RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 MLNP12872 115 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 TGM1P22735 817 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 ADRA1DP25100 572 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 NFKBIAP25963 317 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 ARNTP27540 789 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 CD38P28907 300 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 TRIM23P36406 574 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 NUDT1P36639 197 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 SPAM1P38567 509 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 MPLP40238 635 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 ELK3P41970 407 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 GPR1P46091 355 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 POLD2P49005 469 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 CARSP49589 748 aaKnown RBP5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 DRG2P55039 364 aaKnown RBP5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 ARL4CP56559 192 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 NXPH1P58417 271 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 PFN3P60673 137 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 RACK1P63244 317 aaKnown RBP5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 IRX4P78413 519 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 SARNPP82979 210 aaKnown RBP5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 ACVR1Q04771 509 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 DPTQ07507 201 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 SPEM2Q0P670 501 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 EIF2B5Q13144 721 aaKnown RBP5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 FZD2Q14332 565 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 SEMA3AQ14563 771 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 STAT4Q14765 748 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 NAA30Q147X3 362 aaPredicted RBP5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 SF3A2Q15428 464 aaKnown RBP5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 KIF19Q2TAC6 998 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 ATP13A5Q4VNC0 1218 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 KHDC1Q4VXA5 237 aaKnown RBP5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 GLE1Q53GS7 698 aaKnown RBP5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 ZNF542PQ5EBM4 170 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 TRIM61Q5EBN2 209 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 RAET1GQ6H3X3 334 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 ADAMTSL4Q6UY14 1074 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 KYAT3Q6YP21 454 aaKnown RBP5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 PTAR1Q7Z6K3 402 aaPredicted RBP5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 PCGF5Q86SE9 256 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 HEATR4Q86WZ0 1026 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 GSPT2Q8IYD1 628 aaKnown RBP5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 PIANPQ8IYJ0 282 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 NRSN1Q8IZ57 195 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 UNC5BQ8IZJ1 945 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 DENND6BQ8NEG7 585 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 PPHLN1Q8NEY8 458 aaKnown RBP5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 HDAC10Q969S8 669 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 MFSD3Q96ES6 412 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 STAMBPL1Q96FJ0 436 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 KLHDC7BQ96G42 594 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 CDKN2AIPNLQ96HQ2 116 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 LOXL4Q96JB6 756 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 SRPK1Q96SB4 655 aaKnown RBP5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 APOOQ9BUR5 198 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 KIFC1Q9BW19 673 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 TEX101Q9BY14 249 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 RAB17Q9H0T7 212 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 IRF2BPLQ9H1B7 796 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 TCEAL2Q9H3H9 227 aaPredicted RBP5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 ANKZF1Q9H8Y5 726 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 IL21RQ9HBE5 538 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 CAPN10Q9HC96 672 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 GDF3Q9NR23 364 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 GPR27Q9NS67 375 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 RXFP3Q9NSD7 469 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 TREX1Q9NSU2 369 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 MARCH4Q9P2E8 410 aaPredicted RBP5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 NFKBIL1Q9UBC1 381 aaPredicted RBP5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 RAB23Q9ULC3 237 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 SOX13Q9UN79 622 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 CHMP2BQ9UQN3 213 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 ANKRD6Q9Y2G4 727 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 TMEM98Q9Y2Y6 226 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 UTP11Q9Y3A2 253 aaKnown RBP5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 PKP3Q9Y446 797 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 PCDHGA11Q9Y5H2 935 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 PCYT1BQ9Y5K3 369 aaPredicted RBP5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 SNX11Q9Y5W9 270 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 MAD1L1Q9Y6D9 718 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 OAS3Q9Y6K5 1087 aaKnown RBP5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 ANKRD36A6QL64 1941 aa5.67□□□□□ -1.5
HERPUD2-204ENST00000426180 ABCA7Q8IZY2 2146 aa5.66□□□□□ -1.5
HERPUD2-204ENST00000426180 CACNA1HO95180 2353 aa5.66□□□□□ -1.5
HERPUD2-204ENST00000426180 MYLKQ15746 1914 aa5.66□□□□□ -1.5
HERPUD2-204ENST00000426180 DMDP11532 3685 aa5.66□□□□□ -1.5
HERPUD2-204ENST00000426180 KRTAP9-6A0A140TA67 174 aa5.66□□□□□ -1.5
HERPUD2-204ENST00000426180 ZCWPW2A0A1B0GU75 182 aa5.66□□□□□ -1.5
HERPUD2-204ENST00000426180 A6NNZ2 444 aa5.66□□□□□ -1.5
HERPUD2-204ENST00000426180 ADARB2-AS1A8MUL3 147 aa5.66□□□□□ -1.5
HERPUD2-204ENST00000426180 GOLGA8KD6RF30 607 aa5.66□□□□□ -1.5
HERPUD2-204ENST00000426180 E7ESA3 106 aa5.66□□□□□ -1.5
HERPUD2-204ENST00000426180 GOLGA8TH3BQL2 631 aa5.66□□□□□ -1.5
HERPUD2-204ENST00000426180 M0R082 166 aa5.66□□□□□ -1.5
HERPUD2-204ENST00000426180 TLR4O00206 839 aa5.66□□□□□ -1.5
HERPUD2-204ENST00000426180 VILLO15195 856 aa5.66□□□□□ -1.5
HERPUD2-204ENST00000426180 PPFIA2O75334 1257 aa5.66□□□□□ -1.5
HERPUD2-204ENST00000426180 SRP72O76094 671 aaKnown RBP5.66□□□□□ -1.5
HERPUD2-204ENST00000426180 VAPBO95292 243 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms