RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 NRSN2Q9GZP1 204 aa10.82□□□□□ -0.68
USP49-204ENST00000423567 STN1Q9H668 368 aaKnown RBP10.82□□□□□ -0.68
USP49-204ENST00000423567 ARNT2Q9HBZ2 717 aa10.82□□□□□ -0.68
USP49-204ENST00000423567 ARFGAP3Q9NP61 516 aa10.82□□□□□ -0.68
USP49-204ENST00000423567 IL26Q9NPH9 171 aa10.82□□□□□ -0.68
USP49-204ENST00000423567 PAK5Q9P286 719 aa10.82□□□□□ -0.68
USP49-204ENST00000423567 PRKAB1Q9Y478 270 aa10.82□□□□□ -0.68
USP49-204ENST00000423567 PLEKHM1Q9Y4G2 1056 aa10.82□□□□□ -0.68
USP49-204ENST00000423567 ARL5AQ9Y689 179 aa10.82□□□□□ -0.68
USP49-204ENST00000423567 ARID1BQ8NFD5 2236 aaPredicted RBP10.82□□□□□ -0.68
USP49-204ENST00000423567 ACACBO00763 2458 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 CEP295Q9C0D2 2601 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 TMX2-CTNND1H3BSU7 103 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 KMOO15229 486 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 PRAMEF1O95521 474 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 ECEL1O95672 775 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 MSH3P20585 1137 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 CXCR5P32302 372 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 HADHAP40939 763 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 PPM1FP49593 454 aaPredicted RBP10.81□□□□□ -0.68
USP49-204ENST00000423567 MAZP56270 477 aaKnown RBP10.81□□□□□ -0.68
USP49-204ENST00000423567 CYP4F3Q08477 520 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 SEPT6Q14141 434 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 ISXQ2M1V0 245 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 ZNF648Q5T619 568 aaPredicted RBP10.81□□□□□ -0.68
USP49-204ENST00000423567 KCTD11Q693B1 232 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 DRICH1Q6PGQ1 229 aaPredicted RBP10.81□□□□□ -0.68
USP49-204ENST00000423567 CRTC3Q6UUV7 619 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 C4orf22Q6V702 233 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 PPP1R21Q6ZMI0 780 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 ADGRG6Q86SQ4 1221 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 LRRTM4Q86VH4 590 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 TRAPPC5Q8IUR0 188 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 CCNJLQ8IV13 435 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 KLHDC8BQ8IXV7 354 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 NAGSQ8N159 534 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 ARL14Q8N4G2 192 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 DNAAF3Q8N9W5 541 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 AVL9Q8NBF6 648 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 MDM1Q8TC05 714 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 ZNF398Q8TD17 642 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 ULK4Q96C45 1275 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 PBKQ96KB5 322 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 NAP1L3Q99457 506 aaPredicted RBP10.81□□□□□ -0.68
USP49-204ENST00000423567 C19orf43Q9BQ61 176 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 ZMYND15Q9H091 742 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 LRRN3Q9H3W5 708 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 OSGEPL1Q9H4B0 414 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 NPDC1Q9NQX5 325 aaPredicted RBP10.81□□□□□ -0.68
USP49-204ENST00000423567 KLC4Q9NSK0 619 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 KCNK6Q9Y257 313 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 DRG1Q9Y295 367 aaKnown RBP10.81□□□□□ -0.68
USP49-204ENST00000423567 RNF215Q9Y6U7 377 aa10.81□□□□□ -0.68
USP49-204ENST00000423567 TPRP12270 2363 aaKnown RBP10.81□□□□□ -0.68
USP49-204ENST00000423567 OR5K4A6NMS3 321 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 CHUKO15111 745 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 UGT1A9O60656 530 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 SNX2O60749 519 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 MTX2O75431 263 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 RALBP11234 206 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 ZNF7P17097 686 aaPredicted RBP10.8□□□□□ -0.68
USP49-204ENST00000423567 UGT1A6P19224 532 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 ITGALP20701 1170 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 UGT1A1P22309 533 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 UGT1A4P22310 534 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 ALDH4A1P30038 563 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 AKT1P31749 480 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 UGT1A3P35503 534 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 UGT1A5P35504 534 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 CLCNKAP51800 687 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 CCL7P80098 99 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 TMPRSS15P98073 1019 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 CDH17Q12864 832 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 TMEM115Q12893 351 aaPredicted RBP10.8□□□□□ -0.68
USP49-204ENST00000423567 LAMB3Q13751 1172 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 PLA2G4EQ3MJ16 856 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 DENND5AQ6IQ26 1287 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 SPRED1Q7Z699 444 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 C17orf82Q86X59 251 aaPredicted RBP10.8□□□□□ -0.68
USP49-204ENST00000423567 LSMEM2Q8N112 164 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 DDHD1Q8NEL9 900 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 SH3KBP1Q96B97 665 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 DCUN1D1Q96GG9 259 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 ZNF514Q96K75 400 aaPredicted RBP10.8□□□□□ -0.68
USP49-204ENST00000423567 TMEM74Q96NL1 305 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 TIMM29Q9BSF4 260 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 STRADBQ9C0K7 418 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 ASB8Q9H765 288 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 UGT1A7Q9HAW7 530 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 UGT1A10Q9HAW8 530 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 UGT1A8Q9HAW9 530 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 ETNK1Q9HBU6 452 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 RAB6BQ9NRW1 208 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 SMOXQ9NWM0 555 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 TRMT1Q9NXH9 659 aaKnown RBP10.8□□□□□ -0.68
USP49-204ENST00000423567 DKK4Q9UBT3 224 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 FKBPLQ9UIM3 349 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 CRLS1Q9UJA2 301 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 ZMIZ1Q9ULJ6 1067 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 DNAJC16Q9Y2G8 782 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms