RNA–Protein interactions for RNA: ENST00000419020.1

DDX39B-205, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-205ENST00000419020 UPF2Q9HAU5 1272 aaKnown RBP11.39□□□□□ -0.59
DDX39B-205ENST00000419020 SCHIP1Q9P0W5 487 aaPredicted RBP11.39□□□□□ -0.59
DDX39B-205ENST00000419020 UBA2Q9UBT2 640 aaPredicted RBP11.39□□□□□ -0.59
DDX39B-205ENST00000419020 PCDHA7Q9UN72 937 aa11.39□□□□□ -0.59
DDX39B-205ENST00000419020 MTMR6Q9Y217 621 aa11.39□□□□□ -0.59
DDX39B-205ENST00000419020 NCOA6Q14686 2063 aaPredicted RBP11.39□□□□□ -0.59
DDX39B-205ENST00000419020 FANCGO15287 622 aa11.38□□□□□ -0.59
DDX39B-205ENST00000419020 CREB3O43889 395 aa11.38□□□□□ -0.59
DDX39B-205ENST00000419020 AGAP20933 346 aa11.38□□□□□ -0.59
DDX39B-205ENST00000419020 VIPR1P32241 457 aa11.38□□□□□ -0.59
DDX39B-205ENST00000419020 RORAP35398 523 aa11.38□□□□□ -0.59
DDX39B-205ENST00000419020 CSNK1DP48730 415 aa11.38□□□□□ -0.59
DDX39B-205ENST00000419020 SOX8P57073 446 aa11.38□□□□□ -0.59
DDX39B-205ENST00000419020 PAK1Q13153 545 aa11.38□□□□□ -0.59
DDX39B-205ENST00000419020 PRAMEF17Q5VTA0 474 aa11.38□□□□□ -0.59
DDX39B-205ENST00000419020 RFLNAQ6ZTI6 216 aa11.38□□□□□ -0.59
DDX39B-205ENST00000419020 ZDHHC17Q8IUH5 632 aa11.38□□□□□ -0.59
DDX39B-205ENST00000419020 SMYD4Q8IYR2 804 aaPredicted RBP11.38□□□□□ -0.59
DDX39B-205ENST00000419020 UBXN4Q92575 508 aa11.38□□□□□ -0.59
DDX39B-205ENST00000419020 NRGNQ92686 78 aa11.38□□□□□ -0.59
DDX39B-205ENST00000419020 CFAP57Q96MR6 1250 aa11.38□□□□□ -0.59
DDX39B-205ENST00000419020 ENKD1Q9H0I2 346 aa11.38□□□□□ -0.59
DDX39B-205ENST00000419020 PDFQ9HBH1 243 aa11.38□□□□□ -0.59
DDX39B-205ENST00000419020 EPHA6Q9UF33 1036 aa11.38□□□□□ -0.59
DDX39B-205ENST00000419020 CD84Q9UIB8 345 aa11.38□□□□□ -0.59
DDX39B-205ENST00000419020 SH3BGRL2Q9UJC5 107 aa11.38□□□□□ -0.59
DDX39B-205ENST00000419020 TRIM49BA6NDI0 452 aa11.37□□□□□ -0.59
DDX39B-205ENST00000419020 J3KR12 359 aa11.37□□□□□ -0.59
DDX39B-205ENST00000419020 CLDN14O95500 239 aa11.37□□□□□ -0.59
DDX39B-205ENST00000419020 ASMTLO95671 621 aa11.37□□□□□ -0.59
DDX39B-205ENST00000419020 JCHAINP01591 159 aa11.37□□□□□ -0.59
DDX39B-205ENST00000419020 ATP1A1P05023 1023 aaKnown RBP11.37□□□□□ -0.59
DDX39B-205ENST00000419020 XRCC1P18887 633 aaPredicted RBP11.37□□□□□ -0.59
DDX39B-205ENST00000419020 ADRA1BP35368 520 aa11.37□□□□□ -0.59
DDX39B-205ENST00000419020 SLC19A1P41440 591 aa11.37□□□□□ -0.59
DDX39B-205ENST00000419020 SNX16P57768 344 aa11.37□□□□□ -0.59
DDX39B-205ENST00000419020 NCF4Q15080 339 aa11.37□□□□□ -0.59
DDX39B-205ENST00000419020 PTPRRQ15256 657 aa11.37□□□□□ -0.59
DDX39B-205ENST00000419020 GPR19Q15760 415 aa11.37□□□□□ -0.59
DDX39B-205ENST00000419020 FAM102AQ5T9C2 384 aaPredicted RBP11.37□□□□□ -0.59
DDX39B-205ENST00000419020 TMEM207Q6UWW9 146 aa11.37□□□□□ -0.59
DDX39B-205ENST00000419020 GFRALQ6UXV0 394 aa11.37□□□□□ -0.59
DDX39B-205ENST00000419020 TECPR1Q7Z6L1 1165 aa11.37□□□□□ -0.59
DDX39B-205ENST00000419020 RTL3Q8N8U3 475 aaKnown RBP11.37□□□□□ -0.59
DDX39B-205ENST00000419020 COG1Q8WTW3 980 aa11.37□□□□□ -0.59
DDX39B-205ENST00000419020 CCDC47Q96A33 483 aaKnown RBP11.37□□□□□ -0.59
DDX39B-205ENST00000419020 COX14Q96I36 57 aa11.37□□□□□ -0.59
DDX39B-205ENST00000419020 CNDP1Q96KN2 507 aa11.37□□□□□ -0.59
DDX39B-205ENST00000419020 PCMTD1Q96MG8 357 aaPredicted RBP11.37□□□□□ -0.59
DDX39B-205ENST00000419020 SMR3AQ99954 134 aa11.37□□□□□ -0.59
DDX39B-205ENST00000419020 TMEM121Q9BTD3 319 aa11.37□□□□□ -0.59
DDX39B-205ENST00000419020 KCND1Q9NSA2 647 aa11.37□□□□□ -0.59
DDX39B-205ENST00000419020 ZNF624Q9P2J8 865 aaPredicted RBP11.37□□□□□ -0.59
DDX39B-205ENST00000419020 TNFRSF10DQ9UBN6 386 aa11.37□□□□□ -0.59
DDX39B-205ENST00000419020 PCDHGC3Q9UN70 934 aa11.37□□□□□ -0.59
DDX39B-205ENST00000419020 CCDC78A2IDD5 438 aa11.36□□□□□ -0.59
DDX39B-205ENST00000419020 BECN2A8MW95 431 aa11.36□□□□□ -0.59
DDX39B-205ENST00000419020 PSMD11O00231 422 aa11.36□□□□□ -0.59
DDX39B-205ENST00000419020 KLF7O75840 302 aaPredicted RBP11.36□□□□□ -0.59
DDX39B-205ENST00000419020 VIPP01282 170 aa11.36□□□□□ -0.59
DDX39B-205ENST00000419020 ARCN1P48444 511 aaKnown RBP11.36□□□□□ -0.59
DDX39B-205ENST00000419020 YBEYP58557 167 aaPredicted RBP11.36□□□□□ -0.59
DDX39B-205ENST00000419020 TUBB4BP68371 445 aa11.36□□□□□ -0.59
DDX39B-205ENST00000419020 ATP11AP98196 1134 aa11.36□□□□□ -0.59
DDX39B-205ENST00000419020 TUBB2AQ13885 445 aa11.36□□□□□ -0.59
DDX39B-205ENST00000419020 PARP15Q460N3 678 aa11.36□□□□□ -0.59
DDX39B-205ENST00000419020 IGFL2Q6UWQ7 119 aa11.36□□□□□ -0.59
DDX39B-205ENST00000419020 MEX3BQ6ZN04 569 aaKnown RBP11.36□□□□□ -0.59
DDX39B-205ENST00000419020 TSPAN33Q86UF1 283 aa11.36□□□□□ -0.59
DDX39B-205ENST00000419020 TRIM48Q8IWZ4 208 aa11.36□□□□□ -0.59
DDX39B-205ENST00000419020 EHBP1Q8NDI1 1231 aa11.36□□□□□ -0.59
DDX39B-205ENST00000419020 NR4A3Q92570 626 aa11.36□□□□□ -0.59
DDX39B-205ENST00000419020 SCAMP4Q969E2 229 aa11.36□□□□□ -0.59
DDX39B-205ENST00000419020 AP2M1Q96CW1 435 aa11.36□□□□□ -0.59
DDX39B-205ENST00000419020 ZNF501Q96CX3 271 aaPredicted RBP11.36□□□□□ -0.59
DDX39B-205ENST00000419020 ZNF396Q96N95 335 aaPredicted RBP11.36□□□□□ -0.59
DDX39B-205ENST00000419020 IP6K3Q96PC2 410 aa11.36□□□□□ -0.59
DDX39B-205ENST00000419020 GBP5Q96PP8 586 aa11.36□□□□□ -0.59
DDX39B-205ENST00000419020 AGAP2Q99490 1192 aa11.36□□□□□ -0.59
DDX39B-205ENST00000419020 TREX2Q9BQ50 279 aaPredicted RBP11.36□□□□□ -0.59
DDX39B-205ENST00000419020 TUBB2BQ9BVA1 445 aa11.36□□□□□ -0.59
DDX39B-205ENST00000419020 RAB33BQ9H082 229 aa11.36□□□□□ -0.59
DDX39B-205ENST00000419020 ABCG8Q9H221 673 aa11.36□□□□□ -0.59
DDX39B-205ENST00000419020 UBE2TQ9NPD8 197 aaPredicted RBP11.36□□□□□ -0.59
DDX39B-205ENST00000419020 SPTBP11277 2137 aa11.36□□□□□ -0.59
DDX39B-205ENST00000419020 SEC16AO15027 2179 aa11.35□□□□□ -0.59
DDX39B-205ENST00000419020 NPIPB15A6NHN6 443 aaPredicted RBP11.35□□□□□ -0.59
DDX39B-205ENST00000419020 WASH4PA8MWX3 477 aa11.35□□□□□ -0.59
DDX39B-205ENST00000419020 LDB2O43679 373 aa11.35□□□□□ -0.59
DDX39B-205ENST00000419020 UNC5CO95185 931 aa11.35□□□□□ -0.59
DDX39B-205ENST00000419020 ME1P48163 572 aa11.35□□□□□ -0.59
DDX39B-205ENST00000419020 PMS1P54277 932 aaKnown RBP11.35□□□□□ -0.59
DDX39B-205ENST00000419020 FKBP3Q00688 224 aaKnown RBP11.35□□□□□ -0.59
DDX39B-205ENST00000419020 CETN1Q12798 172 aa11.35□□□□□ -0.59
DDX39B-205ENST00000419020 ABRQ12979 859 aa11.35□□□□□ -0.59
DDX39B-205ENST00000419020 GPR18Q14330 331 aa11.35□□□□□ -0.59
DDX39B-205ENST00000419020 SSPNQ14714 243 aa11.35□□□□□ -0.59
DDX39B-205ENST00000419020 PRKD1Q15139 912 aaPredicted RBP11.35□□□□□ -0.59
DDX39B-205ENST00000419020 TLR1Q15399 786 aa11.35□□□□□ -0.59
DDX39B-205ENST00000419020 TMEM198Q66K66 360 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms