RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 PRMT8Q9NR22 394 aaPredicted RBP9.9□□□□□ -0.83
DDB1-202ENST00000414411 THAP1Q9NVV9 213 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 SPATA6Q9NWH7 488 aaPredicted RBP9.9□□□□□ -0.83
DDB1-202ENST00000414411 NOP53Q9NZM5 478 aaKnown RBP9.9□□□□□ -0.83
DDB1-202ENST00000414411 HACD3Q9P035 362 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 B4GALT6Q9UBX8 382 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 DCDC2Q9UHG0 476 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 FADS3Q9Y5Q0 445 aa9.9□□□□□ -0.83
DDB1-202ENST00000414411 EML5Q05BV3 1969 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 ZNF318Q5VUA4 2279 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 A0A0U1RQS6 177 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 MROH6A6NGR9 719 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 SLC7A4O43246 635 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 PLRG1O43660 514 aaKnown RBP9.89□□□□□ -0.83
DDB1-202ENST00000414411 LDB2O43679 373 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 RECKO95980 971 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 ACADMP11310 421 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 FGF3P11487 239 aaPredicted RBP9.89□□□□□ -0.83
DDB1-202ENST00000414411 LHCGRP22888 699 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 PSMA3P25788 255 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 HMGCLP35914 325 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 LIMK2P53671 638 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 IRX4P78413 519 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 SEMG2Q02383 582 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 PTSQ03393 145 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 SFSWAPQ12872 951 aaKnown RBP9.89□□□□□ -0.83
DDB1-202ENST00000414411 RALGDSQ12967 914 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 PCLAFQ15004 111 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 TMEM52BQ4KMG9 183 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 ANKRD20A4Q4UJ75 823 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 ARMC3Q5W041 872 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 C16orf46Q6P387 395 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 USP45Q70EL2 814 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 C11orf96Q7Z7L8 435 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 TSPAN33Q86UF1 283 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 C1orf210Q8IVY1 113 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 TTC30BQ8N4P2 665 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 PAF1Q8N7H5 531 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 RANBP9Q96S59 729 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 RBBP8Q99708 897 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 BTBD10Q9BSF8 475 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 TACO1Q9BSH4 297 aaKnown RBP9.89□□□□□ -0.83
DDB1-202ENST00000414411 CADM1Q9BY67 442 aaKnown RBP9.89□□□□□ -0.83
DDB1-202ENST00000414411 MARCOQ9UEW3 520 aaPredicted RBP9.89□□□□□ -0.83
DDB1-202ENST00000414411 MCM8Q9UJA3 840 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 ABCA7Q8IZY2 2146 aa9.89□□□□□ -0.83
DDB1-202ENST00000414411 PLXND1Q9Y4D7 1925 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 CCDC163A0A0D9SF12 145 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 CAPN14A8MX76 684 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 A8MX80 341 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 PEX11AO75192 247 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 CLDN7O95471 211 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 ANP32DO95626 131 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 PROCP04070 461 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 NUDT7P0C024 238 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 HOXB3P14651 431 aaPredicted RBP9.88□□□□□ -0.83
DDB1-202ENST00000414411 GM2AP17900 193 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 XPAP23025 273 aaPredicted RBP9.88□□□□□ -0.83
DDB1-202ENST00000414411 TYK2P29597 1187 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 AVPR2P30518 371 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 VIPR1P32241 457 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 PXNP49023 591 aaPredicted RBP9.88□□□□□ -0.83
DDB1-202ENST00000414411 AQP5P55064 265 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 ELP6Q0PNE2 266 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 POU6F1Q14863 301 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 TAF1AQ15573 450 aaPredicted RBP9.88□□□□□ -0.83
DDB1-202ENST00000414411 PCID2Q5JVF3 399 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 WASHC2DQ5SRD0 308 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 ERAP2Q6P179 960 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 LIPIQ6XZB0 460 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 LYSMD3Q7Z3D4 306 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 PGBD3Q8N328 593 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 DTWD2Q8NBA8 298 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 PPP1R14CQ8TAE6 165 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 BLOC1S5Q8TDH9 187 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 C19orf43Q9BQ61 176 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 SIKE1Q9BRV8 207 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 KIFC1Q9BW19 673 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 RNPEPL1Q9HAU8 725 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 CHRAC1Q9NRG0 131 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 SNX15Q9NRS6 342 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 ARMCX1Q9P291 453 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 ITM2BQ9Y287 266 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 NCKAP1Q9Y2A7 1128 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 C15orf41Q9Y2V0 281 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 COMMD10Q9Y6G5 202 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 CACNA1HO95180 2353 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 MAGEB16A2A368 324 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 H0Y858 1186 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 TSPAN6O43657 245 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 ZNF217O75362 1048 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 SERPINE1P05121 402 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 KITP10721 976 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 ESRRAP11474 423 aaPredicted RBP9.88□□□□□ -0.83
DDB1-202ENST00000414411 CYP2A6P11509 494 aaPredicted RBP9.88□□□□□ -0.83
DDB1-202ENST00000414411 ZNF30P17039 623 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 NFKBIAP25963 317 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 ACSL1P33121 698 aa9.88□□□□□ -0.83
DDB1-202ENST00000414411 SPRP35270 261 aaPredicted RBP9.88□□□□□ -0.83
DDB1-202ENST00000414411 SERPINB8P50452 374 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms