RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 PDE1CQ14123 709 aaPredicted RBP6.78□□□□□ -1.32
CPS1-202ENST00000417946 ZNF460Q14592 562 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 E2F5Q15329 346 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 ZNF658BQ4V348 819 aaPredicted RBP6.78□□□□□ -1.32
CPS1-202ENST00000417946 PPM1JQ5JR12 505 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 ERAP2Q6P179 960 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 FBXL19Q6PCT2 694 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.78□□□□□ -1.32
CPS1-202ENST00000417946 USP30Q70CQ3 517 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 PIM3Q86V86 326 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 SERPINA9Q86WD7 417 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 SLC41A1Q8IVJ1 513 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 RAVER1Q8IY67 606 aaKnown RBP6.78□□□□□ -1.32
CPS1-202ENST00000417946 SRRM1Q8IYB3 904 aaKnown RBP6.78□□□□□ -1.32
CPS1-202ENST00000417946 NRSN1Q8IZ57 195 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 CENPLQ8N0S6 344 aaPredicted RBP6.78□□□□□ -1.32
CPS1-202ENST00000417946 C4orf33Q8N1A6 199 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 NXPE1Q8N323 547 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 HDDC3Q8N4P3 179 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 TRAM1L1Q8N609 369 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 PLA2G15Q8NCC3 412 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 PJA1Q8NG27 643 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 CALML6Q8TD86 181 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 SCG3Q8WXD2 468 aaKnown RBP6.78□□□□□ -1.32
CPS1-202ENST00000417946 CDKL2Q92772 493 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 RAB7BQ96AH8 199 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 ATXN7L3BQ96GX2 97 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 SHDQ96IW2 340 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 GPR78Q96P69 363 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 UHRF1Q96T88 793 aaPredicted RBP6.78□□□□□ -1.32
CPS1-202ENST00000417946 INSM2Q96T92 566 aaPredicted RBP6.78□□□□□ -1.32
CPS1-202ENST00000417946 SLC30A3Q99726 388 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 AARSD1Q9BTE6 412 aaKnown RBP6.78□□□□□ -1.32
CPS1-202ENST00000417946 CENPHQ9H3R5 247 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 SSU72Q9NP77 194 aaKnown RBP6.78□□□□□ -1.32
CPS1-202ENST00000417946 SNX15Q9NRS6 342 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 INTS10Q9NVR2 710 aaKnown RBP6.78□□□□□ -1.32
CPS1-202ENST00000417946 NSMCE4AQ9NXX6 385 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.78□□□□□ -1.32
CPS1-202ENST00000417946 GALPQ9UBC7 116 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 GRID1Q9ULK0 1009 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 FZD4Q9ULV1 537 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 FNDC3AQ9Y2H6 1198 aaKnown RBP6.78□□□□□ -1.32
CPS1-202ENST00000417946 PKP3Q9Y446 797 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 ACTL7BQ9Y614 415 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 TNRC6BQ9UPQ9 1833 aaKnown RBP6.78□□□□□ -1.32
CPS1-202ENST00000417946 CEP192Q8TEP8 1941 aa6.78□□□□□ -1.32
CPS1-202ENST00000417946 KMT2EQ8IZD2 1858 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 TP53BP1Q12888 1972 aaPredicted RBP6.77□□□□□ -1.33
CPS1-202ENST00000417946 IQANK1A0A1B0GTG1 560 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 IGLON5A6NGN9 336 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 GOLGA8RI6L899 631 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 K7ESF4 209 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 WNT9AO14904 365 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 PRPF4O43172 522 aaKnown RBP eCLIP6.77□□□□□ -1.33
CPS1-202ENST00000417946 PHGDHO43175 533 aaKnown RBP6.77□□□□□ -1.33
CPS1-202ENST00000417946 TSPAN6O43657 245 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 LILRB5O75023 590 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 NIPSNAP2O75323 286 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 SPAG7O75391 227 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 RNASEH2AO75792 299 aaKnown RBP6.77□□□□□ -1.33
CPS1-202ENST00000417946 TSPAN12O95859 305 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 SBK3P0C264 359 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 DHRS4L1P0CG22 281 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 TDGF1P13385 188 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 NR1D1P20393 614 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 ITGALP20701 1170 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 XPAP23025 273 aaPredicted RBP6.77□□□□□ -1.33
CPS1-202ENST00000417946 RPS3P23396 243 aaKnown RBP eCLIP6.77□□□□□ -1.33
CPS1-202ENST00000417946 ACRV1P26436 265 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 CNTFP26441 200 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 ACSL1P33121 698 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 SPRP35270 261 aaPredicted RBP6.77□□□□□ -1.33
CPS1-202ENST00000417946 ETV4P43268 484 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 RPS9P46781 194 aaKnown RBP6.77□□□□□ -1.33
CPS1-202ENST00000417946 SERPINB8P50452 374 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 TPMTP51580 245 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 DGKEP52429 567 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 ADARP55265 1226 aaKnown RBP6.77□□□□□ -1.33
CPS1-202ENST00000417946 RAB15P59190 212 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 PPARDQ03181 441 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 DPTQ07507 201 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 MTAPQ13126 283 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 DNAJC3Q13217 504 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 ARHGEF7Q14155 803 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 LRRC32Q14392 662 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 UBXN2BQ14CS0 331 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 WSCD2Q2TBF2 565 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 ZNF284Q2VY69 593 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 GPR33Q49SQ1 333 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 FASTKD1Q53R41 847 aaKnown RBP6.77□□□□□ -1.33
CPS1-202ENST00000417946 ZRANB3Q5FWF4 1079 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 ZNF648Q5T619 568 aaPredicted RBP6.77□□□□□ -1.33
CPS1-202ENST00000417946 GPRC6AQ5T6X5 926 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 HECTD2Q5U5R9 776 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 SDE2Q6IQ49 451 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 MRNIPQ6NTE8 343 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 KIAA1324Q6UXG2 1013 aaKnown RBP6.77□□□□□ -1.33
CPS1-202ENST00000417946 NDUFAF2Q8N183 169 aa6.77□□□□□ -1.33
CPS1-202ENST00000417946 KRT222Q8N1A0 295 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms