RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 GFM2Q969S9 779 aaKnown RBP10.66□□□□□ -0.7
PTCH1-206ENST00000421141 NSMCE2Q96MF7 247 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 TUBGCP5Q96RT8 1024 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 ZNF607Q96SK3 696 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 CCM2Q9BSQ5 444 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 SLC32A1Q9H598 525 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 IL1RAPL1Q9NZN1 696 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 CROTQ9UKG9 612 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 CDC14AQ9UNH5 594 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 COL11A2P13942 1736 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-206ENST00000421141 OR1F1O43749 312 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 ESR1P03372 595 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 VAV1P15498 845 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 NAE1Q13564 534 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 KBTBD6Q86V97 674 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 RAD51AP1Q96B01 352 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 PPCDCQ96CD2 204 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 C1orf74Q96LT6 269 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 ZMAT2Q96NC0 199 aaKnown RBP10.66□□□□□ -0.7
PTCH1-206ENST00000421141 TTYH3Q9C0H2 523 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 VRTNQ9H8Y1 702 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 CD48P09326 243 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 CCR8P51685 355 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 CCNHP51946 323 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-206ENST00000421141 ATXN1P54253 815 aaKnown RBP10.66□□□□□ -0.7
PTCH1-206ENST00000421141 DSG1Q02413 1049 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 C22orf39Q6P5X5 142 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 ARCQ7LC44 396 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 CDYL2Q8N8U2 506 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 ZNF75CPQ92670 426 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-206ENST00000421141 RBM18Q96H35 190 aaKnown RBP10.66□□□□□ -0.7
PTCH1-206ENST00000421141 TBATAQ96M53 351 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 ROGDIQ9GZN7 287 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 ARL5AQ9Y689 179 aa10.66□□□□□ -0.7
PTCH1-206ENST00000421141 ADAMTS3O15072 1205 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 AP5Z1O43299 807 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 LILRB3O75022 631 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 LCA5LO95447 670 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 IDO1P14902 403 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 HNMTP50135 292 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 ERFP50548 548 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 GPR33Q49SQ1 333 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 MED27Q6P2C8 311 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 MTDHQ86UE4 582 aaKnown RBP10.65□□□□□ -0.7
PTCH1-206ENST00000421141 LRRC34Q8IZ02 419 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 TMEM209Q96SK2 561 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 TMEM248Q9NWD8 314 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 QSER1Q2KHR3 1735 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 PDE9AO76083 593 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 SRSF11Q05519 484 aaKnown RBP10.65□□□□□ -0.7
PTCH1-206ENST00000421141 C16orf46Q6P387 395 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 OLFML1Q6UWY5 402 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 ADGRG2Q8IZP9 1017 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 OR4A15Q8NGL6 344 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 LRIG1Q96JA1 1093 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 CRTAC1Q9NQ79 661 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 NUDT4Q9NZJ9 180 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 KIAA1551Q9HCM1 1747 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 PRR5-ARHGAP8B1AHC4 643 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 PI15O43692 258 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 RPL38P63173 70 aaKnown RBP10.65□□□□□ -0.7
PTCH1-206ENST00000421141 RING1Q06587 406 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 ELAVL3Q14576 367 aaKnown RBP10.65□□□□□ -0.7
PTCH1-206ENST00000421141 DEPDC1Q5TB30 811 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 SULT1C3Q6IMI6 304 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 KCTD4Q8WVF5 259 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 ARHGAP9Q9BRR9 750 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 SLC25A23Q9BV35 468 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 ADAM7Q9H2U9 754 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 B3GALT2O43825 422 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 MATN4O95460 622 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 IRX1P78414 480 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-206ENST00000421141 MRPL10Q7Z7H8 261 aaKnown RBP10.65□□□□□ -0.7
PTCH1-206ENST00000421141 AADATQ8N5Z0 425 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 MAPK15Q8TD08 544 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 ZNF641Q96N77 438 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-206ENST00000421141 TRMOQ9BU70 441 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 LIMD1Q9UGP4 676 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 RPS6KA6Q9UK32 745 aa10.65□□□□□ -0.7
PTCH1-206ENST00000421141 BIRC5O15392 142 aa10.65□□□□□ -0.71
PTCH1-206ENST00000421141 FFAR2O15552 330 aa10.65□□□□□ -0.71
PTCH1-206ENST00000421141 FYNP06241 537 aa10.65□□□□□ -0.71
PTCH1-206ENST00000421141 TAS2R50P59544 299 aa10.65□□□□□ -0.71
PTCH1-206ENST00000421141 ELOCQ15369 112 aa10.65□□□□□ -0.71
PTCH1-206ENST00000421141 ZNF805Q5CZA5 627 aa10.65□□□□□ -0.71
PTCH1-206ENST00000421141 HGSNATQ68CP4 663 aa10.65□□□□□ -0.71
PTCH1-206ENST00000421141 ZCCHC23Q6ZST2 131 aa10.65□□□□□ -0.71
PTCH1-206ENST00000421141 RPAINQ86UA6 219 aa10.65□□□□□ -0.71
PTCH1-206ENST00000421141 ZC3H7AQ8IWR0 971 aaKnown RBP10.65□□□□□ -0.71
PTCH1-206ENST00000421141 ST13P5Q8NFI4 369 aaPredicted RBP10.65□□□□□ -0.71
PTCH1-206ENST00000421141 ITCHQ96J02 903 aa10.65□□□□□ -0.71
PTCH1-206ENST00000421141 GPR21Q99679 349 aa10.65□□□□□ -0.71
PTCH1-206ENST00000421141 ZNF490Q9ULM2 529 aaPredicted RBP10.65□□□□□ -0.71
PTCH1-206ENST00000421141 PCDHB3Q9Y5E6 796 aa10.65□□□□□ -0.71
PTCH1-206ENST00000421141 MMP20O60882 483 aa10.65□□□□□ -0.71
PTCH1-206ENST00000421141 LATS1O95835 1130 aa10.65□□□□□ -0.71
PTCH1-206ENST00000421141 COL6A2P12110 1019 aa10.65□□□□□ -0.71
PTCH1-206ENST00000421141 CTSOP43234 321 aaPredicted RBP10.65□□□□□ -0.71
PTCH1-206ENST00000421141 ZNF844Q08AG5 666 aa10.65□□□□□ -0.71
PTCH1-206ENST00000421141 SLC13A2Q13183 592 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms