RNA–Protein interactions for RNA: ENST00000421922.6

CCDC28B-202, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 1 (best) BASIC

Gene CCDC28B, Length 1,415 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-202ENST00000421922 PPARDQ03181 441 aa16.97■□□□□ 0.31
CCDC28B-202ENST00000421922 GPRC6AQ5T6X5 926 aa16.97■□□□□ 0.31
CCDC28B-202ENST00000421922 HHATQ5VTY9 493 aa16.97■□□□□ 0.31
CCDC28B-202ENST00000421922 UGT3A1Q6NUS8 523 aa16.97■□□□□ 0.31
CCDC28B-202ENST00000421922 NEK5Q6P3R8 708 aa16.97■□□□□ 0.31
CCDC28B-202ENST00000421922 GLYATL1Q969I3 302 aa16.97■□□□□ 0.31
CCDC28B-202ENST00000421922 VPS35Q96QK1 796 aa16.97■□□□□ 0.31
CCDC28B-202ENST00000421922 HHIPQ96QV1 700 aa16.97■□□□□ 0.31
CCDC28B-202ENST00000421922 PAIP2Q9BPZ3 127 aaKnown RBP16.97■□□□□ 0.31
CCDC28B-202ENST00000421922 TSSK1BQ9BXA7 367 aa16.97■□□□□ 0.31
CCDC28B-202ENST00000421922 KDM4CQ9H3R0 1056 aa16.97■□□□□ 0.31
CCDC28B-202ENST00000421922 GPAMQ9HCL2 828 aa16.97■□□□□ 0.31
CCDC28B-202ENST00000421922 TRMT6Q9UJA5 497 aaKnown RBP16.97■□□□□ 0.31
CCDC28B-202ENST00000421922 ACOT9Q9Y305 439 aa16.97■□□□□ 0.31
CCDC28B-202ENST00000421922 PIEZO1Q92508 2521 aa16.97■□□□□ 0.31
CCDC28B-202ENST00000421922 A0A1W2PQU0 124 aa16.96■□□□□ 0.31
CCDC28B-202ENST00000421922 AGAP14A8MT82 685 aa16.96■□□□□ 0.31
CCDC28B-202ENST00000421922 SLC25A14O95258 325 aaPredicted RBP16.96■□□□□ 0.31
CCDC28B-202ENST00000421922 PCCBP05166 539 aa16.96■□□□□ 0.31
CCDC28B-202ENST00000421922 C2P06681 752 aa16.96■□□□□ 0.31
CCDC28B-202ENST00000421922 GSTA1P08263 222 aa16.96■□□□□ 0.31
CCDC28B-202ENST00000421922 CHN1P15882 459 aa16.96■□□□□ 0.31
CCDC28B-202ENST00000421922 FDXRP22570 491 aa16.96■□□□□ 0.31
CCDC28B-202ENST00000421922 CRHR1P34998 444 aa16.96■□□□□ 0.31
CCDC28B-202ENST00000421922 MAGEA12P43365 314 aa16.96■□□□□ 0.31
CCDC28B-202ENST00000421922 TPMTP51580 245 aa16.96■□□□□ 0.31
CCDC28B-202ENST00000421922 CREB5Q02930 508 aa16.96■□□□□ 0.31
CCDC28B-202ENST00000421922 DPTQ07507 201 aa16.96■□□□□ 0.31
CCDC28B-202ENST00000421922 PDE1CQ14123 709 aaPredicted RBP16.96■□□□□ 0.31
CCDC28B-202ENST00000421922 CCDC63Q8NA47 563 aa16.96■□□□□ 0.31
CCDC28B-202ENST00000421922 ACVR1CQ8NER5 493 aa16.96■□□□□ 0.31
CCDC28B-202ENST00000421922 BTN2A2Q8WVV5 523 aa16.96■□□□□ 0.31
CCDC28B-202ENST00000421922 POPDC3Q9HBV1 291 aa16.96■□□□□ 0.31
CCDC28B-202ENST00000421922 SGK2Q9HBY8 427 aa16.96■□□□□ 0.31
CCDC28B-202ENST00000421922 C11orf16Q9NQ32 467 aa16.96■□□□□ 0.31
CCDC28B-202ENST00000421922 GRID1Q9ULK0 1009 aa16.96■□□□□ 0.31
CCDC28B-202ENST00000421922 SIT1Q9Y3P8 196 aa16.96■□□□□ 0.31
CCDC28B-202ENST00000421922 HCN4Q9Y3Q4 1203 aa16.96■□□□□ 0.31
CCDC28B-202ENST00000421922 FADS2P1A8MWK0 482 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 QSOX1O00391 747 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 INPP4BO15327 924 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 TYROBPO43914 113 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 APBB3O95704 486 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 OR56A5P0C7T3 313 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 GM2AP17900 193 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 OXTRP30559 389 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 RPA3P35244 121 aaPredicted RBP16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 SLC18A1P54219 525 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 GYS2P54840 703 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 CDKN2DP55273 166 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 ZXDAP98168 799 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 GTF2H3Q13889 308 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 LRRC14Q15048 493 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 ZKSCAN8Q15776 578 aaPredicted RBP16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 INSCQ1MX18 579 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 TSNAXIP1Q2TAA8 658 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 PPM1JQ5JR12 505 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 SEL1L3Q68CR1 1132 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 KLC3Q6P597 504 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 ZNF549Q6P9A3 640 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 LCA5Q86VQ0 697 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 NLRP8Q86W28 1048 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 HORMAD1Q86X24 394 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 DDHD1Q8NEL9 900 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 OR2T34Q8NGX1 318 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 TCP10LQ8TDR4 215 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 KCNJ9Q92806 393 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 FAM131CQ96AQ9 280 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 SCYL1Q96KG9 808 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 PANX3Q96QZ0 392 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 OLFM1Q99784 485 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 BOCQ9BWV1 1114 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 CHRDQ9H2X0 955 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 SYTL2Q9HCH5 934 aa16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 SARS2Q9NP81 518 aaKnown RBP16.96■□□□□ 0.3
CCDC28B-202ENST00000421922 MUC6Q6W4X9 2439 aa16.95■□□□□ 0.3
CCDC28B-202ENST00000421922 SLC35E2BP0CK96 405 aa16.95■□□□□ 0.3
CCDC28B-202ENST00000421922 NEFHP12036 1026 aa16.95■□□□□ 0.3
CCDC28B-202ENST00000421922 COL6A2P12110 1019 aa16.95■□□□□ 0.3
CCDC28B-202ENST00000421922 RPS9P46781 194 aaKnown RBP16.95■□□□□ 0.3
CCDC28B-202ENST00000421922 ZNF460Q14592 562 aa16.95■□□□□ 0.3
CCDC28B-202ENST00000421922 FAM83EQ2M2I3 478 aa16.95■□□□□ 0.3
CCDC28B-202ENST00000421922 MAP7D1Q3KQU3 841 aa16.95■□□□□ 0.3
CCDC28B-202ENST00000421922 TMEM31Q5JXX7 168 aa16.95■□□□□ 0.3
CCDC28B-202ENST00000421922 CTSL3PQ5NE16 218 aa16.95■□□□□ 0.3
CCDC28B-202ENST00000421922 CEP97Q8IW35 865 aa16.95■□□□□ 0.3
CCDC28B-202ENST00000421922 SPEM1Q8N4L4 309 aa16.95■□□□□ 0.3
CCDC28B-202ENST00000421922 MDM1Q8TC05 714 aa16.95■□□□□ 0.3
CCDC28B-202ENST00000421922 FAM136AQ96C01 138 aa16.95■□□□□ 0.3
CCDC28B-202ENST00000421922 FAM111AQ96PZ2 611 aa16.95■□□□□ 0.3
CCDC28B-202ENST00000421922 IER2Q9BTL4 223 aa16.95■□□□□ 0.3
CCDC28B-202ENST00000421922 P2RY12Q9H244 342 aa16.95■□□□□ 0.3
CCDC28B-202ENST00000421922 MID2Q9UJV3 735 aa16.95■□□□□ 0.3
CCDC28B-202ENST00000421922 CYP8B1Q9UNU6 501 aa16.95■□□□□ 0.3
CCDC28B-202ENST00000421922 PIKFYVEQ9Y2I7 2098 aa16.94■□□□□ 0.3
CCDC28B-202ENST00000421922 A6NNZ2 444 aa16.94■□□□□ 0.3
CCDC28B-202ENST00000421922 NIPSNAP2O75323 286 aa16.94■□□□□ 0.3
CCDC28B-202ENST00000421922 ZNF217O75362 1048 aa16.94■□□□□ 0.3
CCDC28B-202ENST00000421922 AP2A2O94973 939 aa16.94■□□□□ 0.3
CCDC28B-202ENST00000421922 SEMA4FO95754 770 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms