RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 PTPN7P35236 360 aa20.3■□□□□ 0.84
PTPRU-203ENST00000415600 POLD2P49005 469 aa20.3■□□□□ 0.84
PTPRU-203ENST00000415600 NR2C2P49116 596 aa20.3■□□□□ 0.84
PTPRU-203ENST00000415600 FNTAP49354 379 aa20.3■□□□□ 0.84
PTPRU-203ENST00000415600 DR1Q01658 176 aa20.3■□□□□ 0.84
PTPRU-203ENST00000415600 ZFP36L1Q07352 338 aaKnown RBP20.3■□□□□ 0.84
PTPRU-203ENST00000415600 NIPAL4Q0D2K0 466 aa20.3■□□□□ 0.84
PTPRU-203ENST00000415600 C19orf57Q0VDD7 668 aa20.3■□□□□ 0.84
PTPRU-203ENST00000415600 SLC10A2Q12908 348 aaPredicted RBP20.3■□□□□ 0.84
PTPRU-203ENST00000415600 KLF1Q13351 362 aaPredicted RBP20.3■□□□□ 0.84
PTPRU-203ENST00000415600 CUL1Q13616 776 aa20.3■□□□□ 0.84
PTPRU-203ENST00000415600 AMZ1Q400G9 498 aa20.3■□□□□ 0.84
PTPRU-203ENST00000415600 EMBQ6PCB8 327 aa20.3■□□□□ 0.84
PTPRU-203ENST00000415600 ZNF438Q7Z4V0 828 aa20.3■□□□□ 0.84
PTPRU-203ENST00000415600 C17orf82Q86X59 251 aaPredicted RBP20.3■□□□□ 0.84
PTPRU-203ENST00000415600 NRROSQ86YC3 692 aa20.3■□□□□ 0.84
PTPRU-203ENST00000415600 RFX6Q8HWS3 928 aa20.3■□□□□ 0.84
PTPRU-203ENST00000415600 PLD5Q8N7P1 536 aa20.3■□□□□ 0.84
PTPRU-203ENST00000415600 BBC3Q96PG8 261 aaPredicted RBP20.3■□□□□ 0.84
PTPRU-203ENST00000415600 OSBPL8Q9BZF1 889 aa20.3■□□□□ 0.84
PTPRU-203ENST00000415600 ZMYND15Q9H091 742 aa20.3■□□□□ 0.84
PTPRU-203ENST00000415600 RAB17Q9H0T7 212 aa20.3■□□□□ 0.84
PTPRU-203ENST00000415600 RMI1Q9H9A7 625 aa20.3■□□□□ 0.84
PTPRU-203ENST00000415600 WDR70Q9NW82 654 aa20.3■□□□□ 0.84
PTPRU-203ENST00000415600 SEPT10Q9P0V9 454 aa20.3■□□□□ 0.84
PTPRU-203ENST00000415600 PISDQ9UG56 409 aa20.3■□□□□ 0.84
PTPRU-203ENST00000415600 ATXN7L1Q9ULK2 861 aaPredicted RBP20.3■□□□□ 0.84
PTPRU-203ENST00000415600 TMEM98Q9Y2Y6 226 aa20.3■□□□□ 0.84
PTPRU-203ENST00000415600 NVLO15381 856 aaKnown RBP20.29■□□□□ 0.84
PTPRU-203ENST00000415600 PRLP01236 227 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 SLC2A4P14672 509 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 SLC5A2P31639 672 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 COILP38432 576 aaPredicted RBP20.29■□□□□ 0.84
PTPRU-203ENST00000415600 PTGIRP43119 386 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 SPINT3P49223 89 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 CARSP49589 748 aaKnown RBP20.29■□□□□ 0.84
PTPRU-203ENST00000415600 MAZP56270 477 aaKnown RBP20.29■□□□□ 0.84
PTPRU-203ENST00000415600 TFDP2Q14188 446 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 CASP8Q14790 479 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 NR1D2Q14995 579 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 PTPRRQ15256 657 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 ARHGAP40Q5TG30 622 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 CCDC81Q6ZN84 652 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 UTP11Q9Y3A2 253 aaKnown RBP20.29■□□□□ 0.84
PTPRU-203ENST00000415600 PCDHB11Q9Y5F2 797 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 ARHGEF17Q96PE2 2063 aaPredicted RBP20.29■□□□□ 0.84
PTPRU-203ENST00000415600 BAHCC1Q9P281 2608 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 ESYT3A0FGR9 886 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 HGSO14964 777 aaPredicted RBP20.29■□□□□ 0.84
PTPRU-203ENST00000415600 INPP4BO15327 924 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 SOD1P00441 154 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 FUCA1P04066 466 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 PPM1FP49593 454 aaPredicted RBP20.29■□□□□ 0.84
PTPRU-203ENST00000415600 B4GALNT1Q00973 533 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 SLC14A2Q15849 920 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 QPCTQ16769 361 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 PYCR3Q53H96 274 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 CCDC137Q6PK04 289 aaKnown RBP20.29■□□□□ 0.84
PTPRU-203ENST00000415600 MARK2Q7KZI7 788 aaKnown RBP20.29■□□□□ 0.84
PTPRU-203ENST00000415600 AVL9Q8NBF6 648 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 CAVIN3Q969G5 261 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 WBP1Q96G27 269 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 COX14Q96I36 57 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 HERPUD2Q9BSE4 406 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 B3GNT4Q9C0J1 378 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 ZFYVE1Q9HBF4 777 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 CPNE5Q9HCH3 593 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 OGFRQ9NZT2 677 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 ZNHIT2Q9UHR6 403 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 ACSL6Q9UKU0 697 aa20.29■□□□□ 0.84
PTPRU-203ENST00000415600 COL27A1Q8IZC6 1860 aaPredicted RBP20.29■□□□□ 0.84
PTPRU-203ENST00000415600 BPTFQ12830 3046 aa20.28■□□□□ 0.84
PTPRU-203ENST00000415600 KIF26BQ2KJY2 2108 aa20.28■□□□□ 0.84
PTPRU-203ENST00000415600 MTSS1O43312 755 aa20.28■□□□□ 0.84
PTPRU-203ENST00000415600 CD82P27701 267 aa20.28■□□□□ 0.84
PTPRU-203ENST00000415600 OR1D5P58170 312 aa20.28■□□□□ 0.84
PTPRU-203ENST00000415600 GPLD1P80108 840 aa20.28■□□□□ 0.84
PTPRU-203ENST00000415600 TRA2AQ13595 282 aaKnown RBP eCLIP20.28■□□□□ 0.84
PTPRU-203ENST00000415600 TTC27Q6P3X3 843 aa20.28■□□□□ 0.84
PTPRU-203ENST00000415600 SNRNP27Q8WVK2 155 aaKnown RBP20.28■□□□□ 0.84
PTPRU-203ENST00000415600 SLCO2A1Q92959 643 aa20.28■□□□□ 0.84
PTPRU-203ENST00000415600 RNF25Q96BH1 459 aaPredicted RBP20.28■□□□□ 0.84
PTPRU-203ENST00000415600 CCNL2Q96S94 520 aaPredicted RBP20.28■□□□□ 0.84
PTPRU-203ENST00000415600 SLC25A51Q9H1U9 297 aa20.28■□□□□ 0.84
PTPRU-203ENST00000415600 VIPAS39Q9H9C1 493 aa20.28■□□□□ 0.84
PTPRU-203ENST00000415600 FAM114A2Q9NRY5 505 aa20.28■□□□□ 0.84
PTPRU-203ENST00000415600 HOMER3Q9NSC5 361 aa20.28■□□□□ 0.84
PTPRU-203ENST00000415600 KCNK4Q9NYG8 393 aa20.28■□□□□ 0.84
PTPRU-203ENST00000415600 NFU1Q9UMS0 254 aa20.28■□□□□ 0.84
PTPRU-203ENST00000415600 SMG1Q96Q15 3661 aaKnown RBP20.27■□□□□ 0.84
PTPRU-203ENST00000415600 CASC3O15234 703 aaKnown RBP20.27■□□□□ 0.84
PTPRU-203ENST00000415600 ZBTB17Q13105 803 aa20.27■□□□□ 0.84
PTPRU-203ENST00000415600 HENMT1Q5T8I9 393 aaKnown RBP20.27■□□□□ 0.84
PTPRU-203ENST00000415600 SPOCD1Q6ZMY3 1216 aa20.27■□□□□ 0.84
PTPRU-203ENST00000415600 RFLNAQ6ZTI6 216 aa20.27■□□□□ 0.84
PTPRU-203ENST00000415600 TRIM74Q86UV6 250 aa20.27■□□□□ 0.84
PTPRU-203ENST00000415600 SLITRK4Q8IW52 837 aa20.27■□□□□ 0.84
PTPRU-203ENST00000415600 NAGSQ8N159 534 aa20.27■□□□□ 0.84
PTPRU-203ENST00000415600 IFT81Q8WYA0 676 aa20.27■□□□□ 0.84
PTPRU-203ENST00000415600 SH3KBP1Q96B97 665 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms