RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 TCF15Q12870 199 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 ITIH4Q14624 930 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 INSCQ1MX18 579 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 FAM153CQ494X1 144 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 ZNF449Q6P9G9 518 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 LAYNQ6UX15 382 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 MACC1Q6ZN28 852 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 ABI3BPQ7Z7G0 1075 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 LDB1Q86U70 411 aaPredicted RBP8.38□□□□□ -1.07
TRIM48-201ENST00000417545 IQCHQ86VS3 1027 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 PARGQ86W56 976 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 GALNT13Q8IUC8 556 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 HID1Q8IV36 788 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 AGGF1Q8N302 714 aaeCLIP8.38□□□□□ -1.07
TRIM48-201ENST00000417545 OXR1Q8N573 874 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 PPM1NQ8N819 430 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 TMEM145Q8NBT3 493 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 DDHD1Q8NEL9 900 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 OR56A4Q8NGH8 313 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 DTX3LQ8TDB6 740 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 DNASE2BQ8WZ79 361 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 FUBP1Q96AE4 644 aaKnown RBP8.38□□□□□ -1.07
TRIM48-201ENST00000417545 TCF12Q99081 682 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 CYTH2Q99418 400 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 SLC13A1Q9BZW2 595 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 OR2AG1Q9H205 316 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 ARRDC1-AS1Q9H2J1 176 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 CARS2Q9HA77 564 aaKnown RBP8.38□□□□□ -1.07
TRIM48-201ENST00000417545 EBF2Q9HAK2 575 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 LRRC4CQ9HCJ2 640 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 CYP4F12Q9HCS2 524 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 FBXO6Q9NRD1 293 aaPredicted RBP8.38□□□□□ -1.07
TRIM48-201ENST00000417545 INTS10Q9NVR2 710 aaKnown RBP8.38□□□□□ -1.07
TRIM48-201ENST00000417545 SMOXQ9NWM0 555 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 DNAJC28Q9NX36 388 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 ZNHIT2Q9UHR6 403 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 GNPTGQ9UJJ9 305 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 PILRBQ9UKJ0 227 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 FBXO5Q9UKT4 447 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 DOLKQ9UPQ8 538 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 TMEM98Q9Y2Y6 226 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 GPSM3Q9Y4H4 160 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 PCDHGA5Q9Y5G8 931 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 RALGAPA1Q6GYQ0 2036 aa8.38□□□□□ -1.07
TRIM48-201ENST00000417545 A0A1B0GVT2 93 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 TCRBV9S1A1TA0A576 114 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 CCDC151A5D8V7 595 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 OR2AG2A6NM03 316 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 GPR89AB7ZAQ6 455 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 POC1B-GALNT4F8VUJ3 575 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 TLR4O00206 839 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 KHNYNO15037 678 aaKnown RBP8.37□□□□□ -1.07
TRIM48-201ENST00000417545 RIPK2O43353 540 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 MTX2O75431 263 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 RASGRP1O95267 797 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 TNFP01375 233 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 INHBAP08476 426 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 GPR89BP0CG08 455 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 PRSS56P0CW18 603 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 PBLDP30039 288 aaPredicted RBP8.37□□□□□ -1.07
TRIM48-201ENST00000417545 MSH2P43246 934 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 GNPDA1P46926 289 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 CD151P48509 253 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 CDKN1CP49918 316 aaPredicted RBP8.37□□□□□ -1.07
TRIM48-201ENST00000417545 PFN3P60673 137 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 PPARDQ03181 441 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 TMEM115Q12893 351 aaPredicted RBP8.37□□□□□ -1.07
TRIM48-201ENST00000417545 ILF2Q12905 390 aaKnown RBP8.37□□□□□ -1.07
TRIM48-201ENST00000417545 CTBP1Q13363 440 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 NAB1Q13506 487 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 TMED2Q15363 201 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 DBN1Q16643 649 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 PLA2G4EQ3MJ16 856 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 SYTL3Q4VX76 610 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 TRIM61Q5EBN2 209 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 TRMT10BQ6PF06 316 aaKnown RBP8.37□□□□□ -1.07
TRIM48-201ENST00000417545 CRTC3Q6UUV7 619 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 IL27RAQ6UWB1 636 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 KDM7AQ6ZMT4 941 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 KIAA0408Q6ZU52 694 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 STRA8Q7Z7C7 330 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 LRRTM4Q86VH4 590 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 SLC26A11Q86WA9 606 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 RELL1Q8IUW5 271 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 UNC5BQ8IZJ1 945 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 PELI3Q8N2H9 469 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 GPR150Q8NGU9 434 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 CAVIN3Q969G5 261 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 ATXN7L3BQ96GX2 97 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 ZNF514Q96K75 400 aaPredicted RBP8.37□□□□□ -1.07
TRIM48-201ENST00000417545 BMFQ96LC9 184 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 GTPBP2Q9BX10 602 aaKnown RBP8.37□□□□□ -1.07
TRIM48-201ENST00000417545 TEX101Q9BY14 249 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 OSGEPL1Q9H4B0 414 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 RMI1Q9H9A7 625 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 TRIM39Q9HCM9 518 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 VPS18Q9P253 973 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 MARCH4Q9P2E8 410 aaPredicted RBP8.37□□□□□ -1.07
TRIM48-201ENST00000417545 FAM8A1Q9UBU6 413 aa8.37□□□□□ -1.07
TRIM48-201ENST00000417545 RAB21Q9UL25 225 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms