RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 CYP2A7P20853 494 aa20.26■□□□□ 0.83
AP1S3-205ENST00000415298 PSMA3P25788 255 aa20.26■□□□□ 0.83
AP1S3-205ENST00000415298 PLEKHG6Q3KR16 790 aa20.26■□□□□ 0.83
AP1S3-205ENST00000415298 LETMD1Q6P1Q0 360 aa20.26■□□□□ 0.83
AP1S3-205ENST00000415298 ARHGAP36Q6ZRI8 547 aa20.26■□□□□ 0.83
AP1S3-205ENST00000415298 SPATC1Q76KD6 591 aa20.26■□□□□ 0.83
AP1S3-205ENST00000415298 HDDC2Q7Z4H3 204 aa20.26■□□□□ 0.83
AP1S3-205ENST00000415298 PRSS42Q7Z5A4 293 aa20.26■□□□□ 0.83
AP1S3-205ENST00000415298 AMIGO1Q86WK6 493 aa20.26■□□□□ 0.83
AP1S3-205ENST00000415298 TBC1D20Q96BZ9 403 aa20.26■□□□□ 0.83
AP1S3-205ENST00000415298 TEKT5Q96M29 485 aa20.26■□□□□ 0.83
AP1S3-205ENST00000415298 DACH2Q96NX9 599 aa20.26■□□□□ 0.83
AP1S3-205ENST00000415298 PPA2Q9H2U2 334 aa20.26■□□□□ 0.83
AP1S3-205ENST00000415298 UBQLN1Q9UMX0 589 aaKnown RBP20.26■□□□□ 0.83
AP1S3-205ENST00000415298 PCDHB7Q9Y5E2 793 aa20.26■□□□□ 0.83
AP1S3-205ENST00000415298 FSCN2O14926 492 aa20.26■□□□□ 0.83
AP1S3-205ENST00000415298 EEF1B2P24534 225 aaKnown RBP20.26■□□□□ 0.83
AP1S3-205ENST00000415298 HIST2H2ACQ16777 129 aaPredicted RBP20.26■□□□□ 0.83
AP1S3-205ENST00000415298 UGP2Q16851 508 aa20.26■□□□□ 0.83
AP1S3-205ENST00000415298 KIAA1324Q6UXG2 1013 aaKnown RBP20.26■□□□□ 0.83
AP1S3-205ENST00000415298 BEST2Q8NFU1 509 aa20.26■□□□□ 0.83
AP1S3-205ENST00000415298 BTN2A3PQ96KV6 586 aa20.26■□□□□ 0.83
AP1S3-205ENST00000415298 NT5C1BQ96P26 610 aa20.26■□□□□ 0.83
AP1S3-205ENST00000415298 BRD7Q9NPI1 651 aa20.26■□□□□ 0.83
AP1S3-205ENST00000415298 TMEM161AQ9NX61 479 aa20.26■□□□□ 0.83
AP1S3-205ENST00000415298 SLCO3A1Q9UIG8 710 aa20.26■□□□□ 0.83
AP1S3-205ENST00000415298 TINAGQ9UJW2 476 aa20.26■□□□□ 0.83
AP1S3-205ENST00000415298 DERAQ9Y315 318 aa20.26■□□□□ 0.83
AP1S3-205ENST00000415298 CASTOR2A6NHX0 329 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 ZNF487B1APH4 448 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 PLD2O14939 933 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 GNAO1P09471 354 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 MBL2P11226 248 aaPredicted RBP20.25■□□□□ 0.83
AP1S3-205ENST00000415298 KELP23276 732 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 AP1S2P56377 157 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 NME5P56597 212 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 GPX6P59796 221 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 BNC1Q01954 994 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 BAMBIQ13145 260 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 RIN1Q13671 783 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 DRAP1Q14919 205 aaPredicted RBP20.25■□□□□ 0.83
AP1S3-205ENST00000415298 ERMP1Q7Z2K6 904 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 NT5DC4Q86YG4 428 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 ZNF280BQ86YH2 543 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 OR2T34Q8NGX1 318 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 RHOXF1Q8NHV9 184 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 E2F7Q96AV8 911 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 KLHL32Q96NJ5 620 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 YTHDF1Q9BYJ9 559 aaKnown RBP20.25■□□□□ 0.83
AP1S3-205ENST00000415298 VPS28Q9UK41 221 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 SH3D21A4FU49 640 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 UGT2B11O75310 529 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 BCAS2O75934 225 aaPredicted RBP20.25■□□□□ 0.83
AP1S3-205ENST00000415298 SERPINB10P48595 397 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 OR2B6P58173 313 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 DEFB103AP81534 67 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 TNK2Q07912 1038 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 ELOAQ14241 798 aaKnown RBP20.25■□□□□ 0.83
AP1S3-205ENST00000415298 DDR2Q16832 855 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 ZNF699Q32M78 642 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 C9orf57Q5W0N0 161 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 LIMS2Q7Z4I7 341 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 PIK3C3Q8NEB9 887 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 C12orf57Q99622 126 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 THAP2Q9H0W7 228 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 C8orf33Q9H7E9 229 aaPredicted RBP20.25■□□□□ 0.83
AP1S3-205ENST00000415298 CYP4F12Q9HCS2 524 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 IFT46Q9NQC8 304 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 CHST7Q9NS84 486 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 PACSIN3Q9UKS6 424 aa20.25■□□□□ 0.83
AP1S3-205ENST00000415298 LOC100653049A0A140TA62 436 aa20.24■□□□□ 0.83
AP1S3-205ENST00000415298 SAGE2PA6NJ88 616 aa20.24■□□□□ 0.83
AP1S3-205ENST00000415298 KRT34O76011 436 aa20.24■□□□□ 0.83
AP1S3-205ENST00000415298 MT-ND3P03897 115 aa20.24■□□□□ 0.83
AP1S3-205ENST00000415298 HLCSP50747 726 aa20.24■□□□□ 0.83
AP1S3-205ENST00000415298 ZNF267Q14586 743 aaPredicted RBP20.24■□□□□ 0.83
AP1S3-205ENST00000415298 CRTC3Q6UUV7 619 aa20.24■□□□□ 0.83
AP1S3-205ENST00000415298 SCARA5Q6ZMJ2 495 aa20.24■□□□□ 0.83
AP1S3-205ENST00000415298 DPY19L3Q6ZPD9 716 aa20.24■□□□□ 0.83
AP1S3-205ENST00000415298 VN1R5Q7Z5H4 357 aa20.24■□□□□ 0.83
AP1S3-205ENST00000415298 GLYCTKQ8IVS8 523 aa20.24■□□□□ 0.83
AP1S3-205ENST00000415298 UBQLNLQ8IYU4 475 aa20.24■□□□□ 0.83
AP1S3-205ENST00000415298 ST8SIA2Q92186 375 aa20.24■□□□□ 0.83
AP1S3-205ENST00000415298 HPDLQ96IR7 371 aa20.24■□□□□ 0.83
AP1S3-205ENST00000415298 CDADC1Q9BWV3 514 aa20.24■□□□□ 0.83
AP1S3-205ENST00000415298 TDRD15B5MCY1 1934 aaKnown RBP20.24■□□□□ 0.83
AP1S3-205ENST00000415298 E2F3O00716 465 aa20.24■□□□□ 0.83
AP1S3-205ENST00000415298 CALCAP01258 141 aa20.24■□□□□ 0.83
AP1S3-205ENST00000415298 WEE2P0C1S8 567 aa20.24■□□□□ 0.83
AP1S3-205ENST00000415298 SFTPCP11686 197 aa20.24■□□□□ 0.83
AP1S3-205ENST00000415298 STMN1P16949 149 aa20.24■□□□□ 0.83
AP1S3-205ENST00000415298 COMTP21964 271 aa20.24■□□□□ 0.83
AP1S3-205ENST00000415298 RFC2P35250 354 aa20.24■□□□□ 0.83
AP1S3-205ENST00000415298 CDH8P55286 799 aa20.24■□□□□ 0.83
AP1S3-205ENST00000415298 GLB1LQ6UWU2 654 aa20.24■□□□□ 0.83
AP1S3-205ENST00000415298 TSPYL5Q86VY4 417 aaPredicted RBP20.24■□□□□ 0.83
AP1S3-205ENST00000415298 OLIG1Q8TAK6 271 aa20.24■□□□□ 0.83
AP1S3-205ENST00000415298 MLPHQ9BV36 600 aaPredicted RBP20.24■□□□□ 0.83
AP1S3-205ENST00000415298 STOML2Q9UJZ1 356 aa20.24■□□□□ 0.83
AP1S3-205ENST00000415298 PMF1-BGLAPU3KQ54 211 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms