RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 PEX6Q13608 980 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PLA2G4EQ3MJ16 856 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 AMZ1Q400G9 498 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ANKRD20A2Q5SQ80 823 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 SEL1L2Q5TEA6 688 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ANKRD20A1Q5TYW2 823 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ANKRD20A3Q5VUR7 823 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PDPK2PQ6A1A2 396 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 FOXR1Q6PIV2 292 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 C19orf48Q6RUI8 117 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 FAM151BQ6UXP7 276 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ARHGEF18Q6ZSZ5 1173 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 CHST15Q7LFX5 561 aaPredicted RBP9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 NAGSQ8N159 534 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ARL14Q8N4G2 192 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 RNF10Q8N5U6 811 aaKnown RBP9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 FAM71DQ8N9W8 422 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 SLC37A2Q8TED4 501 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ATG4AQ8WYN0 398 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 HES6Q96HZ4 224 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PLEKHG4BQ96PX9 1271 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 OR2AG1Q9H205 316 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 CARD9Q9H257 536 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 OSGEPL1Q9H4B0 414 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 TRABDQ9H4I3 376 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 RMI1Q9H9A7 625 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 POLR1BQ9H9Y6 1135 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 EPB41L5Q9HCM4 733 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ATP13A2Q9NQ11 1180 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 HACD3Q9P035 362 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ATXN10Q9UBB4 475 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 RALYQ9UKM9 306 aaKnown RBP9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PKP3Q9Y446 797 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ARL5AQ9Y689 179 aa9.12□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PKD1L2Q7Z442 2459 aa9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 GOLGA4Q13439 2230 aaKnown RBP9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 A0A1W2PNU3 283 aaPredicted RBP9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 GRID2O43424 1007 aa9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 NUAK1O60285 661 aa9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 SNX2O60749 519 aa9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ZNF189O75820 626 aaPredicted RBP9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 EML2O95834 649 aa9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 CCDC175P0C221 793 aa9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ALDH4A1P30038 563 aa9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ACTN2P35609 894 aa9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 HMGCLP35914 325 aa9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 SPAM1P38567 509 aa9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 LSSP48449 732 aa9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PPM1FP49593 454 aaPredicted RBP9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 INHBCP55103 352 aa9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 OR1D5P58170 312 aa9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 SPARCL1Q14515 664 aa9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 CHRNA6Q15825 494 aa9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 TBC1D25Q3MII6 688 aa9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ATP13A5Q4VNC0 1218 aa9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 KHDC1Q4VXA5 237 aaKnown RBP9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ZNF438Q7Z4V0 828 aa9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ADGRG6Q86SQ4 1221 aa9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 C17orf82Q86X59 251 aaPredicted RBP9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ZNF761Q86XN6 746 aaPredicted RBP9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 TAB3Q8N5C8 712 aaPredicted RBP9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 GDAP1Q8TB36 358 aa9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 HNRNPLLQ8WVV9 542 aaKnown RBP9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 GRAMD1AQ96CP6 724 aa9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ALS2CR12Q96Q35 445 aa9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 RDH14Q9HBH5 336 aa9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 IL26Q9NPH9 171 aa9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 LZTFL1Q9NQ48 299 aa9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 TBC1D29Q9UFV1 150 aa9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 APPL1Q9UKG1 709 aa9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 DNAJC16Q9Y2G8 782 aa9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 SHROOM3Q8TF72 1996 aa9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 KMT2BQ9UMN6 2715 aaPredicted RBP9.11□□□□□ -0.95
RFX3-AS1-202ENST00000427722 TRBV23OR9-2A0A075B6M9 112 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 CCDC187A0A096LP49 1063 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 GLYATL1P3A0A0U1RQE8 302 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 GPR89AB7ZAQ6 455 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 STX7O15400 261 aaKnown RBP9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 RRP8O43159 456 aaKnown RBP9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 NRDCO43847 1150 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PRAMEF1O95521 474 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 GPR89BP0CG08 455 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PNLIPP16233 465 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 RBMS1P29558 406 aaKnown RBP9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 CSF2RBP32927 897 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ADRA1AP35348 466 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 ABCG1P45844 678 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 GDF10P55107 478 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PCBP4P57723 403 aaKnown RBP9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 CCZ1BP86790 482 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 CCZ1P86791 482 aaPredicted RBP9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 B4GALNT1Q00973 533 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 CCDC173Q0VFZ6 552 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 GTF2H3Q13889 308 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PTPRCAPQ14761 206 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 RPS6KA1Q15418 735 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 INSCQ1MX18 579 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 COL28A1Q2UY09 1125 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 PHF19Q5T6S3 580 aa9.1□□□□□ -0.95
RFX3-AS1-202ENST00000427722 NKAIN2Q5VXU1 208 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms