RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 UGT1A10Q9HAW8 530 aa17.62■□□□□ 0.41
SBDSP1-202ENST00000423945 UGT1A8Q9HAW9 530 aa17.62■□□□□ 0.41
SBDSP1-202ENST00000423945 KCTD3Q9Y597 815 aa17.62■□□□□ 0.41
SBDSP1-202ENST00000423945 PCDHGA8Q9Y5G5 932 aa17.62■□□□□ 0.41
SBDSP1-202ENST00000423945 ARL5AQ9Y689 179 aa17.62■□□□□ 0.41
SBDSP1-202ENST00000423945 CACNA1GO43497 2377 aa17.62■□□□□ 0.41
SBDSP1-202ENST00000423945 CCDC187A0A096LP49 1063 aa17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 GOLGA6L9A6NEM1 432 aa17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 RHPN2P1A8MT19 583 aa17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 STK10O94804 968 aaKnown RBP17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 CD1CP29017 333 aa17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 CCKBRP32239 447 aa17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 ACTN2P35609 894 aa17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 SPAM1P38567 509 aa17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 FASLGP48023 281 aa17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 CLCNKAP51800 687 aa17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 INHBCP55103 352 aa17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 CFHR1Q03591 330 aa17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 PEX6Q13608 980 aa17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 SPARCL1Q14515 664 aa17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 MEI1Q5TIA1 1274 aa17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 CRTC3Q6UUV7 619 aa17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 ZNF574Q6ZN55 896 aaPredicted RBP17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 ZNF662Q6ZS27 426 aa17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 C11orf96Q7Z7L8 435 aa17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 CCDC112Q8NEF3 446 aa17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 WDR36Q8NI36 951 aaKnown RBP17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 ZNF578Q96N58 590 aaPredicted RBP17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 SLC46A1Q96NT5 459 aa17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 FERMT1Q9BQL6 677 aa17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 NUDT22Q9BRQ3 303 aa17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 TMEM121Q9BTD3 319 aa17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 RDH14Q9HBH5 336 aa17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 EPB41L5Q9HCM4 733 aa17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 AAR2Q9Y312 384 aaKnown RBP17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 PTPRQQ9UMZ3 2332 aa17.61■□□□□ 0.41
SBDSP1-202ENST00000423945 ATRXP46100 2492 aa17.6■□□□□ 0.41
SBDSP1-202ENST00000423945 CDRT15L2A8MXV6 281 aa17.6■□□□□ 0.41
SBDSP1-202ENST00000423945 GPR89AB7ZAQ6 455 aa17.6■□□□□ 0.41
SBDSP1-202ENST00000423945 GPR89BP0CG08 455 aa17.6■□□□□ 0.41
SBDSP1-202ENST00000423945 ALDH4A1P30038 563 aa17.6■□□□□ 0.41
SBDSP1-202ENST00000423945 TNNT3P45378 269 aaPredicted RBP17.6■□□□□ 0.41
SBDSP1-202ENST00000423945 PRPSAP1Q14558 356 aa17.6■□□□□ 0.41
SBDSP1-202ENST00000423945 PLA2G4EQ3MJ16 856 aa17.6■□□□□ 0.41
SBDSP1-202ENST00000423945 AMZ1Q400G9 498 aa17.6■□□□□ 0.41
SBDSP1-202ENST00000423945 IYDQ6PHW0 289 aa17.6■□□□□ 0.41
SBDSP1-202ENST00000423945 FAM151BQ6UXP7 276 aa17.6■□□□□ 0.41
SBDSP1-202ENST00000423945 MICALCLQ6ZW33 695 aa17.6■□□□□ 0.41
SBDSP1-202ENST00000423945 ZNF761Q86XN6 746 aaPredicted RBP17.6■□□□□ 0.41
SBDSP1-202ENST00000423945 LSMEM2Q8N112 164 aa17.6■□□□□ 0.41
SBDSP1-202ENST00000423945 TBL1YQ9BQ87 522 aa17.6■□□□□ 0.41
SBDSP1-202ENST00000423945 SEMA6CQ9H3T2 930 aa17.6■□□□□ 0.41
SBDSP1-202ENST00000423945 ARNT2Q9HBZ2 717 aa17.6■□□□□ 0.41
SBDSP1-202ENST00000423945 LZTFL1Q9NQ48 299 aa17.6■□□□□ 0.41
SBDSP1-202ENST00000423945 KLC4Q9NSK0 619 aa17.6■□□□□ 0.41
SBDSP1-202ENST00000423945 SCHIP1Q9P0W5 487 aaPredicted RBP17.6■□□□□ 0.41
SBDSP1-202ENST00000423945 LHX6Q9UPM6 363 aa17.6■□□□□ 0.41
SBDSP1-202ENST00000423945 IGHV1OR21-1A0A087WYE8 117 aa17.59■□□□□ 0.41
SBDSP1-202ENST00000423945 GLYATL1P3A0A0U1RQE8 302 aa17.59■□□□□ 0.41
SBDSP1-202ENST00000423945 VEGFDO43915 354 aa17.59■□□□□ 0.41
SBDSP1-202ENST00000423945 HGFP14210 728 aa17.59■□□□□ 0.41
SBDSP1-202ENST00000423945 ZNF7P17097 686 aaPredicted RBP17.59■□□□□ 0.41
SBDSP1-202ENST00000423945 CSF2RBP32927 897 aa17.59■□□□□ 0.41
SBDSP1-202ENST00000423945 GPR3P46089 330 aa17.59■□□□□ 0.41
SBDSP1-202ENST00000423945 ERVPABLB-1P60509 514 aa17.59■□□□□ 0.41
SBDSP1-202ENST00000423945 TMEM115Q12893 351 aaPredicted RBP17.59■□□□□ 0.41
SBDSP1-202ENST00000423945 TAF1AQ15573 450 aaPredicted RBP17.59■□□□□ 0.41
SBDSP1-202ENST00000423945 OASLQ15646 514 aaKnown RBP17.59■□□□□ 0.41
SBDSP1-202ENST00000423945 PARP6Q2NL67 630 aa17.59■□□□□ 0.41
SBDSP1-202ENST00000423945 NKAIN2Q5VXU1 208 aa17.59■□□□□ 0.41
SBDSP1-202ENST00000423945 FOXR1Q6PIV2 292 aa17.59■□□□□ 0.41
SBDSP1-202ENST00000423945 USP53Q70EK8 1073 aa17.59■□□□□ 0.41
SBDSP1-202ENST00000423945 LRRTM4Q86VH4 590 aa17.59■□□□□ 0.41
SBDSP1-202ENST00000423945 SLC13A5Q86YT5 568 aaPredicted RBP17.59■□□□□ 0.41
SBDSP1-202ENST00000423945 RTP4Q96DX8 246 aa17.59■□□□□ 0.41
SBDSP1-202ENST00000423945 TMEM74Q96NL1 305 aa17.59■□□□□ 0.41
SBDSP1-202ENST00000423945 PRDM8Q9NQV8 689 aa17.59■□□□□ 0.41
SBDSP1-202ENST00000423945 FKBPLQ9UIM3 349 aa17.59■□□□□ 0.41
SBDSP1-202ENST00000423945 LOC400499M0QZD8 3231 aa17.59■□□□□ 0.41
SBDSP1-202ENST00000423945 PLD2O14939 933 aa17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 KMOO15229 486 aa17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 STX7O15400 261 aaKnown RBP17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 LIASO43766 372 aa17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 SNX2O60749 519 aa17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 PPFIA2O75334 1257 aa17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 CDK14O94921 469 aa17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 CPNE6O95741 557 aa17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 PTMAP06454 111 aaKnown RBP17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 CCDC175P0C221 793 aa17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 F3P13726 295 aa17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 HOXB3P14651 431 aaPredicted RBP17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 LPOP22079 712 aaPredicted RBP17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 CTSCP53634 463 aa17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 XIAPP98170 497 aa17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 CCDC173Q0VFZ6 552 aa17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 SQSTM1Q13501 440 aa17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 C16orf72Q14CZ0 275 aa17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 SIX1Q15475 284 aaPredicted RBP17.58■□□□□ 0.4
SBDSP1-202ENST00000423945 GPRC6AQ5T6X5 926 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms