RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 RHPN2P1A8MT19 583 aa14.69□□□□□ -0.06
RTN4-210ENST00000427710 PPM1DO15297 605 aa14.69□□□□□ -0.06
RTN4-210ENST00000427710 B4GAT1O43505 415 aa14.69□□□□□ -0.06
RTN4-210ENST00000427710 CEP104O60308 925 aa14.69□□□□□ -0.06
RTN4-210ENST00000427710 BRINP1O60477 761 aa14.69□□□□□ -0.06
RTN4-210ENST00000427710 FGGP02679 453 aa14.69□□□□□ -0.06
RTN4-210ENST00000427710 ZSCAN5DPP0CG00 497 aa14.69□□□□□ -0.06
RTN4-210ENST00000427710 LPOP22079 712 aaPredicted RBP14.69□□□□□ -0.06
RTN4-210ENST00000427710 PDX1P52945 283 aa14.69□□□□□ -0.06
RTN4-210ENST00000427710 BIRC2Q13490 618 aa14.69□□□□□ -0.06
RTN4-210ENST00000427710 TAF1AQ15573 450 aaPredicted RBP14.69□□□□□ -0.06
RTN4-210ENST00000427710 AMZ1Q400G9 498 aa14.69□□□□□ -0.06
RTN4-210ENST00000427710 C3orf38Q5JPI3 329 aa14.69□□□□□ -0.06
RTN4-210ENST00000427710 FOXR1Q6PIV2 292 aa14.69□□□□□ -0.06
RTN4-210ENST00000427710 TMPRSS9Q7Z410 1059 aa14.69□□□□□ -0.06
RTN4-210ENST00000427710 SPRED1Q7Z699 444 aa14.69□□□□□ -0.06
RTN4-210ENST00000427710 C17orf82Q86X59 251 aaPredicted RBP14.69□□□□□ -0.06
RTN4-210ENST00000427710 REXO1L1PQ8IX06 675 aa14.69□□□□□ -0.06
RTN4-210ENST00000427710 KLHDC8BQ8IXV7 354 aa14.69□□□□□ -0.06
RTN4-210ENST00000427710 CACTIN-AS1Q8N1I8 211 aa14.69□□□□□ -0.06
RTN4-210ENST00000427710 TRIM58Q8NG06 486 aa14.69□□□□□ -0.06
RTN4-210ENST00000427710 NXPE2Q96DL1 559 aa14.69□□□□□ -0.06
RTN4-210ENST00000427710 GFM1Q96RP9 751 aaKnown RBP14.69□□□□□ -0.06
RTN4-210ENST00000427710 OSGEPL1Q9H4B0 414 aa14.69□□□□□ -0.06
RTN4-210ENST00000427710 FAM96AQ9H5X1 160 aa14.69□□□□□ -0.06
RTN4-210ENST00000427710 ETNK1Q9HBU6 452 aa14.69□□□□□ -0.06
RTN4-210ENST00000427710 KLC4Q9NSK0 619 aa14.69□□□□□ -0.06
RTN4-210ENST00000427710 TRMT1Q9NXH9 659 aaKnown RBP14.69□□□□□ -0.06
RTN4-210ENST00000427710 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.69□□□□□ -0.06
RTN4-210ENST00000427710 SATB2Q9UPW6 733 aa14.69□□□□□ -0.06
RTN4-210ENST00000427710 DNAJC16Q9Y2G8 782 aa14.69□□□□□ -0.06
RTN4-210ENST00000427710 AHCTF1Q8WYP5 2266 aa14.69□□□□□ -0.06
RTN4-210ENST00000427710 DSPP15924 2871 aaKnown RBP14.69□□□□□ -0.06
RTN4-210ENST00000427710 C2orf81A6NN90 581 aa14.68□□□□□ -0.06
RTN4-210ENST00000427710 TLX3O43711 291 aaPredicted RBP14.68□□□□□ -0.06
RTN4-210ENST00000427710 CDK14O94921 469 aa14.68□□□□□ -0.06
RTN4-210ENST00000427710 ALDH4A1P30038 563 aa14.68□□□□□ -0.06
RTN4-210ENST00000427710 KCNJ1P48048 391 aa14.68□□□□□ -0.06
RTN4-210ENST00000427710 GABREP78334 506 aa14.68□□□□□ -0.06
RTN4-210ENST00000427710 B4GALNT1Q00973 533 aa14.68□□□□□ -0.06
RTN4-210ENST00000427710 TMEM115Q12893 351 aaPredicted RBP14.68□□□□□ -0.06
RTN4-210ENST00000427710 SEPT6Q14141 434 aa14.68□□□□□ -0.06
RTN4-210ENST00000427710 RTP5Q14D33 572 aa14.68□□□□□ -0.06
RTN4-210ENST00000427710 NKAIN2Q5VXU1 208 aa14.68□□□□□ -0.06
RTN4-210ENST00000427710 PDPK2PQ6A1A2 396 aa14.68□□□□□ -0.06
RTN4-210ENST00000427710 USP53Q70EK8 1073 aa14.68□□□□□ -0.06
RTN4-210ENST00000427710 OR6C4Q8NGE1 309 aa14.68□□□□□ -0.06
RTN4-210ENST00000427710 BRSK1Q8TDC3 778 aa14.68□□□□□ -0.06
RTN4-210ENST00000427710 SLC37A2Q8TED4 501 aa14.68□□□□□ -0.06
RTN4-210ENST00000427710 RTP4Q96DX8 246 aa14.68□□□□□ -0.06
RTN4-210ENST00000427710 CCDC97Q96F63 343 aaPredicted RBP14.68□□□□□ -0.06
RTN4-210ENST00000427710 VPS35Q96QK1 796 aa14.68□□□□□ -0.06
RTN4-210ENST00000427710 NRSN2Q9GZP1 204 aa14.68□□□□□ -0.06
RTN4-210ENST00000427710 RMI1Q9H9A7 625 aa14.68□□□□□ -0.06
RTN4-210ENST00000427710 PRDM8Q9NQV8 689 aa14.68□□□□□ -0.06
RTN4-210ENST00000427710 APPL1Q9UKG1 709 aa14.68□□□□□ -0.06
RTN4-210ENST00000427710 D6RAR5 112 aa14.67□□□□□ -0.06
RTN4-210ENST00000427710 CHUKO15111 745 aa14.67□□□□□ -0.06
RTN4-210ENST00000427710 NUDT21O43809 227 aaKnown RBP14.67□□□□□ -0.06
RTN4-210ENST00000427710 TCEA3O75764 348 aa14.67□□□□□ -0.06
RTN4-210ENST00000427710 ZNF189O75820 626 aaPredicted RBP14.67□□□□□ -0.06
RTN4-210ENST00000427710 AP2A1O95782 977 aa14.67□□□□□ -0.06
RTN4-210ENST00000427710 PRSS56P0CW18 603 aa14.67□□□□□ -0.06
RTN4-210ENST00000427710 GRIA1P42261 906 aa14.67□□□□□ -0.06
RTN4-210ENST00000427710 ZNF140P52738 457 aaPredicted RBP14.67□□□□□ -0.06
RTN4-210ENST00000427710 CTSCP53634 463 aa14.67□□□□□ -0.06
RTN4-210ENST00000427710 LRP8Q14114 963 aa14.67□□□□□ -0.06
RTN4-210ENST00000427710 POU6F1Q14863 301 aa14.67□□□□□ -0.06
RTN4-210ENST00000427710 SEPT7Q16181 437 aaKnown RBP14.67□□□□□ -0.06
RTN4-210ENST00000427710 LONRF2Q1L5Z9 754 aa14.67□□□□□ -0.06
RTN4-210ENST00000427710 INSCQ1MX18 579 aa14.67□□□□□ -0.06
RTN4-210ENST00000427710 P3H1Q32P28 736 aa14.67□□□□□ -0.06
RTN4-210ENST00000427710 GPRC6AQ5T6X5 926 aa14.67□□□□□ -0.06
RTN4-210ENST00000427710 DET1Q7L5Y6 550 aa14.67□□□□□ -0.06
RTN4-210ENST00000427710 LRRTM4Q86VH4 590 aa14.67□□□□□ -0.06
RTN4-210ENST00000427710 TRAPPC5Q8IUR0 188 aa14.67□□□□□ -0.06
RTN4-210ENST00000427710 ZNF547Q8IVP9 402 aa14.67□□□□□ -0.06
RTN4-210ENST00000427710 OR52K1Q8NGK4 314 aa14.67□□□□□ -0.06
RTN4-210ENST00000427710 ZNF398Q8TD17 642 aa14.67□□□□□ -0.06
RTN4-210ENST00000427710 MS4A14Q96JA4 679 aa14.67□□□□□ -0.06
RTN4-210ENST00000427710 DNAJC1Q96KC8 554 aaKnown RBP14.67□□□□□ -0.06
RTN4-210ENST00000427710 DCBLD2Q96PD2 775 aa14.67□□□□□ -0.06
RTN4-210ENST00000427710 LRRC40Q9H9A6 602 aa14.67□□□□□ -0.06
RTN4-210ENST00000427710 RDH14Q9HBH5 336 aa14.67□□□□□ -0.06
RTN4-210ENST00000427710 EPB41L5Q9HCM4 733 aa14.67□□□□□ -0.06
RTN4-210ENST00000427710 SMARCAL1Q9NZC9 954 aa14.67□□□□□ -0.06
RTN4-210ENST00000427710 SCHIP1Q9P0W5 487 aaPredicted RBP14.67□□□□□ -0.06
RTN4-210ENST00000427710 PTPRQQ9UMZ3 2332 aa14.66□□□□□ -0.06
RTN4-210ENST00000427710 KMOO15229 486 aa14.66□□□□□ -0.06
RTN4-210ENST00000427710 LDB2O43679 373 aa14.66□□□□□ -0.06
RTN4-210ENST00000427710 VEGFDO43915 354 aa14.66□□□□□ -0.06
RTN4-210ENST00000427710 PRAMEF1O95521 474 aa14.66□□□□□ -0.06
RTN4-210ENST00000427710 CRTAMO95727 393 aa14.66□□□□□ -0.06
RTN4-210ENST00000427710 PNLIPP16233 465 aa14.66□□□□□ -0.06
RTN4-210ENST00000427710 ZNF7P17097 686 aaPredicted RBP14.66□□□□□ -0.06
RTN4-210ENST00000427710 PBLDP30039 288 aaPredicted RBP14.66□□□□□ -0.06
RTN4-210ENST00000427710 STIP1P31948 543 aaKnown RBP14.66□□□□□ -0.06
RTN4-210ENST00000427710 LMAN1P49257 510 aa14.66□□□□□ -0.06
RTN4-210ENST00000427710 CDKN1CP49918 316 aaPredicted RBP14.66□□□□□ -0.06
RTN4-210ENST00000427710 TERF1P54274 439 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms