RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 SMOXQ9NWM0 555 aa20.37■□□□□ 0.85
PKNOX1-202ENST00000418336 ZNHIT2Q9UHR6 403 aa20.37■□□□□ 0.85
PKNOX1-202ENST00000418336 KCNK6Q9Y257 313 aa20.37■□□□□ 0.85
PKNOX1-202ENST00000418336 ITPR1Q14643 2758 aa20.36■□□□□ 0.85
PKNOX1-202ENST00000418336 CHD6Q8TD26 2715 aa20.36■□□□□ 0.85
PKNOX1-202ENST00000418336 URB1O60287 2271 aaKnown RBP20.36■□□□□ 0.85
PKNOX1-202ENST00000418336 AGAP14A8MT82 685 aa20.36■□□□□ 0.85
PKNOX1-202ENST00000418336 LDB2O43679 373 aa20.36■□□□□ 0.85
PKNOX1-202ENST00000418336 STK10O94804 968 aaKnown RBP20.36■□□□□ 0.85
PKNOX1-202ENST00000418336 MPOP05164 745 aa20.36■□□□□ 0.85
PKNOX1-202ENST00000418336 ACP5P13686 325 aa20.36■□□□□ 0.85
PKNOX1-202ENST00000418336 FASLGP48023 281 aa20.36■□□□□ 0.85
PKNOX1-202ENST00000418336 CFHR1Q03591 330 aa20.36■□□□□ 0.85
PKNOX1-202ENST00000418336 ZFP36L1Q07352 338 aaKnown RBP20.36■□□□□ 0.85
PKNOX1-202ENST00000418336 SPIDRQ14159 915 aa20.36■□□□□ 0.85
PKNOX1-202ENST00000418336 P3H1Q32P28 736 aa20.36■□□□□ 0.85
PKNOX1-202ENST00000418336 SEL1L2Q5TEA6 688 aa20.36■□□□□ 0.85
PKNOX1-202ENST00000418336 FAM151BQ6UXP7 276 aa20.36■□□□□ 0.85
PKNOX1-202ENST00000418336 PRUNE1Q86TP1 453 aa20.36■□□□□ 0.85
PKNOX1-202ENST00000418336 SLITRK4Q8IW52 837 aa20.36■□□□□ 0.85
PKNOX1-202ENST00000418336 Q8N9G6 341 aaPredicted RBP20.36■□□□□ 0.85
PKNOX1-202ENST00000418336 BRSK1Q8TDC3 778 aa20.36■□□□□ 0.85
PKNOX1-202ENST00000418336 SLC37A2Q8TED4 501 aa20.36■□□□□ 0.85
PKNOX1-202ENST00000418336 C1orf54Q8WWF1 131 aa20.36■□□□□ 0.85
PKNOX1-202ENST00000418336 GLYATL1P3A0A0U1RQE8 302 aa20.35■□□□□ 0.85
PKNOX1-202ENST00000418336 VEGFDO43915 354 aa20.35■□□□□ 0.85
PKNOX1-202ENST00000418336 PPFIA2O75334 1257 aa20.35■□□□□ 0.85
PKNOX1-202ENST00000418336 PSMA3P25788 255 aa20.35■□□□□ 0.85
PKNOX1-202ENST00000418336 LSSP48449 732 aa20.35■□□□□ 0.85
PKNOX1-202ENST00000418336 OR1D5P58170 312 aa20.35■□□□□ 0.85
PKNOX1-202ENST00000418336 PEX6Q13608 980 aa20.35■□□□□ 0.85
PKNOX1-202ENST00000418336 PRPSAP1Q14558 356 aa20.35■□□□□ 0.85
PKNOX1-202ENST00000418336 ZDHHC20Q5W0Z9 365 aa20.35■□□□□ 0.85
PKNOX1-202ENST00000418336 IYDQ6PHW0 289 aa20.35■□□□□ 0.85
PKNOX1-202ENST00000418336 ZNF574Q6ZN55 896 aaPredicted RBP20.35■□□□□ 0.85
PKNOX1-202ENST00000418336 REXO1L1PQ8IX06 675 aa20.35■□□□□ 0.85
PKNOX1-202ENST00000418336 DDHD1Q8NEL9 900 aa20.35■□□□□ 0.85
PKNOX1-202ENST00000418336 OR13C4Q8NGS5 318 aa20.35■□□□□ 0.85
PKNOX1-202ENST00000418336 GRAMD1AQ96CP6 724 aa20.35■□□□□ 0.85
PKNOX1-202ENST00000418336 CCDC97Q96F63 343 aaPredicted RBP20.35■□□□□ 0.85
PKNOX1-202ENST00000418336 LIN37Q96GY3 246 aaPredicted RBP20.35■□□□□ 0.85
PKNOX1-202ENST00000418336 PPP1R2P1Q96PQ5 205 aa20.35■□□□□ 0.85
PKNOX1-202ENST00000418336 GFM1Q96RP9 751 aaKnown RBP20.35■□□□□ 0.85
PKNOX1-202ENST00000418336 C19orf43Q9BQ61 176 aa20.35■□□□□ 0.85
PKNOX1-202ENST00000418336 FRMD8P1Q9BZ68 369 aaPredicted RBP20.35■□□□□ 0.85
PKNOX1-202ENST00000418336 SCHIP1Q9P0W5 487 aaPredicted RBP20.35■□□□□ 0.85
PKNOX1-202ENST00000418336 ATXN7L1Q9ULK2 861 aaPredicted RBP20.35■□□□□ 0.85
PKNOX1-202ENST00000418336 SATB2Q9UPW6 733 aa20.35■□□□□ 0.85
PKNOX1-202ENST00000418336 A0A087WV48 116 aa20.34■□□□□ 0.85
PKNOX1-202ENST00000418336 AP2A1O95782 977 aa20.34■□□□□ 0.85
PKNOX1-202ENST00000418336 LPOP22079 712 aaPredicted RBP20.34■□□□□ 0.85
PKNOX1-202ENST00000418336 CD1CP29017 333 aa20.34■□□□□ 0.85
PKNOX1-202ENST00000418336 CCKBRP32239 447 aa20.34■□□□□ 0.85
PKNOX1-202ENST00000418336 TMEM115Q12893 351 aaPredicted RBP20.34■□□□□ 0.85
PKNOX1-202ENST00000418336 SQSTM1Q13501 440 aa20.34■□□□□ 0.85
PKNOX1-202ENST00000418336 TBC1D25Q3MII6 688 aa20.34■□□□□ 0.85
PKNOX1-202ENST00000418336 ARHGEF18Q6ZSZ5 1173 aa20.34■□□□□ 0.85
PKNOX1-202ENST00000418336 TRIM58Q8NG06 486 aa20.34■□□□□ 0.85
PKNOX1-202ENST00000418336 OR4K2Q8NGD2 314 aa20.34■□□□□ 0.85
PKNOX1-202ENST00000418336 SNIP1Q8TAD8 396 aaKnown RBP20.34■□□□□ 0.85
PKNOX1-202ENST00000418336 POLR1BQ9H9Y6 1135 aa20.34■□□□□ 0.85
PKNOX1-202ENST00000418336 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.34■□□□□ 0.85
PKNOX1-202ENST00000418336 FKBPLQ9UIM3 349 aa20.34■□□□□ 0.85
PKNOX1-202ENST00000418336 PCDHGA8Q9Y5G5 932 aa20.34■□□□□ 0.85
PKNOX1-202ENST00000418336 SGTAO43765 313 aa20.33■□□□□ 0.85
PKNOX1-202ENST00000418336 ETS1P14921 441 aa20.33■□□□□ 0.85
PKNOX1-202ENST00000418336 BRAFP15056 766 aa20.33■□□□□ 0.85
PKNOX1-202ENST00000418336 STIP1P31948 543 aaKnown RBP20.33■□□□□ 0.85
PKNOX1-202ENST00000418336 CTSCP53634 463 aa20.33■□□□□ 0.85
PKNOX1-202ENST00000418336 UBE2IP63279 158 aaKnown RBP20.33■□□□□ 0.85
PKNOX1-202ENST00000418336 GABREP78334 506 aa20.33■□□□□ 0.85
PKNOX1-202ENST00000418336 GPRC6AQ5T6X5 926 aa20.33■□□□□ 0.85
PKNOX1-202ENST00000418336 DRICH1Q6PGQ1 229 aaPredicted RBP20.33■□□□□ 0.85
PKNOX1-202ENST00000418336 CRTC3Q6UUV7 619 aa20.33■□□□□ 0.85
PKNOX1-202ENST00000418336 LRRTM4Q86VH4 590 aa20.33■□□□□ 0.85
PKNOX1-202ENST00000418336 RASGEF1AQ8N9B8 481 aa20.33■□□□□ 0.85
PKNOX1-202ENST00000418336 ALS2CR12Q96Q35 445 aa20.33■□□□□ 0.85
PKNOX1-202ENST00000418336 TIMM29Q9BSF4 260 aa20.33■□□□□ 0.85
PKNOX1-202ENST00000418336 FOXP3Q9BZS1 431 aa20.33■□□□□ 0.85
PKNOX1-202ENST00000418336 PRDM8Q9NQV8 689 aa20.33■□□□□ 0.85
PKNOX1-202ENST00000418336 KLC4Q9NSK0 619 aa20.33■□□□□ 0.85
PKNOX1-202ENST00000418336 FEZ2Q9UHY8 353 aaPredicted RBP20.33■□□□□ 0.85
PKNOX1-202ENST00000418336 AK5Q9Y6K8 562 aa20.33■□□□□ 0.85
PKNOX1-202ENST00000418336 TRBV23OR9-2A0A075B6M9 112 aa20.32■□□□□ 0.84
PKNOX1-202ENST00000418336 IGHV1OR21-1A0A087WYE8 117 aa20.32■□□□□ 0.84
PKNOX1-202ENST00000418336 GOLGA6L3A6NEY3 463 aa20.32■□□□□ 0.84
PKNOX1-202ENST00000418336 STX7O15400 261 aaKnown RBP20.32■□□□□ 0.84
PKNOX1-202ENST00000418336 SUN1O94901 812 aa20.32■□□□□ 0.84
PKNOX1-202ENST00000418336 CDK14O94921 469 aa20.32■□□□□ 0.84
PKNOX1-202ENST00000418336 ZNF7P17097 686 aaPredicted RBP20.32■□□□□ 0.84
PKNOX1-202ENST00000418336 CSF2RBP32927 897 aa20.32■□□□□ 0.84
PKNOX1-202ENST00000418336 EIF2S3P41091 472 aaKnown RBP20.32■□□□□ 0.84
PKNOX1-202ENST00000418336 GPR3P46089 330 aa20.32■□□□□ 0.84
PKNOX1-202ENST00000418336 PLA2G4EQ3MJ16 856 aa20.32■□□□□ 0.84
PKNOX1-202ENST00000418336 PDLIM2Q96JY6 352 aa20.32■□□□□ 0.84
PKNOX1-202ENST00000418336 NUDT22Q9BRQ3 303 aa20.32■□□□□ 0.84
PKNOX1-202ENST00000418336 SEMA6CQ9H3T2 930 aa20.32■□□□□ 0.84
PKNOX1-202ENST00000418336 LRRC40Q9H9A6 602 aa20.32■□□□□ 0.84
PKNOX1-202ENST00000418336 ETNK1Q9HBU6 452 aa20.32■□□□□ 0.84
PKNOX1-202ENST00000418336 PKP3Q9Y446 797 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms