RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 CPXM1Q96SM3 734 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 SLC39A8Q9C0K1 460 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 ATP13A3Q9H7F0 1226 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 SGK2Q9HBY8 427 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 SEC14L3Q9UDX4 400 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 FRMPD1Q5SYB0 1578 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 FAM86C2PA6NEL3 165 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 EI24O14681 340 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 PRMT5O14744 637 aaPredicted RBP12.27□□□□□ -0.45
CLCN4-203ENST00000421085 SCAMP3O14828 347 aaKnown RBP12.27□□□□□ -0.45
CLCN4-203ENST00000421085 CD48P09326 243 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 POLR2EP19388 210 aaKnown RBP12.27□□□□□ -0.45
CLCN4-203ENST00000421085 CEBPGP53567 150 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 ZBED5Q49AG3 693 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 RBFAQ8N0V3 343 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 GTPBP3Q969Y2 492 aaKnown RBP12.27□□□□□ -0.45
CLCN4-203ENST00000421085 KCTD15Q96SI1 283 aaPredicted RBP12.27□□□□□ -0.45
CLCN4-203ENST00000421085 TTYH3Q9C0H2 523 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 C11orf16Q9NQ32 467 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 INTS10Q9NVR2 710 aaKnown RBP12.27□□□□□ -0.45
CLCN4-203ENST00000421085 MPZL2O60487 215 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 IFNA16P05015 189 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 POU2F1P14859 743 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 DPEP1P16444 411 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 OAZ1P54368 228 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 CDH15P55291 814 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 SLC9B1Q4ZJI4 515 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 FNDC3BQ53EP0 1204 aaKnown RBP12.27□□□□□ -0.45
CLCN4-203ENST00000421085 ZFPM1Q8IX07 1006 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 IRF2BPLQ9H1B7 796 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 PLK2Q9NYY3 685 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 OR10H1Q9Y4A9 318 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 TOP3BO95985 862 aaKnown RBP12.27□□□□□ -0.45
CLCN4-203ENST00000421085 PRKAR2AP13861 404 aaKnown RBP12.27□□□□□ -0.45
CLCN4-203ENST00000421085 ITPKAP23677 461 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 RHBDF2Q6PJF5 856 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 USP30Q70CQ3 517 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 LMAN2LQ9H0V9 348 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 TMLHEQ9NVH6 421 aa12.27□□□□□ -0.45
CLCN4-203ENST00000421085 OR6C70A6NIJ9 312 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 LRCH4O75427 683 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 UBA1P22314 1058 aaKnown RBP12.26□□□□□ -0.45
CLCN4-203ENST00000421085 FCGRTP55899 365 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 TCEAL5Q5H9L2 206 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 GCNT6Q5T4J0 391 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 RIOX2Q8IUF8 465 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 IQCF2Q8IXL9 164 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 CLIP3Q96DZ5 547 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 MFSD3Q96ES6 412 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 PPIEQ9UNP9 301 aaKnown RBP12.26□□□□□ -0.45
CLCN4-203ENST00000421085 TLL2Q9Y6L7 1015 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 OR10H2O60403 315 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 CD36P16671 472 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 CDH5P33151 784 aaPredicted RBP12.26□□□□□ -0.45
CLCN4-203ENST00000421085 SCNN1GP51170 649 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 ALDH3A2P51648 485 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 WDR4P57081 412 aaKnown RBP12.26□□□□□ -0.45
CLCN4-203ENST00000421085 AP3S2P59780 193 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 GRB14Q14449 540 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 POM121L1PQ3SYA9 428 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 LDB1Q86U70 411 aaPredicted RBP12.26□□□□□ -0.45
CLCN4-203ENST00000421085 SPACA7Q96KW9 195 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 MCMBPQ9BTE3 642 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 DNMT3LQ9UJW3 386 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 AGO1Q9UL18 857 aaKnown RBP12.26□□□□□ -0.45
CLCN4-203ENST00000421085 TESMINQ9Y4I5 508 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 PIP5K1BO14986 540 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 SLC22A1O15245 554 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 RPP40O75818 363 aaKnown RBP12.26□□□□□ -0.45
CLCN4-203ENST00000421085 CHRM5P08912 532 aaPredicted RBP12.26□□□□□ -0.45
CLCN4-203ENST00000421085 RORCP51449 518 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 CDH12P55289 794 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 ACAP2Q15057 778 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 DCST1Q5T197 706 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 FAM92BQ6ZTR7 304 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 ING5Q8WYH8 240 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 SDCBP2Q9H190 292 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 MAP4K5Q9Y4K4 846 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 J3QRK9 145 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 CXCR6O00574 342 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 ACSL4O60488 711 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 MAFO75444 373 aaPredicted RBP12.26□□□□□ -0.45
CLCN4-203ENST00000421085 LGALS2P05162 132 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 TUFMP49411 452 aaKnown RBP12.26□□□□□ -0.45
CLCN4-203ENST00000421085 PCDH1Q08174 1060 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 PTP4A2Q12974 167 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 ZBTB6Q15916 424 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 CCSAPQ6IQ19 270 aaPredicted RBP12.26□□□□□ -0.45
CLCN4-203ENST00000421085 AZIN2Q96A70 460 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 FBXL8Q96CD0 374 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 TBC1D17Q9HA65 648 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 MAN2B2Q9Y2E5 1009 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 CCNDBP1O95273 360 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 UROSP10746 265 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 SLC7A1P30825 629 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 SKP1P63208 163 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 ZDHHC24Q6UX98 284 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 ZDHHC21Q8IVQ6 265 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 TNFRSF25Q93038 417 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 ZNF354BQ96LW1 612 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms