 MAFAQ8NHW3 353 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-207ENST00000429896 MFSD3Q96ES6 412 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 RNF38Q9H0F5 515 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 MIEF1Q9NQG6 463 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 IL1RAPL1Q9NZN1 696 aa12.82□□□□□ -0.36
PTCH1-207ENST00000429896 FAM170BA6NMN3 283 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 SOCS5O75159 536 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 ASGR2P07307 311 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 PTGIRP43119 386 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 ARRB1P49407 418 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-207ENST00000429896 NR6A1Q15406 480 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 ATP6AP1LQ52LC2 224 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 ISLR2Q6UXK2 745 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 MFSD6LQ8IWD5 586 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 PCYOX1LQ8NBM8 494 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 MRPL57Q9BQC6 102 aaKnown RBP12.81□□□□□ -0.36
PTCH1-207ENST00000429896 ACE2Q9BYF1 805 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-207ENST00000429896 SNX15Q9NRS6 342 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 A0A1W2PP55 124 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 DCLK1O15075 740 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms