RNA–Protein interactions for RNA: ENST00000418897.5

DDX39B-204, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-204ENST00000418897 C18orf8Q96DM3 657 aa11.73□□□□□ -0.53
DDX39B-204ENST00000418897 SLX1AQ9BQ83 275 aa11.73□□□□□ -0.53
DDX39B-204ENST00000418897 ABCG8Q9H221 673 aa11.73□□□□□ -0.53
DDX39B-204ENST00000418897 CXXC4Q9H2H0 198 aa11.73□□□□□ -0.53
DDX39B-204ENST00000418897 OLAHQ9NV23 265 aa11.73□□□□□ -0.53
DDX39B-204ENST00000418897 CD84Q9UIB8 345 aa11.73□□□□□ -0.53
DDX39B-204ENST00000418897 NOVA2Q9UNW9 492 aaKnown RBP11.73□□□□□ -0.53
DDX39B-204ENST00000418897 RPH3AQ9Y2J0 694 aaPredicted RBP11.73□□□□□ -0.53
DDX39B-204ENST00000418897 SEC16AO15027 2179 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 PRRC2AP48634 2157 aaKnown RBP11.72□□□□□ -0.53
DDX39B-204ENST00000418897 SPTBP11277 2137 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 IGHV5-51A0A0C4DH38 117 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 FAM237AA0A1B0GTK4 181 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 C19orf84I3L1E1 186 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 PRAMEF11O60813 436 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 CPNE3O75131 537 aaKnown RBP11.72□□□□□ -0.53
DDX39B-204ENST00000418897 ATP1A1P05023 1023 aaKnown RBP11.72□□□□□ -0.53
DDX39B-204ENST00000418897 VIPR1P32241 457 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 KRT9P35527 623 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 SCNN1AP37088 669 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 IST1P53990 364 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 KCNK10P57789 538 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 PPP1CAP62136 330 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 FOXD4Q12950 439 aaPredicted RBP11.72□□□□□ -0.53
DDX39B-204ENST00000418897 CDO1Q16878 200 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 CCDC14Q49A88 953 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 PLEKHS1Q5SXH7 462 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 PRAMEF17Q5VTA0 474 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 TMEM207Q6UWW9 146 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 SPOCD1Q6ZMY3 1216 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 PRIMA1Q86XR5 153 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 UMODL1-AS1Q8N2C9 162 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 LZTR1Q8N653 840 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 BCORP1Q8N888 145 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 DNAJB14Q8TBM8 379 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 ZDHHC12Q96GR4 267 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 COX14Q96I36 57 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 SLC41A2Q96JW4 573 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 IP6K3Q96PC2 410 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 SMIM14Q96QK8 99 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 CRACR2AQ9BSW2 395 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 NLNQ9BYT8 704 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 UCK1Q9HA47 277 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 SEMA3GQ9NS98 782 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 SEMA5BQ9P283 1151 aa11.72□□□□□ -0.53
DDX39B-204ENST00000418897 ZNF624Q9P2J8 865 aaPredicted RBP11.72□□□□□ -0.53
DDX39B-204ENST00000418897 KIR2DS5A0A0G2JLQ3 304 aa11.71□□□□□ -0.53
DDX39B-204ENST00000418897 A0A0G2JNG1 304 aa11.71□□□□□ -0.53
DDX39B-204ENST00000418897 NPIPB15A6NHN6 443 aaPredicted RBP11.71□□□□□ -0.53
DDX39B-204ENST00000418897 OR5K4A6NMS3 321 aa11.71□□□□□ -0.53
DDX39B-204ENST00000418897 KIR2DS3K7RE56 304 aa11.71□□□□□ -0.53
DDX39B-204ENST00000418897 EBLN1P0CF75 366 aa11.71□□□□□ -0.53
DDX39B-204ENST00000418897 ACP5P13686 325 aa11.71□□□□□ -0.53
DDX39B-204ENST00000418897 XRCC1P18887 633 aaPredicted RBP11.71□□□□□ -0.53
DDX39B-204ENST00000418897 SLC9A1P19634 815 aa11.71□□□□□ -0.53
DDX39B-204ENST00000418897 EPHB2P29323 1055 aa11.71□□□□□ -0.53
DDX39B-204ENST00000418897 DNAJA1P31689 397 aaKnown RBP11.71□□□□□ -0.53
DDX39B-204ENST00000418897 SLC19A1P41440 591 aa11.71□□□□□ -0.53
DDX39B-204ENST00000418897 GSDMDP57764 484 aa11.71□□□□□ -0.53
DDX39B-204ENST00000418897 ACY1Q03154 408 aa11.71□□□□□ -0.53
DDX39B-204ENST00000418897 LRRC63Q05C16 580 aa11.71□□□□□ -0.53
DDX39B-204ENST00000418897 Q0VFX4 171 aa11.71□□□□□ -0.53
DDX39B-204ENST00000418897 KIR2DS5Q14953 304 aa11.71□□□□□ -0.53
DDX39B-204ENST00000418897 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.71□□□□□ -0.53
DDX39B-204ENST00000418897 PARP15Q460N3 678 aa11.71□□□□□ -0.53
DDX39B-204ENST00000418897 CCDC40Q4G0X9 1142 aa11.71□□□□□ -0.53
DDX39B-204ENST00000418897 COBLL1Q53SF7 1204 aa11.71□□□□□ -0.53
DDX39B-204ENST00000418897 B3GNTL1Q67FW5 361 aaPredicted RBP11.71□□□□□ -0.53
DDX39B-204ENST00000418897 ENOSF1Q7L5Y1 443 aa11.71□□□□□ -0.53
DDX39B-204ENST00000418897 TRIM59Q8IWR1 403 aa11.71□□□□□ -0.53
DDX39B-204ENST00000418897 SIDT2Q8NBJ9 832 aaKnown RBP11.71□□□□□ -0.53
DDX39B-204ENST00000418897 PPP4R1Q8TF05 950 aa11.71□□□□□ -0.53
DDX39B-204ENST00000418897 HERPUD2Q9BSE4 406 aa11.71□□□□□ -0.53
DDX39B-204ENST00000418897 MLPHQ9BV36 600 aaPredicted RBP11.71□□□□□ -0.53
DDX39B-204ENST00000418897 LRRC19Q9H756 370 aa11.71□□□□□ -0.53
DDX39B-204ENST00000418897 CBX8Q9HC52 389 aa11.71□□□□□ -0.53
DDX39B-204ENST00000418897 CNOT6Q9ULM6 557 aaKnown RBP11.71□□□□□ -0.53
DDX39B-204ENST00000418897 PCDHGC4Q9Y5F7 938 aa11.71□□□□□ -0.53
DDX39B-204ENST00000418897 CSPG4Q6UVK1 2322 aa11.7□□□□□ -0.54
DDX39B-204ENST00000418897 FOXN3O00409 490 aaPredicted RBP11.7□□□□□ -0.54
DDX39B-204ENST00000418897 PEX12O00623 359 aa11.7□□□□□ -0.54
DDX39B-204ENST00000418897 HTRA2O43464 458 aaPredicted RBP11.7□□□□□ -0.54
DDX39B-204ENST00000418897 CREB3O43889 395 aa11.7□□□□□ -0.54
DDX39B-204ENST00000418897 CLDN14O95500 239 aa11.7□□□□□ -0.54
DDX39B-204ENST00000418897 ASMTLO95671 621 aa11.7□□□□□ -0.54
DDX39B-204ENST00000418897 F13A1P00488 732 aa11.7□□□□□ -0.54
DDX39B-204ENST00000418897 PNMA6AP0CW24 399 aaPredicted RBP11.7□□□□□ -0.54
DDX39B-204ENST00000418897 ZSCAN22P10073 491 aaPredicted RBP11.7□□□□□ -0.54
DDX39B-204ENST00000418897 CDH5P33151 784 aaPredicted RBP11.7□□□□□ -0.54
DDX39B-204ENST00000418897 SCNN1BP51168 640 aa11.7□□□□□ -0.54
DDX39B-204ENST00000418897 CASP6P55212 293 aa11.7□□□□□ -0.54
DDX39B-204ENST00000418897 MARSP56192 900 aaKnown RBP11.7□□□□□ -0.54
DDX39B-204ENST00000418897 NSUN2Q08J23 767 aaKnown RBP eCLIP11.7□□□□□ -0.54
DDX39B-204ENST00000418897 PNOCQ13519 176 aa11.7□□□□□ -0.54
DDX39B-204ENST00000418897 ZNF169Q14929 603 aaPredicted RBP11.7□□□□□ -0.54
DDX39B-204ENST00000418897 ZNF658Q5TYW1 1059 aaPredicted RBP11.7□□□□□ -0.54
DDX39B-204ENST00000418897 GFRALQ6UXV0 394 aa11.7□□□□□ -0.54
DDX39B-204ENST00000418897 Q71RC1 249 aaPredicted RBP11.7□□□□□ -0.54
DDX39B-204ENST00000418897 GPT2Q8TD30 523 aa11.7□□□□□ -0.54
DDX39B-204ENST00000418897 RXFP2Q8WXD0 754 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms