RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 ANKRD20A2Q5SQ80 823 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 ANKRD20A1Q5TYW2 823 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 ANKRD20A3Q5VUR7 823 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 SPECC1LQ69YQ0 1117 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 THOC7Q6I9Y2 204 aaKnown RBP3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 FBXL22Q6P050 247 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 KLC3Q6P597 504 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 OLFM4Q6UX06 510 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 CCNI2Q6ZMN8 369 aaPredicted RBP3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 CCDC129Q6ZRS4 1044 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 BBS12Q6ZW61 710 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 RUFY3Q7L099 469 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 MON1BQ7L1V2 547 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 LRRC8DQ7L1W4 858 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 ADGRG6Q86SQ4 1221 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 ZNF554Q86TJ5 538 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 TMEM110Q86TL2 294 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 LRRTM4Q86VH4 590 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 TMPRSS12Q86WS5 348 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 ERICH1Q86X53 443 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 TMEM139Q8IV31 216 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 PEX5LQ8IYB4 626 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 KIRREL3Q8IZU9 778 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 CNBD1Q8NA66 436 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 TEX45Q8NA69 505 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 AENQ8WTP8 325 aaKnown RBP3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 TMEM255BQ8WV15 326 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 RAB40AQ8WXH6 277 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 IFT81Q8WYA0 676 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 IRGQQ8WZA9 623 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 MRPS27Q92552 414 aaKnown RBP3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 ATOH1Q92858 354 aaPredicted RBP3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 USP13Q92995 863 aaPredicted RBP3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 SLC35B4Q969S0 331 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 TMEM18Q96B42 140 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 RNF183Q96D59 192 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 CATSPER2Q96P56 530 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 OLFM3Q96PB7 478 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 RAB3IPQ96QF0 476 aaPredicted RBP3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 NDNQ99608 321 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 SDF4Q9BRK5 362 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 LHPPQ9H008 270 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 SIL1Q9H173 461 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 NDST4Q9H3R1 872 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 MROH8Q9H579 483 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 TLR8Q9NR97 1041 aaKnown RBP3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 RMND1Q9NWS8 449 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 HYPKQ9NX55 129 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 IL1RAPL1Q9NZN1 696 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 CNOT7Q9UIV1 285 aaKnown RBP3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 PAM16Q9Y3D7 125 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 COMMD3-BMI1R4GMX3 469 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 HMGXB3Q12766 1538 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 URB2Q14146 1524 aaKnown RBP3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 NPHP4O75161 1426 aaPredicted RBP3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 ATP10DQ9P241 1426 aa3.43□□□□□ -1.86
SDCBPP3-201ENST00000419629 C17orf113A0A1B0GUU1 675 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 A0A1B0GVL5 298 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 TYW5A2RUC4 315 aaKnown RBP3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 KDM4EB2RXH2 506 aaPredicted RBP3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 AKR1B15C9JRZ8 316 aaPredicted RBP3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 IFIT3O14879 490 aaKnown RBP3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 CETN3O15182 167 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 TTI1O43156 1089 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 RGS14O43566 566 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 TRAPPC3O43617 180 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 ITM2AO43736 263 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 CYTH3O43739 400 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 MTA2O94776 668 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 LCATP04180 440 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 EIF2S1P05198 315 aaKnown RBP3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 PRSS2P07478 247 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 PAEPP09466 180 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 CCDC159P0C7I6 412 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 PCNAP12004 261 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 CKMT1AP12532 417 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 CPA3P15088 417 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 NAGAP17050 411 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 ATP6V1C1P21283 382 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 GNLYP22749 145 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 S100A1P23297 94 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 SP100P23497 879 aaPredicted RBP3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 TMPOP42166 694 aaKnown RBP3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 LIFRP42702 1097 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 CENPAP49450 140 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 COMPP49747 757 aaPredicted RBP3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 DSCR9P59020 149 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 PDE1BQ01064 536 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 CHRNDQ07001 517 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 ST3GAL1Q11201 340 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 FOXD4Q12950 439 aaPredicted RBP3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 ZBTB17Q13105 803 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 TBX2Q13207 712 aaPredicted RBP3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 TRPC3Q13507 836 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 BTG3Q14201 252 aaPredicted RBP3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 RCN1Q15293 331 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 ME3Q16798 604 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 CCDC153Q494R4 210 aa3.42□□□□□ -1.86
SDCBPP3-201ENST00000419629 CYP26C1Q6V0L0 522 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms