RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 TPP1O14773 563 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 ADAMTS4O75173 837 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 ETS1P14921 441 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 PIK3R1P27986 724 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 NSG1P42857 185 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 RAB10P61026 200 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 KIAA1161Q6NSJ0 714 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 MRPL10Q7Z7H8 261 aaKnown RBP16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 DCAF4L2Q8NA75 395 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 MCMBPQ9BTE3 642 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 COQ6Q9Y2Z9 468 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 SDC3O75056 442 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 VNN1O95497 513 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 CST6Q15828 149 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 CEP78Q5JTW2 689 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 TMEM240Q5SV17 173 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 LONP2Q86WA8 852 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 SPPL2AQ8TCT8 520 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 FGF13Q92913 245 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 NXPE3Q969Y0 559 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 EPN3Q9H201 632 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 ADAMTS5Q9UNA0 930 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 TYRP1P17643 537 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 RXRGP48443 463 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 CLCNKAP51800 687 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 PRPF38BQ5VTL8 546 aaKnown RBP16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 ZHX1-C8orf76Q96EF9 292 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 FBRSL1Q9HCM7 1045 aaKnown RBP16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 HMGXB4Q9UGU5 601 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 A0A1W2PQU0 124 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 CAMK1DQ8IU85 385 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 PPCDCQ96CD2 204 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 TUBGCP5Q96RT8 1024 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 KCTD14Q9BQ13 255 aaPredicted RBP16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 INTS10Q9NVR2 710 aaKnown RBP16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 KCNK6Q9Y257 313 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 STON1Q9Y6Q2 735 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 MORC2Q9Y6X9 1032 aaPredicted RBP16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 TFE3P19532 575 aaPredicted RBP16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 UGT1A1P22309 533 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 POU1F1P28069 291 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 KRR1Q13601 381 aaKnown RBP16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 TMEM31Q5JXX7 168 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 C9orf64Q5T6V5 341 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 SNX20Q7Z614 316 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 ZCCHC9Q8N567 271 aaKnown RBP16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 TFAP2BQ92481 460 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 CDC42EP4Q9H3Q1 356 aaKnown RBP16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 FNIP2Q9P278 1114 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 SATB2Q9UPW6 733 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 HS3ST4Q9Y661 456 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 CLCA3PQ9Y6N3 262 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 NBNO60934 754 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 PPP1R37O75864 691 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 TFEBP19484 476 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 MMP8P22894 467 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 POMZP3Q6PJE2 187 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 BBS12Q6ZW61 710 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 SMPDL3BQ92485 455 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 DLG3Q92796 817 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 OR2M4Q96R27 311 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 FKBPLQ9UIM3 349 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 UBR2Q8IWV8 1755 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 LDB2O43679 373 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 HNRNPDQ14103 355 aaKnown RBP16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 MICU2Q8IYU8 434 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 PTCD2Q8WV60 388 aaKnown RBP16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 VPS33AQ96AX1 596 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 POLE3Q9NRF9 147 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 ADAM30Q9UKF2 790 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 SDHBP21912 280 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 CYP4F3Q08477 520 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 CTBP1Q13363 440 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 GPRIN3Q6ZVF9 776 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 SLC29A4Q7RTT9 530 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 TRPV1Q8NER1 839 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 C1QTNF1Q9BXJ1 281 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 NEK6Q9HC98 313 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 EXD2Q9NVH0 621 aa16.8■□□□□ 0.28
SYNGAP1-202ENST00000418600 PER3P56645 1201 aa16.79■□□□□ 0.28
SYNGAP1-202ENST00000418600 ZNF805Q5CZA5 627 aa16.79■□□□□ 0.28
SYNGAP1-202ENST00000418600 DPP10Q8N608 796 aa16.79■□□□□ 0.28
SYNGAP1-202ENST00000418600 ADSSP30520 456 aa16.79■□□□□ 0.28
SYNGAP1-202ENST00000418600 MED27Q6P2C8 311 aa16.79■□□□□ 0.28
SYNGAP1-202ENST00000418600 FOXR2Q6PJQ5 311 aa16.79■□□□□ 0.28
SYNGAP1-202ENST00000418600 BEND5Q7L4P6 421 aa16.79■□□□□ 0.28
SYNGAP1-202ENST00000418600 NACC2Q96BF6 587 aa16.79■□□□□ 0.28
SYNGAP1-202ENST00000418600 SMAD5Q99717 465 aaKnown RBP16.79■□□□□ 0.28
SYNGAP1-202ENST00000418600 PALMDQ9NP74 551 aa16.79■□□□□ 0.28
SYNGAP1-202ENST00000418600 MIOSQ9NXC5 875 aa16.79■□□□□ 0.28
SYNGAP1-202ENST00000418600 SPEF2Q9C093 1822 aa16.79■□□□□ 0.28
SYNGAP1-202ENST00000418600 C8GP07360 202 aa16.79■□□□□ 0.28
SYNGAP1-202ENST00000418600 RALGPS1Q5JS13 557 aa16.79■□□□□ 0.28
SYNGAP1-202ENST00000418600 FGD3Q5JSP0 725 aa16.79■□□□□ 0.28
SYNGAP1-202ENST00000418600 GALNT7Q86SF2 657 aa16.79■□□□□ 0.28
SYNGAP1-202ENST00000418600 TCEAL8Q8IYN2 117 aa16.79■□□□□ 0.28
SYNGAP1-202ENST00000418600 NELL1Q92832 810 aa16.79■□□□□ 0.28
SYNGAP1-202ENST00000418600 QKIQ96PU8 341 aaKnown RBP eCLIP16.79■□□□□ 0.28
SYNGAP1-202ENST00000418600 CORO2BQ9UQ03 480 aa16.79■□□□□ 0.28
SYNGAP1-202ENST00000418600 MYH2Q9UKX2 1941 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms