RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 RNF215Q9Y6U7 377 aa9.52□□□□□ -0.89
LINC01090-201ENST00000415357 SCN8AQ9UQD0 1980 aa9.52□□□□□ -0.89
LINC01090-201ENST00000415357 RP1P56715 2156 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 ITPR1Q14643 2758 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 LOC285095A0A1B0GVY8 99 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 A0A1W2PNU3 283 aaPredicted RBP9.51□□□□□ -0.89
LINC01090-201ENST00000415357 A0A1W2PQM1 296 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 BUD23O43709 281 aaKnown RBP9.51□□□□□ -0.89
LINC01090-201ENST00000415357 TLX3O43711 291 aaPredicted RBP9.51□□□□□ -0.89
LINC01090-201ENST00000415357 BRINP1O60477 761 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 DNAJC6O75061 913 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 USP12O75317 370 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 TJP3O95049 919 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 EML2O95834 649 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 AGTP01019 485 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 MPOP05164 745 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 FGF1P05230 155 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 RPLP0P05388 317 aaKnown RBP9.51□□□□□ -0.89
LINC01090-201ENST00000415357 PYGLP06737 847 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 BPIP17213 487 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 CETN2P41208 172 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 ACTR1BP42025 376 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 GSDMDP57764 484 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 ACTR1AP61163 376 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 HLTFQ14527 1009 aaKnown RBP eCLIP9.51□□□□□ -0.89
LINC01090-201ENST00000415357 RTP5Q14D33 572 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 SLC1A5Q15758 541 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 ISXQ2M1V0 245 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 PYCR3Q53H96 274 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 C3orf38Q5JPI3 329 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 ZNF569Q5MCW4 686 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 ANKRD20A2Q5SQ80 823 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 CERCAMQ5T4B2 595 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 ANKRD20A1Q5TYW2 823 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 ANKRD20A3Q5VUR7 823 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 CCDC70Q6NSX1 233 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 OGFOD3Q6PK18 319 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 RBM44Q6ZP01 1051 aaKnown RBP9.51□□□□□ -0.89
LINC01090-201ENST00000415357 TMC3Q7Z5M5 1100 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 B3GNT8Q7Z7M8 397 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 GALNT13Q8IUC8 556 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 SYCE1Q8N0S2 351 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 ZNF295-AS1Q8N0V1 137 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 CACTIN-AS1Q8N1I8 211 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 TXLNBQ8N3L3 684 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 TTC30BQ8N4P2 665 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 UBL4BQ8N7F7 174 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 BLOC1S5Q8TDH9 187 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 ZDHHC1Q8WTX9 485 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 SCARF2Q96GP6 870 aaPredicted RBP9.51□□□□□ -0.89
LINC01090-201ENST00000415357 ATXN7L3BQ96GX2 97 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 VAT1Q99536 393 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 APOL2Q9BQE5 337 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 FICDQ9BVA6 458 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 NRSN2Q9GZP1 204 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 CDH19Q9H159 772 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 CUEDC1Q9NWM3 386 aaPredicted RBP9.51□□□□□ -0.89
LINC01090-201ENST00000415357 DKK4Q9UBT3 224 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 ZNHIT2Q9UHR6 403 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 TRHDEQ9UKU6 1024 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 ATXN7L1Q9ULK2 861 aaPredicted RBP9.51□□□□□ -0.89
LINC01090-201ENST00000415357 GUCA1BQ9UMX6 200 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 ENTPD2Q9Y5L3 495 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 PKD1L2Q7Z442 2459 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 ANKRD11Q6UB99 2663 aaPredicted RBP9.51□□□□□ -0.89
LINC01090-201ENST00000415357 NBEAQ8NFP9 2946 aa9.51□□□□□ -0.89
LINC01090-201ENST00000415357 APC2O95996 2303 aa9.5□□□□□ -0.89
LINC01090-201ENST00000415357 TRBV23OR9-2A0A075B6M9 112 aa9.5□□□□□ -0.89
LINC01090-201ENST00000415357 RGSL1A5PLK6 1076 aa9.5□□□□□ -0.89
LINC01090-201ENST00000415357 MIF4GDA9UHW6 222 aaKnown RBP9.5□□□□□ -0.89
LINC01090-201ENST00000415357 AGRPO00253 132 aa9.5□□□□□ -0.89
LINC01090-201ENST00000415357 NTN3O00634 580 aaPredicted RBP9.5□□□□□ -0.89
LINC01090-201ENST00000415357 ARHGAP6O43182 974 aa9.5□□□□□ -0.89
LINC01090-201ENST00000415357 GPR39O43194 453 aa9.5□□□□□ -0.89
LINC01090-201ENST00000415357 MTX2O75431 263 aa9.5□□□□□ -0.89
LINC01090-201ENST00000415357 ECEL1O95672 775 aa9.5□□□□□ -0.89
LINC01090-201ENST00000415357 PTMAP06454 111 aaKnown RBP9.5□□□□□ -0.89
LINC01090-201ENST00000415357 GLB1P16278 677 aa9.5□□□□□ -0.89
LINC01090-201ENST00000415357 DCDC1P59894 354 aa9.5□□□□□ -0.89
LINC01090-201ENST00000415357 GABREP78334 506 aa9.5□□□□□ -0.89
LINC01090-201ENST00000415357 KLF1Q13351 362 aaPredicted RBP9.5□□□□□ -0.89
LINC01090-201ENST00000415357 MPP3Q13368 585 aa9.5□□□□□ -0.89
LINC01090-201ENST00000415357 SPIDRQ14159 915 aa9.5□□□□□ -0.89
LINC01090-201ENST00000415357 ELOAQ14241 798 aaKnown RBP9.5□□□□□ -0.89
LINC01090-201ENST00000415357 PTPRCAPQ14761 206 aa9.5□□□□□ -0.89
LINC01090-201ENST00000415357 PLA2G4EQ3MJ16 856 aa9.5□□□□□ -0.89
LINC01090-201ENST00000415357 KHDC1Q4VXA5 237 aaKnown RBP9.5□□□□□ -0.89
LINC01090-201ENST00000415357 C19orf48Q6RUI8 117 aa9.5□□□□□ -0.89
LINC01090-201ENST00000415357 TREML4Q6UXN2 200 aa9.5□□□□□ -0.89
LINC01090-201ENST00000415357 CHST15Q7LFX5 561 aaPredicted RBP9.5□□□□□ -0.89
LINC01090-201ENST00000415357 CCNJLQ8IV13 435 aa9.5□□□□□ -0.89
LINC01090-201ENST00000415357 RAVER1Q8IY67 606 aaKnown RBP9.5□□□□□ -0.89
LINC01090-201ENST00000415357 NAGSQ8N159 534 aa9.5□□□□□ -0.89
LINC01090-201ENST00000415357 TRAM1L1Q8N609 369 aa9.5□□□□□ -0.89
LINC01090-201ENST00000415357 ATG4AQ8WYN0 398 aa9.5□□□□□ -0.89
LINC01090-201ENST00000415357 HES6Q96HZ4 224 aa9.5□□□□□ -0.89
LINC01090-201ENST00000415357 SPATA13Q96N96 652 aa9.5□□□□□ -0.89
LINC01090-201ENST00000415357 FSD1LQ9BXM9 530 aa9.5□□□□□ -0.89
LINC01090-201ENST00000415357 FOXP3Q9BZS1 431 aa9.5□□□□□ -0.89
LINC01090-201ENST00000415357 OR2AG1Q9H205 316 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms