RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 PCDHAC1Q9H158 963 aa8.65□□□□□ -1.02
GABPB1-205ENST00000429662 AKTIPQ9H8T0 292 aa8.65□□□□□ -1.02
GABPB1-205ENST00000429662 SPC25Q9HBM1 224 aa8.65□□□□□ -1.02
GABPB1-205ENST00000429662 SDR39U1Q9NRG7 319 aaPredicted RBP8.65□□□□□ -1.02
GABPB1-205ENST00000429662 TMLHEQ9NVH6 421 aa8.65□□□□□ -1.02
GABPB1-205ENST00000429662 SFMBT1Q9UHJ3 866 aa8.65□□□□□ -1.02
GABPB1-205ENST00000429662 RNF11Q9Y3C5 154 aa8.65□□□□□ -1.02
GABPB1-205ENST00000429662 FIS1Q9Y3D6 152 aa8.65□□□□□ -1.02
GABPB1-205ENST00000429662 A0A0U1RQF3 1178 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 A0A1W2PP18 115 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 A0A1W2PQH9 124 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 DHRS12A0PJE2 317 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 TRIM64A6NGJ6 449 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 ZBBXA8MT70 800 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 H3BQ06 376 aaPredicted RBP8.64□□□□□ -1.03
GABPB1-205ENST00000429662 UBFD1O14562 309 aaKnown RBP8.64□□□□□ -1.03
GABPB1-205ENST00000429662 CD3EAPO15446 510 aaKnown RBP8.64□□□□□ -1.03
GABPB1-205ENST00000429662 AKAP10O43572 662 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 KERAO60938 352 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 CRCPO75575 148 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 SOAT2O75908 522 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 MLYCDO95822 493 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 PYGLP06737 847 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 MMP2P08253 660 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 ATXN1LP0C7T5 689 aaKnown RBP8.64□□□□□ -1.03
GABPB1-205ENST00000429662 HOXB6P17509 224 aaKnown RBP8.64□□□□□ -1.03
GABPB1-205ENST00000429662 PSMA3P25788 255 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 GRIA3P42263 894 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 MAGEA11P43364 429 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 CDKN2DP55273 166 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 EEFSECP57772 596 aaKnown RBP8.64□□□□□ -1.03
GABPB1-205ENST00000429662 KCNK10P57789 538 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 YWHAHQ04917 246 aaPredicted RBP8.64□□□□□ -1.03
GABPB1-205ENST00000429662 RAD51Q06609 339 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 LCP2Q13094 533 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 DSC3Q14574 896 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 CYTH1Q15438 398 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 TRIP4Q15650 581 aaPredicted RBP8.64□□□□□ -1.03
GABPB1-205ENST00000429662 ATP6AP1Q15904 470 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 NRF1Q16656 503 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 PPP1R3AQ16821 1122 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 TYSND1Q2T9J0 566 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 ZBED5Q49AG3 693 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 MTX3Q5HYI7 312 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 SIRPB2Q5JXA9 342 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 TBCELQ5QJ74 424 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 ANKS6Q68DC2 871 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 DHRS4L2Q6PKH6 230 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 CD300LGQ6UXG3 332 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 GPR141Q7Z602 305 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 SPRED1Q7Z699 444 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 AMIGO2Q86SJ2 522 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 C14orf80Q86SX3 495 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 ZNF598Q86UK7 904 aaKnown RBP8.64□□□□□ -1.03
GABPB1-205ENST00000429662 SERINC5Q86VE9 423 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 LRRTM3Q86VH5 581 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 PTRH1Q86Y79 214 aaKnown RBP8.64□□□□□ -1.03
GABPB1-205ENST00000429662 GALNT13Q8IUC8 556 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 FUNDC1Q8IVP5 155 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 ADHFE1Q8IWW8 467 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 TBC1D21Q8IYX1 336 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.64□□□□□ -1.03
GABPB1-205ENST00000429662 AADATQ8N5Z0 425 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 PTGR2Q8N8N7 351 aaPredicted RBP8.64□□□□□ -1.03
GABPB1-205ENST00000429662 FAM156AQ8NDB6 213 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 PAPD5Q8NDF8 572 aaKnown RBP8.64□□□□□ -1.03
GABPB1-205ENST00000429662 TRPV3Q8NET8 790 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 OR10T2Q8NGX3 314 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 SCAMP5Q8TAC9 235 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 ZNF420Q8TAQ5 688 aaPredicted RBP8.64□□□□□ -1.03
GABPB1-205ENST00000429662 ARRDC2Q8TBH0 407 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 PNPT1Q8TCS8 783 aaKnown RBP8.64□□□□□ -1.03
GABPB1-205ENST00000429662 MIPOL1Q8TD10 442 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 TWIST2Q8WVJ9 160 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 ANKRD49Q8WVL7 239 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 HMCESQ96FZ2 354 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 ZNF419Q96HQ0 510 aaPredicted RBP8.64□□□□□ -1.03
GABPB1-205ENST00000429662 CNDP2Q96KP4 475 aaKnown RBP8.64□□□□□ -1.03
GABPB1-205ENST00000429662 MYRFLQ96LU7 910 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 AARSD1Q9BTE6 412 aaKnown RBP8.64□□□□□ -1.03
GABPB1-205ENST00000429662 SEMA6AQ9H2E6 1030 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 CCDC68Q9H2F9 335 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 NOL6Q9H6R4 1146 aaKnown RBP8.64□□□□□ -1.03
GABPB1-205ENST00000429662 CAAP1Q9H8G2 361 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 NOL11Q9H8H0 719 aaKnown RBP8.64□□□□□ -1.03
GABPB1-205ENST00000429662 AGO3Q9H9G7 860 aaKnown RBP8.64□□□□□ -1.03
GABPB1-205ENST00000429662 MID1IP1Q9NPA3 183 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 ACSS2Q9NR19 701 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 CATSPERZQ9NTU4 200 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 OLAHQ9NV23 265 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 RIC8BQ9NVN3 520 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 IL37Q9NZH6 218 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.64□□□□□ -1.034e-6■■■■□ 20.4
GABPB1-205ENST00000429662 LEF1Q9UJU2 399 aaPredicted RBP8.64□□□□□ -1.03
GABPB1-205ENST00000429662 DNAJC15Q9Y5T4 150 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 COMMD10Q9Y6G5 202 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 SPTBN2O15020 2390 aa8.64□□□□□ -1.03
GABPB1-205ENST00000429662 FRYQ5TBA9 3013 aa8.63□□□□□ -1.03
GABPB1-205ENST00000429662 TTC24A2A3L6 582 aaPredicted RBP8.63□□□□□ -1.03
GABPB1-205ENST00000429662 ZNF839A8K0R7 811 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms